RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 EGR1P18146 543 aa14.31□□□□□ -0.12
SHOX-204ENST00000554971 IL2RGP31785 369 aa14.31□□□□□ -0.12
SHOX-204ENST00000554971 RAB5BP61020 215 aa14.31□□□□□ -0.12
SHOX-204ENST00000554971 SMIM21Q3B7S5 101 aa14.31□□□□□ -0.12
SHOX-204ENST00000554971 ZNF506Q5JVG8 444 aa14.31□□□□□ -0.12
SHOX-204ENST00000554971 Q6ZRM9 215 aa14.31□□□□□ -0.12
SHOX-204ENST00000554971 FAM90A1Q86YD7 464 aa14.31□□□□□ -0.12
SHOX-204ENST00000554971 CIARTQ8N365 385 aaPredicted RBP14.31□□□□□ -0.12
SHOX-204ENST00000554971 OR14J1Q9UGF5 321 aa14.31□□□□□ -0.12
SHOX-204ENST00000554971 FBXO7Q9Y3I1 522 aa14.31□□□□□ -0.12
SHOX-204ENST00000554971 NDUFS8O00217 210 aa14.31□□□□□ -0.12
SHOX-204ENST00000554971 PPIHO43447 177 aaKnown RBP14.31□□□□□ -0.12
SHOX-204ENST00000554971 SCAF4O95104 1147 aaKnown RBP14.31□□□□□ -0.12
SHOX-204ENST00000554971 DSCR9P59020 149 aa14.31□□□□□ -0.12
SHOX-204ENST00000554971 KHDC3LQ587J8 217 aa14.31□□□□□ -0.12
SHOX-204ENST00000554971 SPNS3Q6ZMD2 512 aa14.31□□□□□ -0.12
SHOX-204ENST00000554971 M0R036 132 aa14.3□□□□□ -0.12
SHOX-204ENST00000554971 PSPNO60542 156 aa14.3□□□□□ -0.12
SHOX-204ENST00000554971 LY86O95711 162 aa14.3□□□□□ -0.12
SHOX-204ENST00000554971 IFNA4P05014 189 aa14.3□□□□□ -0.12
SHOX-204ENST00000554971 MAS1LP35410 378 aa14.3□□□□□ -0.12
SHOX-204ENST00000554971 CFHR2P36980 270 aa14.3□□□□□ -0.12
SHOX-204ENST00000554971 SLC25A24Q6NUK1 477 aa14.3□□□□□ -0.12
SHOX-204ENST00000554971 FGFRL1Q8N441 504 aa14.3□□□□□ -0.12
SHOX-204ENST00000554971 PRR18Q8N4B5 295 aa14.3□□□□□ -0.12
SHOX-204ENST00000554971 PINX1Q96BK5 328 aaKnown RBP14.3□□□□□ -0.12
SHOX-204ENST00000554971 PIMREGQ9BSJ6 248 aa14.3□□□□□ -0.12
SHOX-204ENST00000554971 RNF7Q9UBF6 113 aa14.3□□□□□ -0.12
SHOX-204ENST00000554971 IGHV4-61A0A0C4DH41 118 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 C12orf77C9JDV5 145 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 IGHV2-70P01814 119 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 EIF4EBP1Q13541 118 aaPredicted RBP14.29□□□□□ -0.12
SHOX-204ENST00000554971 PMS2P11Q13670 270 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 ATP6V1FQ16864 119 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 LRRC75BQ2VPJ9 315 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 ZNF66Q6ZN08 573 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 LINC00518Q8N0U6 118 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 ZNF561Q8N587 486 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 MAPK1IP1LQ8NDC0 245 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 CLCC1Q96S66 551 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 SAV1Q9H4B6 383 aaPredicted RBP14.29□□□□□ -0.12
SHOX-204ENST00000554971 TRAV39A0A0B4J263 110 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 C1orf196B1AJZ1 125 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 SRRM5B3KS81 715 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 RNF223E7ERA6 249 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 SNRNP70P08621 437 aaKnown RBP14.29□□□□□ -0.12
SHOX-204ENST00000554971 GPR6P46095 362 aaPredicted RBP14.29□□□□□ -0.12
SHOX-204ENST00000554971 OR3A1P47881 315 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 THNSL2Q86YJ6 484 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 CD300LFQ8TDQ1 290 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 LRRC29Q8WV35 223 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 MBD3L1Q8WWY6 194 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 MALSU1Q96EH3 234 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 TIMM9Q9Y5J7 89 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 CUBNO60494 3623 aa14.29□□□□□ -0.12
SHOX-204ENST00000554971 LRRC30A6NM36 301 aa14.28□□□□□ -0.12
SHOX-204ENST00000554971 GPR37O15354 613 aa14.28□□□□□ -0.12
SHOX-204ENST00000554971 HBZP02008 142 aa14.28□□□□□ -0.12
SHOX-204ENST00000554971 P0C879 139 aa14.28□□□□□ -0.12
SHOX-204ENST00000554971 ZNF16P17020 682 aaPredicted RBP14.28□□□□□ -0.12
SHOX-204ENST00000554971 HTD2P86397 168 aa14.28□□□□□ -0.12
SHOX-204ENST00000554971 SFT2D1Q8WV19 159 aa14.28□□□□□ -0.12
SHOX-204ENST00000554971 HIST1H2BAQ96A08 127 aa14.28□□□□□ -0.12
SHOX-204ENST00000554971 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.28□□□□□ -0.12
SHOX-204ENST00000554971 HSPB7Q9UBY9 170 aa14.28□□□□□ -0.12
SHOX-204ENST00000554971 A0A087WWC5 75 aa14.27□□□□□ -0.12
SHOX-204ENST00000554971 SRP19P09132 144 aaKnown RBP14.27□□□□□ -0.12
SHOX-204ENST00000554971 SLC25A16P16260 332 aa14.27□□□□□ -0.12
SHOX-204ENST00000554971 UBE2KP61086 200 aa14.27□□□□□ -0.12
SHOX-204ENST00000554971 CCL20P78556 96 aa14.27□□□□□ -0.12
SHOX-204ENST00000554971 OR1L1Q8NH94 360 aa14.27□□□□□ -0.12
SHOX-204ENST00000554971 TNFRSF9Q07011 255 aa14.27□□□□□ -0.13
SHOX-204ENST00000554971 TMEM14EPQ6UXP3 125 aa14.27□□□□□ -0.13
SHOX-204ENST00000554971 CENPVQ7Z7K6 275 aaPredicted RBP14.27□□□□□ -0.13
SHOX-204ENST00000554971 CLDND2Q8NHS1 167 aa14.27□□□□□ -0.13
SHOX-204ENST00000554971 PPP1R35Q8TAP8 253 aa14.27□□□□□ -0.13
SHOX-204ENST00000554971 COQ2Q96H96 371 aa14.27□□□□□ -0.13
SHOX-204ENST00000554971 CIB3Q96Q77 187 aaPredicted RBP14.27□□□□□ -0.13
SHOX-204ENST00000554971 HSD17B10Q99714 261 aaKnown RBP14.27□□□□□ -0.13
SHOX-204ENST00000554971 RARRES2Q99969 163 aa14.27□□□□□ -0.13
SHOX-204ENST00000554971 ABHD14AQ9BUJ0 271 aa14.27□□□□□ -0.13
SHOX-204ENST00000554971 RAB29O14966 203 aa14.26□□□□□ -0.13
SHOX-204ENST00000554971 SPINT2O43291 252 aa14.26□□□□□ -0.13
SHOX-204ENST00000554971 NDUFS6O75380 124 aaKnown RBP14.26□□□□□ -0.13
SHOX-204ENST00000554971 OR13C7P0DN81 318 aa14.26□□□□□ -0.13
SHOX-204ENST00000554971 IRF2P14316 349 aa14.26□□□□□ -0.13
SHOX-204ENST00000554971 GZMHP20718 246 aa14.26□□□□□ -0.13
SHOX-204ENST00000554971 RUNX1Q01196 453 aa14.26□□□□□ -0.13
SHOX-204ENST00000554971 C1orf87Q8N0U7 546 aa14.26□□□□□ -0.13
SHOX-204ENST00000554971 OR2D2Q9H210 308 aa14.26□□□□□ -0.13
SHOX-204ENST00000554971 NCOR1P1Q9H4R4 102 aa14.26□□□□□ -0.13
SHOX-204ENST00000554971 SETD2Q9BYW2 2564 aaPredicted RBP14.26□□□□□ -0.13
SHOX-204ENST00000554971 PPIAL4EA0A075B759 164 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 PPIAL4DF5H284 164 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 NXPH3O95157 252 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 PPIAL4FP0DN26 164 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 AESQ08117 197 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 TMEM267Q0VDI3 215 aaPredicted RBP14.25□□□□□ -0.13
SHOX-204ENST00000554971 ICAM4Q14773 271 aa14.25□□□□□ -0.13
SHOX-204ENST00000554971 KRBOX4Q5JUW0 171 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms