RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 MUC21A0A140T8X8 626 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 LRRC30A6NM36 301 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 KLF7O75840 302 aaPredicted RBP5.16□□□□□ -1.58
TDP1-215ENST00000556498 DPM2O94777 84 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 IGLC6P0CF74 106 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 RPS14P62263 151 aaKnown RBP5.16□□□□□ -1.58
TDP1-215ENST00000556498 RPS24P62847 133 aaKnown RBP5.16□□□□□ -1.58
TDP1-215ENST00000556498 POLR2LP62875 67 aaKnown RBP5.16□□□□□ -1.58
TDP1-215ENST00000556498 LAMTOR4Q0VGL1 99 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 C1orf61Q13536 156 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 MUC21Q5SSG8 566 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 C1orf220Q5T0J3 134 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 DNM1P46Q6ZS02 220 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 FAM19A1Q7Z5A9 133 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 ANKRD37Q7Z713 158 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 MOB3BQ86TA1 216 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 SLC25A42Q86VD7 318 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 KRTAP19-1Q8IUB9 90 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 SLC22A18ASQ8N1D0 253 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 C1orf158Q8N1D5 194 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 LINC00471Q8N535 108 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 SUMF1Q8NBK3 374 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 OR51H1Q8NH63 302 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 MRPL30Q8TCC3 161 aaKnown RBP5.16□□□□□ -1.58
TDP1-215ENST00000556498 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.16□□□□□ -1.58
TDP1-215ENST00000556498 CRYGNQ8WXF5 182 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 ADAT3Q96EY9 351 aaPredicted RBP5.16□□□□□ -1.58
TDP1-215ENST00000556498 SEC22AQ96IW7 307 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 CHST6Q9GZX3 395 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 PBOV1Q9GZY1 135 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 POLR1DQ9Y2S0 133 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 KCPQ6ZWJ8 1503 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 CACNA1FO60840 1977 aa5.16□□□□□ -1.58
TDP1-215ENST00000556498 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.15□□□□□ -1.58
TDP1-215ENST00000556498 TRAV1-2A0A0B4J238 106 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 SMIM28A0A1B0GU29 152 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 LOC102725191A0A1B0GVB3 256 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 PRSS29PA6NIE9 313 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 RIIAD1A6NNX1 92 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 ZAR1LA6NP61 321 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 H3BMG7 143 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 K7ENP7 123 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 PITX3O75364 302 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 ARL6IP5O75915 188 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 SNCGO76070 127 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 STK17BO94768 372 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 CXorf1O96002 111 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 IGKV5-2P06315 115 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 RBM11P57052 281 aaKnown RBP5.15□□□□□ -1.59
TDP1-215ENST00000556498 GGTLC2Q14390 218 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 RNPS1Q15287 305 aaKnown RBP5.15□□□□□ -1.59
TDP1-215ENST00000556498 CRB2Q5IJ48 1285 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 PSMG4Q5JS54 123 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 Q6ZSR3 168 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 TDHQ8IZJ6 230 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 METTL27Q8N6F8 245 aaPredicted RBP5.15□□□□□ -1.59
TDP1-215ENST00000556498 MDS2Q8NDY4 140 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 OR4X2Q8NGF9 303 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 WDYHV1Q96HA8 205 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 LINC00477Q96M19 166 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 WWC2-AS2Q96NR7 200 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 LINC01587Q99440 93 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 RARRES2Q99969 163 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 CST11Q9H112 138 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 VSIRQ9H7M9 311 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 RETNQ9HD89 108 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 RARRES3Q9UL19 164 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 RCL1Q9Y2P8 373 aaKnown RBP5.15□□□□□ -1.59
TDP1-215ENST00000556498 MRPS17Q9Y2R5 130 aaKnown RBP5.15□□□□□ -1.59
TDP1-215ENST00000556498 NSG2Q9Y328 171 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 TRAPPC1Q9Y5R8 145 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 PXMP4Q9Y6I8 212 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 R4GN57 208 aa5.15□□□□□ -1.59
TDP1-215ENST00000556498 DDX60Q8IY21 1712 aaKnown RBP5.14□□□□□ -1.59
TDP1-215ENST00000556498 RGPD2P0DJD1 1756 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 LAMA4Q16363 1823 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 FRMPD3Q5JV73 1810 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 TMEM272A0A1B0GTI8 110 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 FAM90A26D6RGX4 464 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 H3BTX0 84 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 SH2D1BO14796 132 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 NAPSAO96009 420 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 MT-ATP8P03928 68 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 LGALS1P09382 135 aaKnown RBP5.14□□□□□ -1.59
TDP1-215ENST00000556498 GATA1P15976 413 aaPredicted RBP5.14□□□□□ -1.59
TDP1-215ENST00000556498 GABRG2P18507 467 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 WT1P19544 449 aaPredicted RBP5.14□□□□□ -1.59
TDP1-215ENST00000556498 CD38P28907 300 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 GPR183P32249 361 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 ACVRL1P37023 503 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 VDAC2P45880 294 aaPredicted RBP5.14□□□□□ -1.59
TDP1-215ENST00000556498 GALR1P47211 349 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 SSR4P51571 173 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 DLX1P56177 255 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 KRTDAPP60985 99 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 IHHQ14623 411 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 ICAM4Q14773 271 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 IL17AQ16552 155 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 C2orf68Q2NKX9 166 aa5.14□□□□□ -1.59
TDP1-215ENST00000556498 KIAA1644Q3SXP7 199 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms