RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 MS4A6AQ9H2W1 248 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 RBKSQ9H477 322 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 UBQLN4Q9NRR5 601 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 CA10Q9NS85 328 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM100Q9NV29 134 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 LAMTOR2Q9Y2Q5 125 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 INSIG2Q9Y5U4 225 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 MYH8P13535 1937 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 NUP210Q8TEM1 1887 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ROBO1Q9Y6N7 1651 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 EFCAB9A8MZ26 197 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 F5H5K5 113 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 SIRPB1O00241 398 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 TAX1BP3O14907 124 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 PLA2G10O15496 165 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 HIST1H2BKO60814 126 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 SNAPC5O75971 98 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 HIST1H2BJP06899 126 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 GIPP09681 153 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ATF1P18846 271 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 RAB5AP20339 215 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 HIST1H2BOP23527 126 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 RPS12P25398 132 aaKnown RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 S100GP29377 79 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 HIST1H2BBP33778 126 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 GLRXP35754 106 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 KLK7P49862 253 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 POLR2HP52434 150 aaKnown RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 PIGPP57054 158 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 HIST1H2BDP58876 126 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 HIST1H2BCP62807 126 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 HIST1H1AQ02539 215 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 HIST2H2BEQ16778 126 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ATP6AP1LQ52LC2 224 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 SPRNQ5BIV9 151 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 TFDP3Q5H9I0 405 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 SOHLH1Q5JUK2 328 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 LCE3CQ5T5A8 94 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 GLYATQ6IB77 296 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 AGTRAPQ6RW13 159 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 OAFQ86UD1 273 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ZCCHC24Q8N2G6 241 aaKnown RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 Q8N976 141 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 GPR26Q8NDV2 337 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 OR11H7Q8NGC8 314 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 OR51Q1Q8NH59 317 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 CHCHD10Q8WYQ3 142 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 HIST1H2BHQ93079 126 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ARL11Q969Q4 196 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 MAGOHBQ96A72 148 aaKnown RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 IMP4Q96G21 291 aaKnown RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 SMARCD1Q96GM5 515 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 HIST1H4GQ99525 98 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 HIST1H2BNQ99877 126 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 HIST1H2BMQ99879 126 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 C20orf27Q9GZN8 174 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 SH3BGRL3Q9H299 93 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 MAP1LC3AQ9H492 121 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 RNF167Q9H6Y7 350 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 NMRAL1Q9HBL8 299 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 SH2D2AQ9NP31 389 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ACP6Q9NPH0 428 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 RBM22Q9NW64 420 aaKnown RBP eCLIP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 MARCH5Q9NX47 278 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 IL36GQ9NZH8 169 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 OR5AC2Q9NZP5 309 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 DOK5Q9P104 306 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 YTHDF2Q9Y5A9 579 aaKnown RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 PCYT1BQ9Y5K3 369 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 CRB1P82279 1406 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 NCKAP5O14513 1909 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 CPAMD8Q8IZJ3 1885 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 DENND4CQ5VZ89 1909 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 BORCS7-ASMTA0A0B4J1R7 106 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 FAM183AA6NL82 134 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 K7EMT4 169 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 MRPS12O15235 138 aaKnown RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 OR2T1O43869 369 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 OR7C2O60412 319 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 TNFSF13O75888 250 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 LGALS2P05162 132 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 LINC00869P0C866 280 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF708P17019 499 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 NPY1RP25929 384 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 RPL12P30050 165 aaKnown RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 TFPI2P48307 235 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 CX3CR1P49238 355 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 DIO3P55073 304 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 RHOAP61586 193 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 MEF2BQ02080 365 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-212ENST00000557538 GNMTQ14749 295 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF141Q15928 474 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 AKR1C8PQ5T2L2 129 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF773Q6PK81 442 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 Q6ZRU5 148 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 FA2HQ7L5A8 372 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 OR8I2Q8N0Y5 310 aa1.19□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF740Q8NDX6 193 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms