RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 OR4D1Q15615 310 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 TMEM249Q2WGJ8 235 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 C9orf64Q5T6V5 341 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 FAM27BQ5VT28 67 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 C10orf67Q8IYJ2 551 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 Q8N2B8 174 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 RIBC1Q8N443 379 aaPredicted RBP0.28□□□□□ -2.36
SRP54-207ENST00000555535 SMCR5Q8TEV8 140 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 ACOT12Q8WYK0 555 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 PPCDCQ96CD2 204 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 OR7D2Q96RA2 312 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 TIPINQ9BVW5 301 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 NKX6-2Q9C056 277 aaPredicted RBP0.28□□□□□ -2.36
SRP54-207ENST00000555535 OR51B6Q9H340 312 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 CXorf21Q9HAI6 301 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 PARVAQ9NVD7 372 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 CD300AQ9UGN4 299 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 TMEM94Q12767 1356 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 NPATQ14207 1427 aa0.28□□□□□ -2.37
SRP54-207ENST00000555535 SETD5Q9C0A6 1442 aa0.28□□□□□ -2.37
SRP54-207ENST00000555535 DOCK3Q8IZD9 2030 aa0.28□□□□□ -2.37
SRP54-207ENST00000555535 NUP153P49790 1475 aaKnown RBP0.28□□□□□ -2.37
SRP54-207ENST00000555535 STRCQ7RTU9 1775 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 ECM29Q5VYK3 1845 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 PLXND1Q9Y4D7 1925 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 A0A087WUU8 490 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 MEIKINA0A087WXM9 373 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 UGT2B11O75310 529 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 APOA1P02647 267 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 SERPINA7P05543 415 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 S100A9P06702 114 aaKnown RBP0.27□□□□□ -2.37
SRP54-207ENST00000555535 LINC00614P0C842 121 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 SLCO1A2P46721 670 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 HAAOP46952 286 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 EIF2B2P49770 351 aaKnown RBP0.27□□□□□ -2.37
SRP54-207ENST00000555535 H2BFSP57053 126 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 RAB14P61106 215 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 TBPL1P62380 186 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 RPL30P62888 115 aaKnown RBP0.27□□□□□ -2.37
SRP54-207ENST00000555535 ANGPT1Q15389 498 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 SYCP1Q15431 976 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 C4orf26Q17RF5 130 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 Q1T7F1 81 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 HLA-DRB5Q30154 266 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 LYZL1Q6UWQ5 148 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 TMEM86AQ8N2M4 240 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 SLC22A24Q8N4F4 322 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 SGMS2Q8NHU3 365 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 SLC7A6Q92536 515 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 RBP7Q96R05 134 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 UGT2B28Q9BY64 529 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 NSRP1Q9H0G5 558 aaKnown RBP0.27□□□□□ -2.37
SRP54-207ENST00000555535 HEATR1Q9H583 2144 aaKnown RBP0.27□□□□□ -2.37
SRP54-207ENST00000555535 PCYT1BQ9Y5K3 369 aaPredicted RBP0.27□□□□□ -2.37
SRP54-207ENST00000555535 KIF24Q5T7B8 1368 aa0.27□□□□□ -2.37
SRP54-207ENST00000555535 MYH10P35580 1976 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 TRAV7A0A075B6U4 112 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 TRAV14DV4A0A0A6YYC5 116 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 A0A0J9YW62 118 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 MEIS3P1A6NDR6 274 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 OR6C6A6NF89 314 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 TRAPPC2LH3BP13 241 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 K7ERQ8 282 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 COX7A2LO14548 114 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 GEMIN2O14893 280 aaKnown RBP0.26□□□□□ -2.37
SRP54-207ENST00000555535 NDUFS6O75380 124 aaKnown RBP0.26□□□□□ -2.37
SRP54-207ENST00000555535 NDUFB2O95178 105 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 FADS2O95864 444 aaKnown RBP0.26□□□□□ -2.37
SRP54-207ENST00000555535 IL6P05231 212 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 PET100P0DJ07 73 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 CD24P25063 80 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 MSNP26038 577 aaKnown RBP0.26□□□□□ -2.37
SRP54-207ENST00000555535 PSMB8P28062 276 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 ALDH3A1P30838 453 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 CD79BP40259 229 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 ETV1P50549 477 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 FXYD7P58549 80 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 SNAP25P60880 206 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 RUNX1Q01196 453 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 JOSD1Q15040 202 aaPredicted RBP0.26□□□□□ -2.37
SRP54-207ENST00000555535 CDK10Q15131 360 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 MIAQ16674 131 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 EXOC3L4Q17RC7 722 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 DEFB115Q30KQ5 88 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 FBXO48Q5FWF7 155 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 CRLF3Q8IUI8 442 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 ZNF676Q8N7Q3 588 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 OR10D3Q8NH80 312 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 SLC37A2Q8TED4 501 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 ERMAPQ96PL5 475 aaPredicted RBP0.26□□□□□ -2.37
SRP54-207ENST00000555535 BBS2Q9BXC9 721 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 GNB1LQ9BYB4 327 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 TMEM222Q9H0R3 208 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 CYSTM1Q9H1C7 97 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 HRASLSQ9HDD0 168 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 TREM1Q9NP99 234 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 TIMM22Q9Y584 194 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 MAP3K19Q56UN5 1328 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 MYH7BA7E2Y1 1941 aa0.26□□□□□ -2.37
SRP54-207ENST00000555535 MCM3APO60318 1980 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms