RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 TMEM187Q14656 261 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 OXA1LQ15070 435 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 MMDQ15546 238 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 SLC9A3R2Q15599 337 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 SP6Q3SY56 376 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 VMA21Q3ZAQ7 101 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 ZNF585BQ52M93 769 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 ZNF695Q8IW36 515 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 LGI3Q8N145 548 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 COQ8AQ8NI60 647 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 VSTM2AQ8TAG5 236 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 CASTOR1Q8WTX7 329 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 GLYATL2Q8WU03 294 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 CHPT1Q8WUD6 406 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 IL22RA2Q969J5 263 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 R3HDM4Q96D70 268 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 RBM14Q96PK6 669 aaKnown RBP7.79□□□□□ -1.16
TMEM260-213ENST00000556929 SLC25A33Q9BSK2 321 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 RAB18Q9NP72 206 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 TNFRSF19Q9NS68 423 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 VPREB3Q9UKI3 123 aa7.79□□□□□ -1.16
TMEM260-213ENST00000556929 HIVEP2P31629 2446 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 DUXBA0A1W2PPF3 345 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 A6NDX4 124 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 NCBP2LA6PVI3 153 aaKnown RBP7.78□□□□□ -1.16
TMEM260-213ENST00000556929 M0QZK8 103 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 NBR2O15453 112 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 TCF21O43680 179 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 DUS4LO95620 317 aaKnown RBP7.78□□□□□ -1.16
TMEM260-213ENST00000556929 CDS2O95674 445 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 VSIG10L2P0DP72 767 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 AKR1C2P52895 323 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 HILS1P60008 231 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 PLGLAQ15195 96 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 TMEM268Q5VZI3 342 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 Q8N6K4 173 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 DMBX1Q8NFW5 382 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 NPBQ8NG41 125 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 RNASE11Q8TAA1 199 aaKnown RBP7.78□□□□□ -1.16
TMEM260-213ENST00000556929 ZNF431Q8TF32 576 aaPredicted RBP7.78□□□□□ -1.16
TMEM260-213ENST00000556929 RBPMSQ93062 196 aaKnown RBP7.78□□□□□ -1.16
TMEM260-213ENST00000556929 RRNAD1Q96FB5 475 aaKnown RBP7.78□□□□□ -1.16
TMEM260-213ENST00000556929 TMEM56Q96MV1 263 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 PHB2Q99623 299 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 MOB4Q9Y3A3 225 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 TMEM56-RWDD3S4R434 201 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 CSPG4Q6UVK1 2322 aa7.78□□□□□ -1.16
TMEM260-213ENST00000556929 A0A0B4J2A0 478 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 DNAJC9-AS1A6NH13 148 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 MARCH11A6NNE9 402 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 SNRPGP15A8MWD9 76 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 CLDN34H7C241 214 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 RRHO14718 337 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 FGF16O43320 207 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 CREBL2O60519 120 aaPredicted RBP7.77□□□□□ -1.17
TMEM260-213ENST00000556929 NDUFA3O95167 84 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 KRASP01116 189 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 UBE2KP61086 200 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 PSG5Q15238 335 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 POU2AF1Q16633 256 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 SSX9Q7RTT3 188 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 H2BFWTQ7Z2G1 175 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 TMEM219Q86XT9 240 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 SELENOHQ8IZQ5 122 aaKnown RBP7.77□□□□□ -1.17
TMEM260-213ENST00000556929 C12orf45Q8N5I9 185 aaPredicted RBP7.77□□□□□ -1.17
TMEM260-213ENST00000556929 LRTM2Q8N967 370 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 TEX45Q8NA69 505 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 OR52B4Q8NGK2 314 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 RITA1Q96K30 269 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 RHOVQ96L33 236 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 RASL11BQ9BPW5 248 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 SEC22CQ9BRL7 303 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 METTL1Q9UBP6 276 aaKnown RBP7.77□□□□□ -1.17
TMEM260-213ENST00000556929 SHPKQ9UHJ6 478 aa7.77□□□□□ -1.17
TMEM260-213ENST00000556929 SRRM4A7MD48 611 aaKnown RBP7.76□□□□□ -1.17
TMEM260-213ENST00000556929 TRIM77I1YAP6 450 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 SLC25A17O43808 307 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 OR2A4O95047 310 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 IGKV1-39P01597 117 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 IGLV2-23P01705 113 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 IGKV1D-39P04432 117 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 VDAC1P21796 283 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 LORP23490 312 aaPredicted RBP7.76□□□□□ -1.17
TMEM260-213ENST00000556929 CNTFRP26992 372 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 G6PCP35575 357 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 F2RL1P55085 397 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 TATDN3Q17R31 274 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 ANKRD55Q3KP44 614 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 OR4A47Q6IF82 309 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 FAM219AQ8IW50 185 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 CADM3Q8N126 398 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 SLC35G3Q8N808 338 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 OR4A5Q8NH83 315 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 MITD1Q8WV92 249 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 LSM10Q969L4 123 aaKnown RBP7.76□□□□□ -1.17
TMEM260-213ENST00000556929 RBMXL1Q96E39 390 aaKnown RBP7.76□□□□□ -1.17
TMEM260-213ENST00000556929 SEC22AQ96IW7 307 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 OR2A7Q96R45 310 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 CHIAQ9BZP6 476 aa7.76□□□□□ -1.17
TMEM260-213ENST00000556929 FBXL15Q9H469 300 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms