RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 C10orf55Q5SWW7 151 aa13.8□□□□□ -0.2
VIPAS39-209ENST00000556909 VCXQ9H320 206 aa13.8□□□□□ -0.2
VIPAS39-209ENST00000556909 SRD5A3Q9H8P0 318 aa13.8□□□□□ -0.2
VIPAS39-209ENST00000556909 A0A075B6Q4 140 aa13.79□□□□□ -0.2
VIPAS39-209ENST00000556909 SAA1P0DJI8 122 aaPredicted RBP13.79□□□□□ -0.2
VIPAS39-209ENST00000556909 RANBP1P43487 201 aa13.79□□□□□ -0.2
VIPAS39-209ENST00000556909 CDK10Q15131 360 aa13.79□□□□□ -0.2
VIPAS39-209ENST00000556909 DEFB114Q30KQ6 69 aa13.79□□□□□ -0.2
VIPAS39-209ENST00000556909 H1FOOQ8IZA3 346 aaPredicted RBP13.79□□□□□ -0.2
VIPAS39-209ENST00000556909 NECAP1Q8NC96 275 aa13.79□□□□□ -0.2
VIPAS39-209ENST00000556909 OR10R2Q8NGX6 335 aa13.79□□□□□ -0.2
VIPAS39-209ENST00000556909 SPIN2AQ99865 258 aa13.79□□□□□ -0.2
VIPAS39-209ENST00000556909 SPIN2BQ9BPZ2 258 aa13.79□□□□□ -0.2
VIPAS39-209ENST00000556909 ZC4H2Q9NQZ6 224 aa13.79□□□□□ -0.2
VIPAS39-209ENST00000556909 C2orf70A6NJV1 201 aa13.78□□□□□ -0.2
VIPAS39-209ENST00000556909 OR11H12B2RN74 326 aa13.78□□□□□ -0.2
VIPAS39-209ENST00000556909 PPP5D1E7EU14 171 aa13.78□□□□□ -0.2
VIPAS39-209ENST00000556909 RAB27BO00194 218 aa13.78□□□□□ -0.2
VIPAS39-209ENST00000556909 CREBL2O60519 120 aaPredicted RBP13.78□□□□□ -0.2
VIPAS39-209ENST00000556909 OR2J3O76001 311 aa13.78□□□□□ -0.2
VIPAS39-209ENST00000556909 ACTL6BO94805 426 aa13.78□□□□□ -0.2
VIPAS39-209ENST00000556909 HIST1H1DP16402 221 aaKnown RBP13.78□□□□□ -0.2
VIPAS39-209ENST00000556909 GADD45AP24522 165 aa13.78□□□□□ -0.2
VIPAS39-209ENST00000556909 PSMD7P51665 324 aa13.78□□□□□ -0.2
VIPAS39-209ENST00000556909 C15orf32Q32M92 178 aa13.78□□□□□ -0.2
VIPAS39-209ENST00000556909 MMD2Q8IY49 270 aa13.78□□□□□ -0.2
VIPAS39-209ENST00000556909 TTC9CQ8N5M4 171 aa13.78□□□□□ -0.2
VIPAS39-209ENST00000556909 KCTD12Q96CX2 325 aaKnown RBP13.78□□□□□ -0.2
VIPAS39-209ENST00000556909 DMRT1Q9Y5R6 373 aa13.78□□□□□ -0.2
VIPAS39-209ENST00000556909 IGKV1D-8A0A087WSZ0 117 aa13.77□□□□□ -0.21
VIPAS39-209ENST00000556909 HLA-AP01891 365 aaKnown RBP13.77□□□□□ -0.21
VIPAS39-209ENST00000556909 FOLR2P14207 255 aa13.77□□□□□ -0.21
VIPAS39-209ENST00000556909 OR10A3P58181 314 aa13.77□□□□□ -0.21
VIPAS39-209ENST00000556909 GUCA2BQ16661 112 aa13.77□□□□□ -0.21
VIPAS39-209ENST00000556909 Q6ZS49 121 aa13.77□□□□□ -0.21
VIPAS39-209ENST00000556909 WDR89Q96FK6 387 aaPredicted RBP13.77□□□□□ -0.21
VIPAS39-209ENST00000556909 DUSP21Q9H596 190 aa13.77□□□□□ -0.21
VIPAS39-209ENST00000556909 ACOT13Q9NPJ3 140 aa13.77□□□□□ -0.21
VIPAS39-209ENST00000556909 TPRKBQ9Y3C4 175 aa13.77□□□□□ -0.21
VIPAS39-209ENST00000556909 RGS10O43665 173 aa13.76□□□□□ -0.21
VIPAS39-209ENST00000556909 FCGR3BO75015 233 aa13.76□□□□□ -0.21
VIPAS39-209ENST00000556909 KIR2DS2P43631 304 aa13.76□□□□□ -0.21
VIPAS39-209ENST00000556909 FAM209BQ5JX69 171 aa13.76□□□□□ -0.21
VIPAS39-209ENST00000556909 C19orf35Q6ZS72 473 aa13.76□□□□□ -0.21
VIPAS39-209ENST00000556909 KCTD9Q7L273 389 aa13.76□□□□□ -0.21
VIPAS39-209ENST00000556909 MGLLQ99685 303 aa13.76□□□□□ -0.21
VIPAS39-209ENST00000556909 TECRQ9NZ01 308 aaKnown RBP13.76□□□□□ -0.21
VIPAS39-209ENST00000556909 ZNF257Q9Y2Q1 563 aa13.76□□□□□ -0.21
VIPAS39-209ENST00000556909 HMX3A6NHT5 357 aa13.75□□□□□ -0.21
VIPAS39-209ENST00000556909 TEX22C9J3V5 150 aa13.75□□□□□ -0.21
VIPAS39-209ENST00000556909 LGALS9O00182 355 aa13.75□□□□□ -0.21
VIPAS39-209ENST00000556909 GGCTO75223 188 aaKnown RBP13.75□□□□□ -0.21
VIPAS39-209ENST00000556909 RAB6AP20340 208 aa13.75□□□□□ -0.21
VIPAS39-209ENST00000556909 TALDO1P37837 337 aa13.75□□□□□ -0.21
VIPAS39-209ENST00000556909 ARFRP1Q13795 201 aa13.75□□□□□ -0.21
VIPAS39-209ENST00000556909 OR2B11Q5JQS5 317 aa13.75□□□□□ -0.21
VIPAS39-209ENST00000556909 SLC25A42Q86VD7 318 aa13.75□□□□□ -0.21
VIPAS39-209ENST00000556909 ZNF645Q8N7E2 425 aa13.75□□□□□ -0.21
VIPAS39-209ENST00000556909 CACNG8Q8WXS5 425 aa13.75□□□□□ -0.21
VIPAS39-209ENST00000556909 DCUN1D5Q9BTE7 237 aa13.75□□□□□ -0.21
VIPAS39-209ENST00000556909 CENPOQ9BU64 300 aa13.75□□□□□ -0.21
VIPAS39-209ENST00000556909 ERICH4A6NGS2 130 aa13.74□□□□□ -0.21
VIPAS39-209ENST00000556909 IFITM5A6NNB3 132 aa13.74□□□□□ -0.21
VIPAS39-209ENST00000556909 J3QRK9 145 aa13.74□□□□□ -0.21
VIPAS39-209ENST00000556909 PDCD5O14737 125 aa13.74□□□□□ -0.21
VIPAS39-209ENST00000556909 OR2C1O95371 312 aa13.74□□□□□ -0.21
VIPAS39-209ENST00000556909 MAP2K4P45985 399 aa13.74□□□□□ -0.21
VIPAS39-209ENST00000556909 RPL30P62888 115 aaKnown RBP13.74□□□□□ -0.21
VIPAS39-209ENST00000556909 VKORC1L1Q8N0U8 176 aa13.74□□□□□ -0.21
VIPAS39-209ENST00000556909 CCDC90BQ9GZT6 254 aa13.74□□□□□ -0.21
VIPAS39-209ENST00000556909 ELF5Q9UKW6 265 aaPredicted RBP13.74□□□□□ -0.21
VIPAS39-209ENST00000556909 MRPS7Q9Y2R9 242 aaKnown RBP13.74□□□□□ -0.21
VIPAS39-209ENST00000556909 SELENOKQ9Y6D0 94 aa13.74□□□□□ -0.21
VIPAS39-209ENST00000556909 FRAS1Q86XX4 4008 aa13.73□□□□□ -0.21
VIPAS39-209ENST00000556909 NPIPB5A8MRT5 1133 aa13.73□□□□□ -0.21
VIPAS39-209ENST00000556909 IGLV2-14P01704 120 aa13.73□□□□□ -0.21
VIPAS39-209ENST00000556909 IGHV3-23P01764 117 aa13.73□□□□□ -0.21
VIPAS39-209ENST00000556909 DTYMKP23919 212 aa13.73□□□□□ -0.21
VIPAS39-209ENST00000556909 AQP4P55087 323 aa13.73□□□□□ -0.21
VIPAS39-209ENST00000556909 PRSS48Q7RTY5 328 aa13.73□□□□□ -0.21
VIPAS39-209ENST00000556909 CCDC140Q96MF4 163 aa13.73□□□□□ -0.21
VIPAS39-209ENST00000556909 OR51E2Q9H255 320 aa13.73□□□□□ -0.21
VIPAS39-209ENST00000556909 FBXL7Q9UJT9 491 aa13.73□□□□□ -0.21
VIPAS39-209ENST00000556909 RBMX2Q9Y388 322 aaKnown RBP13.73□□□□□ -0.21
VIPAS39-209ENST00000556909 PRELID3BQ9Y3B1 194 aa13.73□□□□□ -0.21
VIPAS39-209ENST00000556909 TRAV1-2A0A0B4J238 106 aa13.72□□□□□ -0.21
VIPAS39-209ENST00000556909 TMEM213A2RRL7 107 aa13.72□□□□□ -0.21
VIPAS39-209ENST00000556909 METTL21EPA6NDL7 271 aa13.72□□□□□ -0.21
VIPAS39-209ENST00000556909 KBTBD11O94819 623 aa13.72□□□□□ -0.21
VIPAS39-209ENST00000556909 CD36P16671 472 aa13.72□□□□□ -0.21
VIPAS39-209ENST00000556909 CBLN1P23435 193 aa13.72□□□□□ -0.21
VIPAS39-209ENST00000556909 NFYAP23511 347 aaPredicted RBP13.72□□□□□ -0.21
VIPAS39-209ENST00000556909 SSX1Q16384 188 aa13.72□□□□□ -0.21
VIPAS39-209ENST00000556909 SLC16A13Q7RTY0 426 aa13.72□□□□□ -0.21
VIPAS39-209ENST00000556909 GPHB5Q86YW7 130 aa13.72□□□□□ -0.21
VIPAS39-209ENST00000556909 TMEM61Q8N0U2 210 aa13.72□□□□□ -0.21
VIPAS39-209ENST00000556909 OR2W1Q9Y3N9 320 aa13.72□□□□□ -0.21
VIPAS39-209ENST00000556909 IGKV1D-13A0A0B4J2D9 117 aa13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 A0A1B0GW64 132 aa13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 E7EUB6 86 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms