RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 ZNF833PQ6ZTB9 187 aa4.26□□□□□ -1.73
ATXN3-244ENST00000556898 SLC25A42Q86VD7 318 aa4.26□□□□□ -1.73
ATXN3-244ENST00000556898 FAM219AQ8IW50 185 aa4.26□□□□□ -1.73
ATXN3-244ENST00000556898 SLC38A6Q8IZM9 456 aa4.26□□□□□ -1.73
ATXN3-244ENST00000556898 OR11H6Q8NGC7 330 aa4.26□□□□□ -1.73
ATXN3-244ENST00000556898 OR10X1Q8NGY0 326 aa4.26□□□□□ -1.73
ATXN3-244ENST00000556898 TCTEX1D2Q8WW35 142 aa4.26□□□□□ -1.73
ATXN3-244ENST00000556898 RTN4IP1Q8WWV3 396 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-244ENST00000556898 DEDD2Q8WXF8 326 aa4.26□□□□□ -1.73
ATXN3-244ENST00000556898 ST6GALNAC6Q969X2 333 aa4.26□□□□□ -1.73
ATXN3-244ENST00000556898 TP53RKQ96S44 253 aa4.26□□□□□ -1.73
ATXN3-244ENST00000556898 NABP2Q9BQ15 211 aa4.26□□□□□ -1.73
ATXN3-244ENST00000556898 SLC25A21Q9BQT8 299 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-244ENST00000556898 HEXA-AS1Q9H8Q6 139 aa4.26□□□□□ -1.73
ATXN3-244ENST00000556898 RAB9BQ9NP90 201 aa4.26□□□□□ -1.73
ATXN3-244ENST00000556898 COPZ2Q9P299 210 aa4.26□□□□□ -1.73
ATXN3-244ENST00000556898 C14orf166Q9Y224 244 aaKnown RBP4.26□□□□□ -1.73
ATXN3-244ENST00000556898 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.26□□□□□ -1.734e-12■■■□□ 18.3
ATXN3-244ENST00000556898 KIAA2026Q5HYC2 2103 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 DSCAML1Q8TD84 2053 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 IGHV1-69DA0A0B4J2H0 117 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 A0A0G2JRQ6 117 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 TEX13DA0A0J9YY54 714 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-244ENST00000556898 C3orf85A0A1B0GTC6 90 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 hCG_1809904A0A1W2PP81 198 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 A0A1W2PPE2 198 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 A0A1W2PPI3 338 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 A0A1W2PR64 198 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 A0A1W2PRV1 198 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 A0A1W2PRX2 142 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 C9orf170A2RU37 121 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 TMEM89A2RUT3 159 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 CCSO14618 274 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 RAB29O14966 203 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 FCGR3BO75015 233 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 ADAP1O75689 374 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 SIX6O95475 246 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 DHFRP00374 187 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 IGHV1-69P01742 117 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 HLA-AP01891 365 aaKnown RBP4.25□□□□□ -1.73
ATXN3-244ENST00000556898 IL5P05113 134 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 GYPEP15421 78 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 CNTFRP26992 372 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 HTR1DP28221 377 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 SAA4P35542 130 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 LPAR6P43657 344 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 RAB7AP51149 207 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 UBE2E1P51965 193 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 PRRX1P54821 245 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 RND3P61587 244 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 ZNF816Q0VGE8 651 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-244ENST00000556898 FOXL1Q12952 345 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 DHRS2Q13268 280 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 FOXE3Q13461 319 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 TMEM187Q14656 261 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 FCN2Q15485 313 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 SSX2Q16385 188 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 TATDN3Q17R31 274 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 IZUMO4Q1ZYL8 232 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 TMEM30BQ3MIR4 351 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 C4orf46Q504U0 113 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 ZNF585BQ52M93 769 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 KCTD9Q7L273 389 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 LYG2Q86SG7 212 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 MOB3BQ86TA1 216 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 TGIF2LXQ8IUE1 241 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 SELENOHQ8IZQ5 122 aaKnown RBP4.25□□□□□ -1.73
ATXN3-244ENST00000556898 SPAG16Q8N0X2 631 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 C8orf31Q8N9H6 132 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 UXS1Q8NBZ7 420 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 BEND2Q8NDZ0 799 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 ZFAND1Q8TCF1 268 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 DDB2Q92466 427 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 AKR1E2Q96JD6 320 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 GHITMQ9H3K2 345 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 UNKLQ9H9P5 680 aaKnown RBP4.25□□□□□ -1.73
ATXN3-244ENST00000556898 PIPOXQ9P0Z9 390 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 GAB2Q9UQC2 676 aa4.25□□□□□ -1.73
ATXN3-244ENST00000556898 IGHV1-3A0A0C4DH29 117 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 C7orf66A4D0T2 115 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 SH2D7A6NKC9 451 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-244ENST00000556898 MPTX1A8MV57 137 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 LEUTXA8MZ59 168 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 H0YJW9 148 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 TIMM23O14925 209 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 S1PR2O95136 353 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 NXPH3O95157 252 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 VENTXO95231 258 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 GAPDHP04406 335 aaKnown RBP4.24□□□□□ -1.73
ATXN3-244ENST00000556898 IGKV1-16P04430 117 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 HOXB5P09067 269 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 MYOD1P15172 320 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 F2RP25116 425 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 IL3RAP26951 378 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 THBS3P49746 956 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 ZNF137PP52743 207 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 TAS2R31P59538 309 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 DEFA6Q01524 100 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 CD300CQ08708 224 aa4.24□□□□□ -1.73
ATXN3-244ENST00000556898 FHL2Q14192 279 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms