RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 CALRP27797 417 aaKnown RBP10.76□□□□□ -0.69
CHMP4BP1-201ENST00000556017 OR10A3P58181 314 aa10.76□□□□□ -0.69
CHMP4BP1-201ENST00000556017 EIF4EBP1Q13541 118 aaPredicted RBP10.76□□□□□ -0.69
CHMP4BP1-201ENST00000556017 KLK9Q2XQG4 91 aa10.76□□□□□ -0.69
CHMP4BP1-201ENST00000556017 HES5Q5TA89 166 aa10.76□□□□□ -0.69
CHMP4BP1-201ENST00000556017 Q6ZS49 121 aa10.76□□□□□ -0.69
CHMP4BP1-201ENST00000556017 NECAP1Q8NC96 275 aa10.76□□□□□ -0.69
CHMP4BP1-201ENST00000556017 CACNG8Q8WXS5 425 aa10.76□□□□□ -0.69
CHMP4BP1-201ENST00000556017 UFD1Q92890 307 aa10.76□□□□□ -0.69
CHMP4BP1-201ENST00000556017 RAB3CQ96E17 227 aa10.76□□□□□ -0.69
CHMP4BP1-201ENST00000556017 CCDC140Q96MF4 163 aa10.76□□□□□ -0.69
CHMP4BP1-201ENST00000556017 FANCD2OSQ96PS1 177 aa10.76□□□□□ -0.69
CHMP4BP1-201ENST00000556017 PHB2Q99623 299 aa10.76□□□□□ -0.69
CHMP4BP1-201ENST00000556017 SRD5A3Q9H8P0 318 aa10.76□□□□□ -0.69
CHMP4BP1-201ENST00000556017 KLK9Q9UKQ9 250 aa10.76□□□□□ -0.69
CHMP4BP1-201ENST00000556017 RAB22AQ9UL26 194 aa10.76□□□□□ -0.69
CHMP4BP1-201ENST00000556017 A0A0B4J203 849 aa10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 TMEM213A2RRL7 107 aa10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 HMX3A6NHT5 357 aa10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 OR2J3O76001 311 aa10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 OR2C1O95371 312 aa10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 IL6RP08887 468 aaPredicted RBP10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 HIST1H1DP16402 221 aaKnown RBP10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 EWSR1Q01844 656 aaKnown RBP eCLIP10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 ATP5G2Q06055 141 aa10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 CDK10Q15131 360 aa10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 C15orf32Q32M92 178 aa10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 VMA21Q3ZAQ7 101 aa10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 NR2C2APQ86WQ0 139 aa10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 OR10R2Q8NGX6 335 aa10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 OSR1Q8TAX0 266 aaPredicted RBP10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 ACOT12Q8WYK0 555 aa10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 OVOL2Q9BRP0 275 aa10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 SLC2A8Q9NY64 477 aa10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 V9GY05 133 aa10.75□□□□□ -0.69
CHMP4BP1-201ENST00000556017 CGB1A6NKQ9 187 aa10.74□□□□□ -0.69
CHMP4BP1-201ENST00000556017 LGALS9O00182 355 aa10.74□□□□□ -0.69
CHMP4BP1-201ENST00000556017 ARL6IP5O75915 188 aa10.74□□□□□ -0.69
CHMP4BP1-201ENST00000556017 MLLT11Q13015 90 aaPredicted RBP10.74□□□□□ -0.69
CHMP4BP1-201ENST00000556017 TMEM61Q8N0U2 210 aa10.74□□□□□ -0.69
CHMP4BP1-201ENST00000556017 VKORC1L1Q8N0U8 176 aa10.74□□□□□ -0.69
CHMP4BP1-201ENST00000556017 IL17DQ8TAD2 202 aa10.74□□□□□ -0.69
CHMP4BP1-201ENST00000556017 LINC00476Q8WZB0 136 aa10.74□□□□□ -0.69
CHMP4BP1-201ENST00000556017 KCTD12Q96CX2 325 aaKnown RBP10.74□□□□□ -0.69
CHMP4BP1-201ENST00000556017 ADTRPQ96IZ2 230 aa10.74□□□□□ -0.69
CHMP4BP1-201ENST00000556017 MLXQ9UH92 298 aa10.74□□□□□ -0.69
CHMP4BP1-201ENST00000556017 IGKV1D-13A0A0B4J2D9 117 aa10.73□□□□□ -0.69
CHMP4BP1-201ENST00000556017 EBAG9O00559 213 aa10.73□□□□□ -0.69
CHMP4BP1-201ENST00000556017 NDUFB8O95169 186 aa10.73□□□□□ -0.69
CHMP4BP1-201ENST00000556017 HSMCR30P0CW71 290 aa10.73□□□□□ -0.69
CHMP4BP1-201ENST00000556017 IGKV1-13P0DP09 117 aa10.73□□□□□ -0.69
CHMP4BP1-201ENST00000556017 CBLN1P23435 193 aa10.73□□□□□ -0.69
CHMP4BP1-201ENST00000556017 TRAM1Q15629 374 aa10.73□□□□□ -0.69
CHMP4BP1-201ENST00000556017 SSX1Q16384 188 aa10.73□□□□□ -0.69
CHMP4BP1-201ENST00000556017 GPHB5Q86YW7 130 aa10.73□□□□□ -0.69
CHMP4BP1-201ENST00000556017 S4R3C0 116 aa10.73□□□□□ -0.69
CHMP4BP1-201ENST00000556017 HECTD4Q9Y4D8 3996 aa10.72□□□□□ -0.69
CHMP4BP1-201ENST00000556017 A0A075B6Q4 140 aa10.72□□□□□ -0.69
CHMP4BP1-201ENST00000556017 IFITM5A6NNB3 132 aa10.72□□□□□ -0.69
CHMP4BP1-201ENST00000556017 A8MWP6 167 aa10.72□□□□□ -0.69
CHMP4BP1-201ENST00000556017 MPPED1O15442 326 aa10.72□□□□□ -0.69
CHMP4BP1-201ENST00000556017 GGCTO75223 188 aaKnown RBP10.72□□□□□ -0.69
CHMP4BP1-201ENST00000556017 MAP2K4P45985 399 aa10.72□□□□□ -0.69
CHMP4BP1-201ENST00000556017 CBX3Q13185 183 aa10.72□□□□□ -0.69
CHMP4BP1-201ENST00000556017 GUCA2BQ16661 112 aa10.72□□□□□ -0.69
CHMP4BP1-201ENST00000556017 MMD2Q8IY49 270 aa10.72□□□□□ -0.69
CHMP4BP1-201ENST00000556017 PUSL1Q8N0Z8 303 aaKnown RBP10.72□□□□□ -0.69
CHMP4BP1-201ENST00000556017 MGLLQ99685 303 aa10.72□□□□□ -0.69
CHMP4BP1-201ENST00000556017 SPIN2AQ99865 258 aa10.72□□□□□ -0.69
CHMP4BP1-201ENST00000556017 SPIN2BQ9BPZ2 258 aa10.72□□□□□ -0.69
CHMP4BP1-201ENST00000556017 TECRQ9NZ01 308 aaKnown RBP10.72□□□□□ -0.69
CHMP4BP1-201ENST00000556017 ZNF257Q9Y2Q1 563 aa10.72□□□□□ -0.69
CHMP4BP1-201ENST00000556017 NPIPB5A8MRT5 1133 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 J3QRK9 145 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 FCGR3BO75015 233 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 TUSC2O75896 110 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 IGHV3-23P01764 117 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 HLA-DQB1P01920 261 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 CRYGCP07315 174 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 ZNF735P0CB33 412 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 MYOD1P15172 320 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 AREGP15514 252 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 RAB6AP20340 208 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 PSMA1P25786 263 aaKnown RBP10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 OR2B11Q5JQS5 317 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 ZNF645Q8N7E2 425 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 TMEM167AQ8TBQ9 72 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 DYNLRB2Q8TF09 96 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 NRG4Q8WWG1 115 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 GINS4Q9BRT9 223 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 OR51E2Q9H255 320 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 FBXL7Q9UJT9 491 aa10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 RBMX2Q9Y388 322 aaKnown RBP10.71□□□□□ -0.69
CHMP4BP1-201ENST00000556017 VPS13DQ5THJ4 4388 aa10.7□□□□□ -0.7
CHMP4BP1-201ENST00000556017 TRAV1-2A0A0B4J238 106 aa10.7□□□□□ -0.7
CHMP4BP1-201ENST00000556017 KBTBD11O94819 623 aa10.7□□□□□ -0.7
CHMP4BP1-201ENST00000556017 CTRB1P17538 263 aa10.7□□□□□ -0.7
CHMP4BP1-201ENST00000556017 NFYAP23511 347 aaPredicted RBP10.7□□□□□ -0.7
CHMP4BP1-201ENST00000556017 DTYMKP23919 212 aa10.7□□□□□ -0.7
CHMP4BP1-201ENST00000556017 CRHBPP24387 322 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms