RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 TMEM147Q9BVK8 224 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 ZNRD1Q9P1U0 126 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 ZNF729A6NN14 1252 aaPredicted RBP19.97■□□□□ 0.79
TMEM260-207ENST00000555497 IFNA17P01571 189 aa19.97■□□□□ 0.79
TMEM260-207ENST00000555497 NHLH1Q02575 133 aa19.97■□□□□ 0.79
TMEM260-207ENST00000555497 RBPJQ06330 500 aa19.97■□□□□ 0.79
TMEM260-207ENST00000555497 TMEM41BQ5BJD5 291 aa19.97■□□□□ 0.79
TMEM260-207ENST00000555497 SMCO4Q9NRQ5 59 aa19.97■□□□□ 0.79
TMEM260-207ENST00000555497 NDUFB7P17568 137 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 RELBQ01201 579 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 TFF3Q07654 80 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 ATP6V1FQ16864 119 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 AVPI1Q5T686 147 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 CENPVQ7Z7K6 275 aaPredicted RBP19.96■□□□□ 0.79
TMEM260-207ENST00000555497 LYG1Q8N1E2 194 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 ZNF383Q8NA42 475 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 KDF1Q8NAX2 398 aaPredicted RBP19.96■□□□□ 0.79
TMEM260-207ENST00000555497 VKORC1Q9BQB6 163 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 RAB9BQ9NP90 201 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 RAXQ9Y2V3 346 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 FAM90A9PA6NNJ1 464 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 E7EQL1 145 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 CRYBA1P05813 215 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 TMPRSS3P57727 454 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 RAB2AP61019 212 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 MRPS11P82912 194 aaKnown RBP19.96■□□□□ 0.79
TMEM260-207ENST00000555497 ACSM6Q6P461 480 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 SAP30LQ9HAJ7 183 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 TMEM140Q9NV12 185 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 GNG13Q9P2W3 67 aa19.96■□□□□ 0.79
TMEM260-207ENST00000555497 TRGV8A0A0C4DH27 118 aa19.95■□□□□ 0.78
TMEM260-207ENST00000555497 NQO2P16083 231 aa19.95■□□□□ 0.78
TMEM260-207ENST00000555497 MEOX2P50222 304 aa19.95■□□□□ 0.78
TMEM260-207ENST00000555497 ZNF787Q6DD87 383 aa19.95■□□□□ 0.78
TMEM260-207ENST00000555497 OR4A16Q8NH70 328 aa19.95■□□□□ 0.78
TMEM260-207ENST00000555497 TIMM9Q9Y5J7 89 aa19.95■□□□□ 0.78
TMEM260-207ENST00000555497 PUS1Q9Y606 427 aaKnown RBP eCLIP19.95■□□□□ 0.78
TMEM260-207ENST00000555497 LOC102723971A0A1B0GUV8 181 aa19.95■□□□□ 0.78
TMEM260-207ENST00000555497 TMEM178BH3BS89 294 aa19.95■□□□□ 0.78
TMEM260-207ENST00000555497 GFRA3O60609 400 aa19.95■□□□□ 0.78
TMEM260-207ENST00000555497 GNB2P62879 340 aa19.95■□□□□ 0.78
TMEM260-207ENST00000555497 RPP25LQ8N5L8 163 aaKnown RBP19.95■□□□□ 0.78
TMEM260-207ENST00000555497 CYB561D1Q8N8Q1 229 aa19.95■□□□□ 0.78
TMEM260-207ENST00000555497 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.95■□□□□ 0.78
TMEM260-207ENST00000555497 PINX1Q96BK5 328 aaKnown RBP19.95■□□□□ 0.78
TMEM260-207ENST00000555497 RPUSD1Q9UJJ7 312 aaKnown RBP19.95■□□□□ 0.78
TMEM260-207ENST00000555497 HSPB1P04792 205 aaKnown RBP19.94■□□□□ 0.78
TMEM260-207ENST00000555497 IFNA4P05014 189 aa19.94■□□□□ 0.78
TMEM260-207ENST00000555497 FGF7P21781 194 aa19.94■□□□□ 0.78
TMEM260-207ENST00000555497 KIR2DS2P43631 304 aa19.94■□□□□ 0.78
TMEM260-207ENST00000555497 CEBPGP53567 150 aa19.94■□□□□ 0.78
TMEM260-207ENST00000555497 ERVK-16P61578 105 aa19.94■□□□□ 0.78
TMEM260-207ENST00000555497 VWC2Q2TAL6 325 aa19.94■□□□□ 0.78
TMEM260-207ENST00000555497 RNASE6Q93091 150 aaKnown RBP19.94■□□□□ 0.78
TMEM260-207ENST00000555497 SLC25A10Q9UBX3 287 aaPredicted RBP19.94■□□□□ 0.78
TMEM260-207ENST00000555497 ARFGEF3Q5TH69 2177 aa19.94■□□□□ 0.78
TMEM260-207ENST00000555497 TRAV38-1A0A0B4J264 116 aa19.94■□□□□ 0.78
TMEM260-207ENST00000555497 SPCS3P61009 180 aa19.94■□□□□ 0.78
TMEM260-207ENST00000555497 NCMAPQ5T1S8 102 aa19.94■□□□□ 0.78
TMEM260-207ENST00000555497 SSX8Q7RTT4 187 aa19.94■□□□□ 0.78
TMEM260-207ENST00000555497 OR4S2Q8NH73 311 aa19.94■□□□□ 0.78
TMEM260-207ENST00000555497 ZCCHC14Q8WYQ9 949 aaKnown RBP19.94■□□□□ 0.78
TMEM260-207ENST00000555497 CCL17Q92583 94 aa19.94■□□□□ 0.78
TMEM260-207ENST00000555497 NKX6-3A6NJ46 265 aa19.93■□□□□ 0.78
TMEM260-207ENST00000555497 MDKP21741 143 aaPredicted RBP19.93■□□□□ 0.78
TMEM260-207ENST00000555497 VDAC2P45880 294 aaPredicted RBP19.93■□□□□ 0.78
TMEM260-207ENST00000555497 hADV38S2A0JD32 116 aa19.92■□□□□ 0.78
TMEM260-207ENST00000555497 ARG1P05089 322 aa19.92■□□□□ 0.78
TMEM260-207ENST00000555497 KHDC3LQ587J8 217 aa19.92■□□□□ 0.78
TMEM260-207ENST00000555497 LYPD2Q6UXB3 125 aa19.92■□□□□ 0.78
TMEM260-207ENST00000555497 EGLN1Q9GZT9 426 aa19.92■□□□□ 0.78
TMEM260-207ENST00000555497 LINC00312Q9Y6C7 94 aa19.92■□□□□ 0.78
TMEM260-207ENST00000555497 THBS3P49746 956 aa19.92■□□□□ 0.78
TMEM260-207ENST00000555497 SLC25A48Q6ZT89 311 aaKnown RBP19.92■□□□□ 0.78
TMEM260-207ENST00000555497 ISOC2Q96AB3 205 aa19.92■□□□□ 0.78
TMEM260-207ENST00000555497 PPIAL4EA0A075B759 164 aa19.91■□□□□ 0.78
TMEM260-207ENST00000555497 ZFP92A6NM28 416 aa19.91■□□□□ 0.78
TMEM260-207ENST00000555497 PPIAL4DF5H284 164 aa19.91■□□□□ 0.78
TMEM260-207ENST00000555497 TNFRSF13BO14836 293 aaPredicted RBP19.91■□□□□ 0.78
TMEM260-207ENST00000555497 PPIAL4FP0DN26 164 aa19.91■□□□□ 0.78
TMEM260-207ENST00000555497 OR52E5Q8NH55 327 aa19.91■□□□□ 0.78
TMEM260-207ENST00000555497 TMEM106BQ9NUM4 274 aa19.91■□□□□ 0.78
TMEM260-207ENST00000555497 PPIAL4AQ9Y536 164 aa19.91■□□□□ 0.78
TMEM260-207ENST00000555497 H3BQ15 152 aa19.91■□□□□ 0.78
TMEM260-207ENST00000555497 RRHO14718 337 aa19.91■□□□□ 0.78
TMEM260-207ENST00000555497 CCL3L1P16619 93 aa19.91■□□□□ 0.78
TMEM260-207ENST00000555497 PDLIM3Q53GG5 364 aaPredicted RBP19.91■□□□□ 0.78
TMEM260-207ENST00000555497 C2CD4CQ8TF44 421 aa19.91■□□□□ 0.78
TMEM260-207ENST00000555497 RHOVQ96L33 236 aa19.91■□□□□ 0.78
TMEM260-207ENST00000555497 NPCDR1Q9BY65 106 aa19.91■□□□□ 0.78
TMEM260-207ENST00000555497 SPTA1P02549 2419 aa19.91■□□□□ 0.78
TMEM260-207ENST00000555497 MAP1LC3B2A6NCE7 125 aa19.9■□□□□ 0.78
TMEM260-207ENST00000555497 RPL31P62899 125 aaKnown RBP19.9■□□□□ 0.78
TMEM260-207ENST00000555497 TMEM170AQ8WVE7 144 aa19.9■□□□□ 0.78
TMEM260-207ENST00000555497 MAP1LC3BQ9GZQ8 125 aa19.9■□□□□ 0.78
TMEM260-207ENST00000555497 NGBQ9NPG2 151 aa19.9■□□□□ 0.78
TMEM260-207ENST00000555497 RHEBQ15382 184 aa19.9■□□□□ 0.78
TMEM260-207ENST00000555497 TMEM200BQ69YZ2 307 aa19.9■□□□□ 0.78
TMEM260-207ENST00000555497 OR4A47Q6IF82 309 aa19.9■□□□□ 0.78
TMEM260-207ENST00000555497 Q8N7P7 452 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms