RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 HLA-DMAP28067 261 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 RCVRNP35243 200 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 RAB25P57735 213 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 BRWD1-AS2P59051 145 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 PRSS8Q16651 343 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 AKIRIN2Q53H80 203 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 RNASE12Q5GAN4 147 aaKnown RBP10.67□□□□□ -0.7
SHMT2-219ENST00000555563 ZNF818PQ6ZRF7 136 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 LYSMD2Q8IV50 215 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 LAX1Q8IWV1 398 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 ZNF491Q8N8L2 437 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 TEX45Q8NA69 505 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 ZBTB34Q8NCN2 500 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 OR5M8Q8NGP6 311 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 MOB3AQ96BX8 217 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 UBE2E2Q96LR5 201 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 OR5B12Q96R08 314 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 BCL7BQ9BQE9 202 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 ZNF2Q9BSG1 426 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-219ENST00000555563 FXYD6Q9H0Q3 95 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 VSIG4Q9Y279 399 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 CMYA5Q8N3K9 4069 aa10.67□□□□□ -0.7
SHMT2-219ENST00000555563 SULT1C2O00338 296 aa10.66□□□□□ -0.7
SHMT2-219ENST00000555563 RAMP3O60896 148 aa10.66□□□□□ -0.7
SHMT2-219ENST00000555563 NOL3O60936 208 aaKnown RBP10.66□□□□□ -0.7
SHMT2-219ENST00000555563 KIR2DS2P43631 304 aa10.66□□□□□ -0.7
SHMT2-219ENST00000555563 FHL3Q13643 280 aa10.66□□□□□ -0.7
SHMT2-219ENST00000555563 TNXAQ16473 311 aa10.66□□□□□ -0.7
SHMT2-219ENST00000555563 ASPHD1Q5U4P2 390 aa10.66□□□□□ -0.7
SHMT2-219ENST00000555563 PYHIN1Q6K0P9 492 aa10.66□□□□□ -0.7
SHMT2-219ENST00000555563 DHRS11Q6UWP2 260 aa10.66□□□□□ -0.7
SHMT2-219ENST00000555563 VKORC1L1Q8N0U8 176 aa10.66□□□□□ -0.7
SHMT2-219ENST00000555563 DYNC2LI1Q8TCX1 351 aa10.66□□□□□ -0.7
SHMT2-219ENST00000555563 ISOC1Q96CN7 298 aa10.66□□□□□ -0.7
SHMT2-219ENST00000555563 MIXL1Q9H2W2 232 aa10.66□□□□□ -0.7
SHMT2-219ENST00000555563 ZNF430Q9H8G1 570 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-219ENST00000555563 CCDC59Q9P031 241 aaKnown RBP10.66□□□□□ -0.7
SHMT2-219ENST00000555563 NOTCH1P46531 2555 aa10.66□□□□□ -0.7
SHMT2-219ENST00000555563 H3BMQ9 156 aa10.65□□□□□ -0.7
SHMT2-219ENST00000555563 I3L521 148 aa10.65□□□□□ -0.7
SHMT2-219ENST00000555563 RGS5O15539 181 aa10.65□□□□□ -0.7
SHMT2-219ENST00000555563 CREBL2O60519 120 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-219ENST00000555563 DUS4LO95620 317 aaKnown RBP10.65□□□□□ -0.7
SHMT2-219ENST00000555563 GNRHRP30968 328 aa10.65□□□□□ -0.7
SHMT2-219ENST00000555563 TPPP2P59282 170 aa10.65□□□□□ -0.7
SHMT2-219ENST00000555563 CATR1Q13166 79 aa10.65□□□□□ -0.7
SHMT2-219ENST00000555563 FOXB2Q5VYV0 432 aa10.65□□□□□ -0.7
SHMT2-219ENST00000555563 OR51H1Q8NH63 302 aa10.65□□□□□ -0.7
SHMT2-219ENST00000555563 SRSF12Q8WXF0 261 aaKnown RBP10.65□□□□□ -0.7
SHMT2-219ENST00000555563 MS4A10Q96PG2 267 aa10.65□□□□□ -0.7
SHMT2-219ENST00000555563 ALX4Q9H161 411 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-219ENST00000555563 MSGN1A6NI15 193 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 CTDSP2O14595 271 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 KBTBD11O94819 623 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 RLN1P04808 185 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 APELAP0DMC3 54 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 RUNX1Q01196 453 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 C10orf55Q5SWW7 151 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 AADACL3Q5VUY0 350 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 MMD2Q8IY49 270 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 SPAG16Q8N0X2 631 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 PUSL1Q8N0Z8 303 aaKnown RBP10.64□□□□□ -0.71
SHMT2-219ENST00000555563 POC5Q8NA72 575 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 OR5T1Q8NG75 326 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 OR11H1Q8NG94 326 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 OR6F1Q8NGZ6 308 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 OR52I2Q8NH67 350 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 RHOVQ96L33 236 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 ABHD1Q96SE0 405 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 KLK11Q9UBX7 282 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 SCOCQ9UIL1 159 aa10.64□□□□□ -0.71
SHMT2-219ENST00000555563 NOTCH3Q9UM47 2321 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 H3BUA1 57 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 M0QYG6 137 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 RBFOX2O43251 390 aaKnown RBP eCLIP10.63□□□□□ -0.715e-15■■■■■ 33.3
SHMT2-219ENST00000555563 TPPPO94811 219 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 OR2A4O95047 310 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 IGHV3-11P01762 117 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 TRGV3P03979 118 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 LGALS1P09382 135 aaKnown RBP10.63□□□□□ -0.71
SHMT2-219ENST00000555563 CD40LGP29965 261 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 ZNF616Q08AN1 781 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 VAX1Q5SQQ9 334 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 SSX9Q7RTT3 188 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 VSTM2AQ8TAG5 236 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 BORCS5Q969J3 196 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 TMEM68Q96MH6 324 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 OR2A7Q96R45 310 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 PHB2Q99623 299 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 SLA2Q9H6Q3 261 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 ZNF355PQ9NSJ1 428 aa10.63□□□□□ -0.71
SHMT2-219ENST00000555563 MPPED1O15442 326 aa10.62□□□□□ -0.71
SHMT2-219ENST00000555563 ACTL6BO94805 426 aa10.62□□□□□ -0.71
SHMT2-219ENST00000555563 HRASP01112 189 aa10.62□□□□□ -0.71
SHMT2-219ENST00000555563 OR8U8P0C7N1 319 aa10.62□□□□□ -0.71
SHMT2-219ENST00000555563 HOXD3P31249 432 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-219ENST00000555563 TSPAN5P62079 268 aa10.62□□□□□ -0.71
SHMT2-219ENST00000555563 DGCR2P98153 550 aa10.62□□□□□ -0.71
SHMT2-219ENST00000555563 DEFA5Q01523 94 aa10.62□□□□□ -0.71
SHMT2-219ENST00000555563 OR1N2Q8NGR9 330 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms