RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 GPR107Q5VW38 600 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 KCTD9Q7L273 389 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 OVCH2Q7RTZ1 564 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 ANKRD13BQ86YJ7 626 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 TCTEX1D1Q8N7M0 179 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 TEX45Q8NA69 505 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 POC5Q8NA72 575 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 OR5AP2Q8NGF4 316 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 OR5M8Q8NGP6 311 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 OSR1Q8TAX0 266 aaPredicted RBP6.26□□□□□ -1.41
VTI1B-206ENST00000556461 TCTEX1D2Q8WW35 142 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 DCUN1D4Q92564 292 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 DLX4Q92988 240 aaPredicted RBP6.26□□□□□ -1.41
VTI1B-206ENST00000556461 DCUN1D5Q9BTE7 237 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 SLC5A7Q9GZV3 580 aa6.26□□□□□ -1.41
VTI1B-206ENST00000556461 ZNF430Q9H8G1 570 aaPredicted RBP6.26□□□□□ -1.41
VTI1B-206ENST00000556461 A0A1B0GW64 132 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 E7EUB6 86 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 LINC01619G3V211 115 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 RAMP3O60896 148 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 SLC22A5O76082 557 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 PRH1P02810 166 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 OR8U8P0C7N1 319 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 NAT1P18440 290 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 CBX5P45973 191 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 CDK10Q15131 360 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 TNXAQ16473 311 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 ZNF818PQ6ZRF7 136 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 C19orf35Q6ZS72 473 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 TMEM17Q86X19 198 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 SNX29P2Q8IUI4 249 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 LYSMD2Q8IV50 215 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 GPX8Q8TED1 209 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 GIMAP1Q8WWP7 306 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 SRSF12Q8WXF0 261 aaKnown RBP6.25□□□□□ -1.41
VTI1B-206ENST00000556461 DPF1Q92782 380 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 KCTD12Q96CX2 325 aaKnown RBP6.25□□□□□ -1.41
VTI1B-206ENST00000556461 PRR25Q96S07 402 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 HSD17B10Q99714 261 aaKnown RBP6.25□□□□□ -1.41
VTI1B-206ENST00000556461 MCRIP2Q9BUT9 160 aaKnown RBP6.25□□□□□ -1.41
VTI1B-206ENST00000556461 MRPS26Q9BYN8 205 aaKnown RBP6.25□□□□□ -1.41
VTI1B-206ENST00000556461 IFT46Q9NQC8 304 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 ZNF355PQ9NSJ1 428 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 EHFQ9NZC4 300 aa6.25□□□□□ -1.41
VTI1B-206ENST00000556461 MRPS7Q9Y2R9 242 aaKnown RBP6.25□□□□□ -1.41
VTI1B-206ENST00000556461 HMX3A6NHT5 357 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 SULT1C2O00338 296 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 TRBV12-3P01733 135 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 APOA1P02647 267 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 IL6RP08887 468 aaPredicted RBP6.24□□□□□ -1.41
VTI1B-206ENST00000556461 HLA-DMAP28067 261 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 GNRHRP30968 328 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 PRSS3P35030 304 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 RORCP51449 518 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 ZNF45Q02386 682 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 DYRK1AQ13627 763 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 SPCS2Q15005 226 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 RNASE12Q5GAN4 147 aaKnown RBP6.24□□□□□ -1.41
VTI1B-206ENST00000556461 C9orf66Q5T8R8 295 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 PYHIN1Q6K0P9 492 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 DHRS11Q6UWP2 260 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 ZNF66Q6ZN08 573 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 SSX9Q7RTT3 188 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 PUSL1Q8N0Z8 303 aaKnown RBP6.24□□□□□ -1.41
VTI1B-206ENST00000556461 ADAD2Q8NCV1 583 aaKnown RBP6.24□□□□□ -1.41
VTI1B-206ENST00000556461 OR4S2Q8NH73 311 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 ACOT12Q8WYK0 555 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 PHB2Q99623 299 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 ZNF2Q9BSG1 426 aaPredicted RBP6.24□□□□□ -1.41
VTI1B-206ENST00000556461 GPR61Q9BZJ8 451 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 TINAGL1Q9GZM7 467 aaPredicted RBP6.24□□□□□ -1.41
VTI1B-206ENST00000556461 FXYD6Q9H0Q3 95 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 ADAM30Q9UKF2 790 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 PRELID3BQ9Y3B1 194 aa6.24□□□□□ -1.41
VTI1B-206ENST00000556461 TRAV3A0A0B4J244 114 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 ANKRD34BA5PLL1 514 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 CGB1A6NKQ9 187 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 TEX22C9J3V5 150 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 OVOL1O14753 267 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 KBTBD11O94819 623 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 OR2A4O95047 310 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 HSPB1P04792 205 aaKnown RBP6.23□□□□□ -1.41
VTI1B-206ENST00000556461 OR9G9P0C7N8 305 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 RPA2P15927 270 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 HRH1P35367 487 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 ECI1P42126 302 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 HERV-K104P61576 105 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 DGCR2P98153 550 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 MSMO1Q15800 293 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 DEFB121Q5J5C9 76 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 GPR141Q7Z602 305 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 HAPLN4Q86UW8 402 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 MMD2Q8IY49 270 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 SPAG16Q8N0X2 631 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 OR5H2Q8NGV7 314 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 OR51H1Q8NH63 302 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 TMEM167AQ8TBQ9 72 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 MOB3AQ96BX8 217 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 CMTM3Q96MX0 182 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 OR2A7Q96R45 310 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms