RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 PSG5Q15238 335 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 UNQ5815/PRO19632Q6UWF5 114 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 AHSA2Q719I0 299 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 PDPNQ86YL7 162 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 C8orf59Q8N0T1 100 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-220ENST00000556486 RPP25LQ8N5L8 163 aaKnown RBP7.62□□□□□ -1.19
SCFD1-220ENST00000556486 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-220ENST00000556486 LFNGQ8NES3 379 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 ABHD14BQ96IU4 210 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 TMEM68Q96MH6 324 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 OR4C12Q96R67 309 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 TSNAXQ99598 290 aaKnown RBP7.62□□□□□ -1.19
SCFD1-220ENST00000556486 NICN1Q9BSH3 213 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 LPAR5Q9H1C0 372 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 SCPEP1Q9HB40 452 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 RANGRFQ9HD47 186 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-220ENST00000556486 AKIP1Q9NQ31 210 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 C12orf4Q9NQ89 552 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 PLEKHJ1Q9NW61 149 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 SIGLEC8Q9NYZ4 499 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 HSPB7Q9UBY9 170 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 A0A0A6YYD4 124 aa7.61□□□□□ -1.19
SCFD1-220ENST00000556486 A0A0G2JLM5 398 aa7.61□□□□□ -1.19
SCFD1-220ENST00000556486 H7C2Y5 167 aa7.61□□□□□ -1.19
SCFD1-220ENST00000556486 DIRAS3O95661 229 aa7.61□□□□□ -1.19
SCFD1-220ENST00000556486 CA2P00918 260 aa7.61□□□□□ -1.19
SCFD1-220ENST00000556486 IGHV3-11P01762 117 aa7.61□□□□□ -1.19
SCFD1-220ENST00000556486 SRMP19623 302 aa7.61□□□□□ -1.19
SCFD1-220ENST00000556486 TPPP2P59282 170 aa7.61□□□□□ -1.19
SCFD1-220ENST00000556486 KLF5Q13887 457 aaPredicted RBP7.61□□□□□ -1.19
SCFD1-220ENST00000556486 GLDNQ6ZMI3 551 aaPredicted RBP7.61□□□□□ -1.19
SCFD1-220ENST00000556486 ZNF383Q8NA42 475 aa7.61□□□□□ -1.19
SCFD1-220ENST00000556486 POC5Q8NA72 575 aa7.61□□□□□ -1.19
SCFD1-220ENST00000556486 THAP7Q9BT49 309 aaPredicted RBP7.61□□□□□ -1.19
SCFD1-220ENST00000556486 FAM103A1Q9BTL3 118 aaKnown RBP7.61□□□□□ -1.19
SCFD1-220ENST00000556486 URM1Q9BTM9 101 aaKnown RBP7.61□□□□□ -1.19
SCFD1-220ENST00000556486 MND1Q9BWT6 205 aa7.61□□□□□ -1.19
SCFD1-220ENST00000556486 Q9N2K0 584 aa7.61□□□□□ -1.19
SCFD1-220ENST00000556486 METTL1Q9UBP6 276 aaKnown RBP7.61□□□□□ -1.19
SCFD1-220ENST00000556486 LSM2Q9Y333 95 aaKnown RBP7.61□□□□□ -1.19
SCFD1-220ENST00000556486 A3GALT2U3KPV4 340 aa7.61□□□□□ -1.19
SCFD1-220ENST00000556486 IGKV1-6A0A0C4DH72 117 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 SLC17A2O00624 439 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 CASQ2O14958 399 aaPredicted RBP7.6□□□□□ -1.19
SCFD1-220ENST00000556486 TRGV3P03979 118 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 CDK1P06493 297 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 CRYGBP07316 175 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 CEACAM6P40199 344 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 LGALS7P47929 136 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 SERPINB10P48595 397 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 PPP5CP53041 499 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 TMEM50BP56557 158 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 SPHARQ15513 63 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 HSD17B12Q53GQ0 312 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 RBM48Q5RL73 367 aaKnown RBP7.6□□□□□ -1.19
SCFD1-220ENST00000556486 IL34Q6ZMJ4 242 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 Q6ZSN1 163 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 C2CD4CQ8TF44 421 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 TUBA4BQ9H853 241 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 CHMP1AQ9HD42 196 aaPredicted RBP7.6□□□□□ -1.19
SCFD1-220ENST00000556486 OR1A1Q9P1Q5 309 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 AK3Q9UIJ7 227 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 HECTD4Q9Y4D8 3996 aa7.6□□□□□ -1.19
SCFD1-220ENST00000556486 H0Y980 276 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 EBAG9O00559 213 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 SOCS1O15524 211 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 IGLV2-23P01705 113 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 APOA2P02652 100 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 SCTP09683 121 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 AADACP22760 399 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 FXYD3Q14802 87 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 OGFRL1Q5TC84 451 aaPredicted RBP7.59□□□□□ -1.19
SCFD1-220ENST00000556486 ZNF343Q6P1L6 599 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 Q6ZWC4 215 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 CEACAM19Q7Z692 300 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 ANKRD13BQ86YJ7 626 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 DRAXINQ8NBI3 349 aaPredicted RBP7.59□□□□□ -1.19
SCFD1-220ENST00000556486 BPIFB6Q8NFQ5 453 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 OR9G4Q8NGQ1 327 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 MS4A10Q96PG2 267 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 HDHD3Q9BSH5 251 aaPredicted RBP7.59□□□□□ -1.19
SCFD1-220ENST00000556486 KCNK15Q9H427 330 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 ZNF221Q9UK13 617 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 KMT2AQ03164 3969 aa7.59□□□□□ -1.19
SCFD1-220ENST00000556486 TRDCB7Z8K6 153 aa7.58□□□□□ -1.2
SCFD1-220ENST00000556486 NPIPB6E9PJ23 425 aa7.58□□□□□ -1.2
SCFD1-220ENST00000556486 PAGE4O60829 102 aa7.58□□□□□ -1.2
SCFD1-220ENST00000556486 DEDDO75618 318 aa7.58□□□□□ -1.2
SCFD1-220ENST00000556486 NXPH3O95157 252 aa7.58□□□□□ -1.2
SCFD1-220ENST00000556486 RANBP1P43487 201 aa7.58□□□□□ -1.2
SCFD1-220ENST00000556486 TPBGQ13641 420 aa7.58□□□□□ -1.2
SCFD1-220ENST00000556486 ZNF124Q15973 351 aa7.58□□□□□ -1.2
SCFD1-220ENST00000556486 OR4A4PQ8NGN8 299 aa7.58□□□□□ -1.2
SCFD1-220ENST00000556486 GRPEL2Q8TAA5 225 aa7.58□□□□□ -1.2
SCFD1-220ENST00000556486 USMG5Q96IX5 58 aa7.58□□□□□ -1.2
SCFD1-220ENST00000556486 GFI1Q99684 422 aa7.58□□□□□ -1.2
SCFD1-220ENST00000556486 CABLES2Q9BTV7 478 aa7.58□□□□□ -1.2
SCFD1-220ENST00000556486 HIPK2Q9H2X6 1198 aa7.58□□□□□ -1.2
SCFD1-220ENST00000556486 PLEKHA3Q9HB20 300 aa7.58□□□□□ -1.2
SCFD1-220ENST00000556486 RDH8Q9NYR8 311 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms