RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ARL6IP1Q15041 203 aa14.29□□□□□ -0.12
CDKN3-209ENST00000556102 CDK10Q15131 360 aa14.29□□□□□ -0.12
CDKN3-209ENST00000556102 SPIN2AQ99865 258 aa14.29□□□□□ -0.12
CDKN3-209ENST00000556102 SPIN2BQ9BPZ2 258 aa14.29□□□□□ -0.12
CDKN3-209ENST00000556102 ZNF430Q9H8G1 570 aaPredicted RBP14.29□□□□□ -0.12
CDKN3-209ENST00000556102 AKIP1Q9NQ31 210 aa14.29□□□□□ -0.12
CDKN3-209ENST00000556102 NDUFB11Q9NX14 153 aa14.29□□□□□ -0.12
CDKN3-209ENST00000556102 TRBV9A0A0B4J1U6 114 aa14.28□□□□□ -0.12
CDKN3-209ENST00000556102 BMPR1BO00238 502 aa14.28□□□□□ -0.12
CDKN3-209ENST00000556102 ACTL6BO94805 426 aa14.28□□□□□ -0.12
CDKN3-209ENST00000556102 IFNA6P05013 189 aa14.28□□□□□ -0.12
CDKN3-209ENST00000556102 SAA1P0DJI8 122 aaPredicted RBP14.28□□□□□ -0.12
CDKN3-209ENST00000556102 ZNF45Q02386 682 aa14.28□□□□□ -0.12
CDKN3-209ENST00000556102 ATP5G2Q06055 141 aa14.28□□□□□ -0.12
CDKN3-209ENST00000556102 MMD2Q8IY49 270 aa14.28□□□□□ -0.12
CDKN3-209ENST00000556102 ZNF645Q8N7E2 425 aa14.28□□□□□ -0.12
CDKN3-209ENST00000556102 TRDV1A0A1B0GX56 115 aa14.27□□□□□ -0.13
CDKN3-209ENST00000556102 TUSC2O75896 110 aa14.27□□□□□ -0.13
CDKN3-209ENST00000556102 PRH1P02810 166 aa14.27□□□□□ -0.13
CDKN3-209ENST00000556102 KCTD9Q7L273 389 aa14.27□□□□□ -0.13
CDKN3-209ENST00000556102 TTC9CQ8N5M4 171 aa14.27□□□□□ -0.13
CDKN3-209ENST00000556102 ATG5Q9H1Y0 275 aa14.27□□□□□ -0.13
CDKN3-209ENST00000556102 ELF5Q9UKW6 265 aaPredicted RBP14.27□□□□□ -0.13
CDKN3-209ENST00000556102 BLOC1S6Q9UL45 172 aa14.27□□□□□ -0.13
CDKN3-209ENST00000556102 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.26□□□□□ -0.13
CDKN3-209ENST00000556102 FCGR3BO75015 233 aa14.26□□□□□ -0.13
CDKN3-209ENST00000556102 CTXN2P0C2S0 81 aa14.26□□□□□ -0.13
CDKN3-209ENST00000556102 GALP22466 123 aa14.26□□□□□ -0.13
CDKN3-209ENST00000556102 C10orf55Q5SWW7 151 aa14.26□□□□□ -0.13
CDKN3-209ENST00000556102 LAX1Q8IWV1 398 aa14.26□□□□□ -0.13
CDKN3-209ENST00000556102 DCUN1D5Q9BTE7 237 aa14.26□□□□□ -0.13
CDKN3-209ENST00000556102 MRPS7Q9Y2R9 242 aaKnown RBP14.26□□□□□ -0.13
CDKN3-209ENST00000556102 PRELID3BQ9Y3B1 194 aa14.26□□□□□ -0.13
CDKN3-209ENST00000556102 OR2W1Q9Y3N9 320 aa14.26□□□□□ -0.13
CDKN3-209ENST00000556102 J3QRK9 145 aa14.25□□□□□ -0.13
CDKN3-209ENST00000556102 SLC22A5O76082 557 aa14.25□□□□□ -0.13
CDKN3-209ENST00000556102 HLA-DQB1P01920 261 aa14.25□□□□□ -0.13
CDKN3-209ENST00000556102 CD36P16671 472 aa14.25□□□□□ -0.13
CDKN3-209ENST00000556102 CDNFQ49AH0 187 aa14.25□□□□□ -0.13
CDKN3-209ENST00000556102 FAM209BQ5JX69 171 aa14.25□□□□□ -0.13
CDKN3-209ENST00000556102 ADAMTSL5Q6ZMM2 481 aa14.25□□□□□ -0.13
CDKN3-209ENST00000556102 SLC25A42Q86VD7 318 aa14.25□□□□□ -0.13
CDKN3-209ENST00000556102 NR2C2APQ86WQ0 139 aa14.25□□□□□ -0.13
CDKN3-209ENST00000556102 NECAP1Q8NC96 275 aa14.25□□□□□ -0.13
CDKN3-209ENST00000556102 VCX3BQ9H321 246 aa14.25□□□□□ -0.13
CDKN3-209ENST00000556102 RBMX2Q9Y388 322 aaKnown RBP14.25□□□□□ -0.13
CDKN3-209ENST00000556102 CEPT1Q9Y6K0 416 aa14.25□□□□□ -0.13
CDKN3-209ENST00000556102 NFYAP23511 347 aaPredicted RBP14.24□□□□□ -0.13
CDKN3-209ENST00000556102 HSPA13P48723 471 aa14.24□□□□□ -0.13
CDKN3-209ENST00000556102 CD81P60033 236 aa14.24□□□□□ -0.13
CDKN3-209ENST00000556102 RPL30P62888 115 aaKnown RBP14.24□□□□□ -0.13
CDKN3-209ENST00000556102 CD300EQ496F6 205 aaPredicted RBP14.24□□□□□ -0.13
CDKN3-209ENST00000556102 OR2B11Q5JQS5 317 aa14.24□□□□□ -0.13
CDKN3-209ENST00000556102 HACD4Q5VWC8 232 aa14.24□□□□□ -0.13
CDKN3-209ENST00000556102 C22orf42Q6IC83 251 aa14.24□□□□□ -0.13
CDKN3-209ENST00000556102 LINC00322Q6ZN03 302 aaPredicted RBP14.24□□□□□ -0.13
CDKN3-209ENST00000556102 DYNLRB2Q8TF09 96 aa14.24□□□□□ -0.13
CDKN3-209ENST00000556102 KCTD12Q96CX2 325 aaKnown RBP14.24□□□□□ -0.13
CDKN3-209ENST00000556102 CNBD2Q96M20 576 aa14.24□□□□□ -0.13
CDKN3-209ENST00000556102 ST6GALNAC5Q9BVH7 336 aa14.24□□□□□ -0.13
CDKN3-209ENST00000556102 OR51E2Q9H255 320 aa14.24□□□□□ -0.13
CDKN3-209ENST00000556102 DCSTAMPQ9H295 470 aa14.24□□□□□ -0.13
CDKN3-209ENST00000556102 PLEKHA3Q9HB20 300 aa14.24□□□□□ -0.13
CDKN3-209ENST00000556102 ZNF257Q9Y2Q1 563 aa14.24□□□□□ -0.13
CDKN3-209ENST00000556102 EPPK1P58107 5090 aaKnown RBP14.23□□□□□ -0.13
CDKN3-209ENST00000556102 OR2J3O76001 311 aa14.23□□□□□ -0.13
CDKN3-209ENST00000556102 TPPPO94811 219 aa14.23□□□□□ -0.13
CDKN3-209ENST00000556102 C15orf32Q32M92 178 aa14.23□□□□□ -0.13
CDKN3-209ENST00000556102 IZUMO2Q6UXV1 221 aa14.23□□□□□ -0.13
CDKN3-209ENST00000556102 NEURL2Q9BR09 285 aa14.23□□□□□ -0.13
CDKN3-209ENST00000556102 SLC2A8Q9NY64 477 aa14.23□□□□□ -0.13
CDKN3-209ENST00000556102 IGKV1D-13A0A0B4J2D9 117 aa14.22□□□□□ -0.13
CDKN3-209ENST00000556102 SMIM30A4D0T7 59 aa14.22□□□□□ -0.13
CDKN3-209ENST00000556102 HMX3A6NHT5 357 aa14.22□□□□□ -0.13
CDKN3-209ENST00000556102 ZNF785A8K8V0 405 aa14.22□□□□□ -0.13
CDKN3-209ENST00000556102 TEX22C9J3V5 150 aa14.22□□□□□ -0.13
CDKN3-209ENST00000556102 IGLV2-14P01704 120 aa14.22□□□□□ -0.13
CDKN3-209ENST00000556102 IGKV1-13P0DP09 117 aa14.22□□□□□ -0.13
CDKN3-209ENST00000556102 CNIH2Q6PI25 160 aa14.22□□□□□ -0.13
CDKN3-209ENST00000556102 OR4S2Q8NH73 311 aa14.22□□□□□ -0.13
CDKN3-209ENST00000556102 VSTM2AQ8TAG5 236 aa14.22□□□□□ -0.13
CDKN3-209ENST00000556102 NUDCD2Q8WVJ2 157 aa14.22□□□□□ -0.13
CDKN3-209ENST00000556102 HSD17B10Q99714 261 aaKnown RBP14.22□□□□□ -0.13
CDKN3-209ENST00000556102 HIPK2Q9H2X6 1198 aa14.22□□□□□ -0.13
CDKN3-209ENST00000556102 RETNQ9HD89 108 aa14.22□□□□□ -0.13
CDKN3-209ENST00000556102 DMRT1Q9Y5R6 373 aa14.22□□□□□ -0.13
CDKN3-209ENST00000556102 BIRC6Q9NR09 4857 aa14.21□□□□□ -0.13
CDKN3-209ENST00000556102 NPIPB5A8MRT5 1133 aa14.21□□□□□ -0.13
CDKN3-209ENST00000556102 NOTOA8MTQ0 251 aa14.21□□□□□ -0.13
CDKN3-209ENST00000556102 PPP5D1E7EU14 171 aa14.21□□□□□ -0.13
CDKN3-209ENST00000556102 GGCTO75223 188 aaKnown RBP14.21□□□□□ -0.13
CDKN3-209ENST00000556102 SCGNO76038 276 aa14.21□□□□□ -0.13
CDKN3-209ENST00000556102 KBTBD11O94819 623 aa14.21□□□□□ -0.13
CDKN3-209ENST00000556102 RPL27AP46776 148 aaKnown RBP14.21□□□□□ -0.13
CDKN3-209ENST00000556102 DEFB114Q30KQ6 69 aa14.21□□□□□ -0.13
CDKN3-209ENST00000556102 VKORC1L1Q8N0U8 176 aa14.21□□□□□ -0.13
CDKN3-209ENST00000556102 TMEM167AQ8TBQ9 72 aa14.21□□□□□ -0.13
CDKN3-209ENST00000556102 TCTEX1D2Q8WW35 142 aa14.21□□□□□ -0.13
CDKN3-209ENST00000556102 OR2A7Q96R45 310 aa14.21□□□□□ -0.13
CDKN3-209ENST00000556102 DPPA5A6NC42 116 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms