RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PRDM14Q9GZV8 571 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 CLEC2AQ6UVW9 174 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 MRPL20Q9BYC9 149 aaKnown RBP7.67□□□□□ -1.18
SYNE3-205ENST00000557275 SBK3P0C264 359 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 PNLIPP16233 465 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 NKX2-6A6NCS4 301 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 ZNF750Q32MQ0 723 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 FOXB2Q5VYV0 432 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 DMKNQ6E0U4 476 aaPredicted RBP7.67□□□□□ -1.18
SYNE3-205ENST00000557275 CSPG4Q6UVK1 2322 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 VEGFBP49765 207 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 ERVK11-1P61568 191 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 PSG6Q00889 435 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 HSD52Q0P140 79 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 DLX4Q92988 240 aaPredicted RBP7.67□□□□□ -1.18
SYNE3-205ENST00000557275 TINAGQ9UJW2 476 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 ARFGEF1Q9Y6D6 1849 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 PAQR9Q6ZVX9 377 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 PNKDQ8N490 385 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 C17orf47Q8NEP4 570 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 IL36RNQ9UBH0 155 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 DNAJC25-GNG10A0A024R161 153 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 TRBV5-4A0A0C4DH59 114 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 PRSS36Q5K4E3 855 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 CRYBG1Q9Y4K1 1723 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 C21orf140B9A014 251 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 POU2AF1Q16633 256 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 IGHV3-15A0A0B4J1V0 119 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 TSPO2Q5TGU0 170 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 DLEC1Q9Y238 1755 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 NRAPQ86VF7 1730 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 TMSB15BA0A087X1C1 80 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 EDIL3O43854 480 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 PRF1P14222 555 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 FSTP19883 344 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 NPPCP23582 126 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 CST9LQ9H4G1 147 aa7.67□□□□□ -1.18
SYNE3-205ENST00000557275 hCG_38984A0A1B0GV85 526 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 GOLT1AQ6ZVE7 132 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 EEF1AKMT3Q96AZ1 226 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 CHCHD1Q96BP2 118 aaKnown RBP7.66□□□□□ -1.18
SYNE3-205ENST00000557275 MARCH11A6NNE9 402 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 ABHD17AQ96GS6 310 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 PRSS12P56730 875 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 FAM74A4Q5TZK3 123 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 IGHV3-64DA0A0J9YX35 117 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 DPM2O94777 84 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 P2RY6Q15077 328 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 LAMTOR2Q9Y2Q5 125 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 TSC2P49815 1807 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 RBMY1FQ15415 496 aaKnown RBP7.66□□□□□ -1.18
SYNE3-205ENST00000557275 CITED1Q99966 193 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 CXCL3P19876 107 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 DEFB109BQ30KR1 87 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 FIZ1Q96SL8 496 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 FBLN7Q53RD9 439 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 SRSF12Q8WXF0 261 aaKnown RBP7.66□□□□□ -1.18
SYNE3-205ENST00000557275 MGST3O14880 152 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 MYOD1P15172 320 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 UNQ9370/PRO34162Q6UXP9 181 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 SAXO1Q8IYX7 474 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 TMEM171Q8WVE6 324 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 MEGF9Q9H1U4 602 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 KLF12Q9Y4X4 402 aa7.66□□□□□ -1.18
SYNE3-205ENST00000557275 BRCA1P38398 1863 aaKnown RBP7.66□□□□□ -1.18
SYNE3-205ENST00000557275 TP53INP2Q8IXH6 220 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 NMBP08949 121 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 SRFP11831 508 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 TNFRSF9Q07011 255 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 SRSF1Q07955 248 aaKnown RBP eCLIP7.65□□□□□ -1.18
SYNE3-205ENST00000557275 BIVMQ86UB2 503 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 TMEFF2Q9UIK5 374 aaPredicted RBP7.65□□□□□ -1.18
SYNE3-205ENST00000557275 ATP5G2Q06055 141 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 AMER3Q8N944 861 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 OR11H7Q8NGC8 314 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 ALKBH6Q3KRA9 238 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 ALKAL1Q6UXT8 129 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 OR4D11Q8NGI4 311 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 NDUFAF3Q9BU61 184 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 TUBA4BQ9H853 241 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 PTPRDP23468 1912 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 TNFSF14O43557 240 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 PTGDSP41222 190 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 TRBV23-1A0A0A0MS06 115 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 GFRA1P56159 465 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 KRTCAP3Q53RY4 240 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 LYZL2Q7Z4W2 148 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 RLN3Q8WXF3 142 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 SMIM8Q96KF7 97 aa7.65□□□□□ -1.18
SYNE3-205ENST00000557275 PAPPA2Q9BXP8 1791 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 TMEM8BA6NDV4 472 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 FGF22Q9HCT0 170 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 CTLA4P16410 223 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 CCL27Q9Y4X3 112 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 C9orf172C9J069 976 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 J3QW42 95 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 PEX11BO96011 259 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 TBR1Q16650 682 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 RASL11AQ6T310 242 aa7.65□□□□□ -1.19
SYNE3-205ENST00000557275 ZNF793Q6ZN11 406 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms