RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 C1QBP02746 253 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 CD7P09564 240 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 CPMP14384 443 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 RHOBP62745 196 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 TBPL2Q6SJ96 375 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 SLC22A24Q8N4F4 322 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 SPANXA2-OT1Q8N9U9 137 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 OR11H6Q8NGC7 330 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 OR13D1Q8NGV5 346 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 SGMS2Q8NHU3 365 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 GNPDA2Q8TDQ7 276 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 LMX1AQ8TE12 382 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 ZNF721Q8TF20 911 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 RTN4IP1Q8WWV3 396 aaPredicted RBP3.25□□□□□ -1.89
VRK1-203ENST00000555067 TMEM222Q9H0R3 208 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 GPR84Q9NQS5 396 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 MED29Q9NX70 200 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 SLC23A2Q9UGH3 650 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 NUP155O75694 1391 aa3.25□□□□□ -1.89
VRK1-203ENST00000555067 CDC42BPBQ9Y5S2 1711 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 LEUTXA8MZ59 168 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 TSTD3H0UI37 97 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 LHBP01229 141 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 ALDH3A1P30838 453 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 DEFA3P59666 94 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 GNA12Q03113 381 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 CAV1Q03135 178 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 CST6Q15828 149 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 TNFAIP8L3Q5GJ75 292 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 SAXO1Q8IYX7 474 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 RNF175Q8N4F7 328 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 C12orf29Q8N999 325 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 OR4K13Q8NH42 304 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 OR10J5Q8NHC4 309 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 RNASE6Q93091 150 aaKnown RBP3.24□□□□□ -1.89
VRK1-203ENST00000555067 C12orf43Q96C57 262 aaKnown RBP3.24□□□□□ -1.89
VRK1-203ENST00000555067 RPUSD1Q9UJJ7 312 aaKnown RBP3.24□□□□□ -1.89
VRK1-203ENST00000555067 PRNDQ9UKY0 176 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 RTL1A6NKG5 1358 aa3.24□□□□□ -1.89
VRK1-203ENST00000555067 DENND4BO75064 1496 aaPredicted RBP3.23□□□□□ -1.89
VRK1-203ENST00000555067 DSCAML1Q8TD84 2053 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 IGLV4-69A0A075B6H9 119 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 hCG_1818297A0A087WSY0 165 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 A0A0J9YY10 115 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 A0A1B0GX78 115 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 A0A1W2PQ67 120 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 A6NED7 52 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 A8MT66 165 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 G3V2T6 193 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.23□□□□□ -1.89
VRK1-203ENST00000555067 ZNF682O95780 498 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 IFI30P13284 250 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 ERP29P30040 261 aaKnown RBP3.23□□□□□ -1.89
VRK1-203ENST00000555067 ZNF140P52738 457 aaPredicted RBP3.23□□□□□ -1.89
VRK1-203ENST00000555067 GNG5P63218 68 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 GRK1Q15835 563 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 Q6ZS49 121 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 GPHB5Q86YW7 130 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 PACRGLQ8N7B6 248 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 ZNF615Q8N8J6 731 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 TMEM105Q8N8V8 129 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 PYURFQ96I23 114 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 IP6K3Q96PC2 410 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 KLF6Q99612 283 aaPredicted RBP3.23□□□□□ -1.89
VRK1-203ENST00000555067 LINC00588Q9Y4M8 146 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 BRWD3Q6RI45 1802 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 CABIN1Q9Y6J0 2220 aa3.23□□□□□ -1.89
VRK1-203ENST00000555067 PIRO00625 290 aa3.22□□□□□ -1.89
VRK1-203ENST00000555067 HMGN1P05114 100 aa3.22□□□□□ -1.89
VRK1-203ENST00000555067 HOXC5Q00444 222 aa3.22□□□□□ -1.89
VRK1-203ENST00000555067 ZNF283Q8N7M2 679 aa3.22□□□□□ -1.89
VRK1-203ENST00000555067 GRPEL2Q8TAA5 225 aa3.22□□□□□ -1.89
VRK1-203ENST00000555067 UBALD1Q8TB05 177 aa3.22□□□□□ -1.89
VRK1-203ENST00000555067 OR5P3Q8WZ94 311 aa3.22□□□□□ -1.89
VRK1-203ENST00000555067 RMI2Q96E14 147 aa3.22□□□□□ -1.89
VRK1-203ENST00000555067 COMMD5Q9GZQ3 224 aa3.22□□□□□ -1.89
VRK1-203ENST00000555067 AK3Q9UIJ7 227 aa3.22□□□□□ -1.89
VRK1-203ENST00000555067 TMEM56-RWDD3S4R434 201 aa3.22□□□□□ -1.89
VRK1-203ENST00000555067 SCN1AP35498 2009 aa3.22□□□□□ -1.89
VRK1-203ENST00000555067 SCN10AQ9Y5Y9 1956 aa3.21□□□□□ -1.89
VRK1-203ENST00000555067 MYH2Q9UKX2 1941 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 ZNF729A6NN14 1252 aaPredicted RBP3.21□□□□□ -1.9
VRK1-203ENST00000555067 DHFRP00374 187 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 C8GP07360 202 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 S100GP29377 79 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 PHBP35232 272 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 GLRXP35754 106 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 NCALDP61601 193 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 AKR1C8PQ5T2L2 129 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 IBA57Q5T440 356 aaKnown RBP3.21□□□□□ -1.9
VRK1-203ENST00000555067 TMEM78Q5T7P6 136 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 ZFP2Q6ZN57 461 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 SCXQ7RTU7 201 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 H1FOOQ8IZA3 346 aaPredicted RBP3.21□□□□□ -1.9
VRK1-203ENST00000555067 OSR2Q8N2R0 312 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 TMEM35BQ8NCS4 154 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 ZNF439Q8NDP4 499 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 ROPN1LQ96C74 230 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 GPR146Q96CH1 333 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 NMNAT3Q96T66 252 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms