RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 FRMD6-AS1P0C7T7 363 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 S100GP29377 79 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 DSCR4P56555 118 aaPredicted RBP13.16□□□□□ -0.3
SYNE3-203ENST00000554873 RELBQ01201 579 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 WDR73Q6P4I2 378 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 PET117Q6UWS5 81 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 Q6ZS49 121 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 S100A7AQ86SG5 101 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 TSKUQ8WUA8 353 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 TMEM186Q96B77 213 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 SLC17A3O00476 420 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 TUSC2O75896 110 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 IGLC1P0CG04 106 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 ZNF32P17041 273 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 HTD2P86397 168 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 FAM19A2Q8N3H0 131 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 OCC1Q8TAD7 63 aa13.16□□□□□ -0.3
SYNE3-203ENST00000554873 LSM10Q969L4 123 aaKnown RBP13.16□□□□□ -0.3
SYNE3-203ENST00000554873 CACNA1EQ15878 2313 aa13.15□□□□□ -0.3
SYNE3-203ENST00000554873 GJE1A6NN92 205 aa13.15□□□□□ -0.3
SYNE3-203ENST00000554873 NUDT3O95989 172 aa13.15□□□□□ -0.3
SYNE3-203ENST00000554873 DAZAP2Q15038 168 aaPredicted RBP13.15□□□□□ -0.3
SYNE3-203ENST00000554873 RPEL1Q2QD12 228 aa13.15□□□□□ -0.3
SYNE3-203ENST00000554873 DCAF12Q5T6F0 453 aa13.15□□□□□ -0.3
SYNE3-203ENST00000554873 NEUROG1Q92886 237 aa13.15□□□□□ -0.3
SYNE3-203ENST00000554873 NTF3P20783 257 aa13.15□□□□□ -0.3
SYNE3-203ENST00000554873 FUT6P51993 359 aa13.15□□□□□ -0.3
SYNE3-203ENST00000554873 TRIP6Q15654 476 aaKnown RBP13.15□□□□□ -0.3
SYNE3-203ENST00000554873 C12orf54Q6X4T0 127 aa13.15□□□□□ -0.3
SYNE3-203ENST00000554873 ST6GALNAC3Q8NDV1 305 aa13.15□□□□□ -0.3
SYNE3-203ENST00000554873 OCIAD1Q9NX40 245 aa13.15□□□□□ -0.3
SYNE3-203ENST00000554873 PEF1Q9UBV8 284 aaKnown RBP13.15□□□□□ -0.3
SYNE3-203ENST00000554873 ZNF816-ZNF321PA0A0X1KG74 233 aa13.14□□□□□ -0.31
SYNE3-203ENST00000554873 CD5LO43866 347 aa13.14□□□□□ -0.31
SYNE3-203ENST00000554873 B4GALT1P15291 398 aa13.14□□□□□ -0.31
SYNE3-203ENST00000554873 TMEM14EPQ6UXP3 125 aa13.14□□□□□ -0.31
SYNE3-203ENST00000554873 MMD2Q8IY49 270 aa13.14□□□□□ -0.31
SYNE3-203ENST00000554873 ZDHHC23Q8IYP9 409 aa13.14□□□□□ -0.31
SYNE3-203ENST00000554873 OR1K1Q8NGR3 316 aa13.14□□□□□ -0.31
SYNE3-203ENST00000554873 PIGCQ92535 297 aa13.14□□□□□ -0.31
SYNE3-203ENST00000554873 RDH5Q92781 318 aa13.14□□□□□ -0.31
SYNE3-203ENST00000554873 TMEM147Q9BVK8 224 aa13.14□□□□□ -0.31
SYNE3-203ENST00000554873 TMEM38BQ9NVV0 291 aa13.14□□□□□ -0.31
SYNE3-203ENST00000554873 PSG2P11465 335 aa13.14□□□□□ -0.31
SYNE3-203ENST00000554873 COX19Q49B96 90 aa13.14□□□□□ -0.31
SYNE3-203ENST00000554873 FGFBP3Q8TAT2 258 aa13.14□□□□□ -0.31
SYNE3-203ENST00000554873 SMPXQ9UHP9 88 aa13.14□□□□□ -0.31
SYNE3-203ENST00000554873 MUC21A0A0G2JKD1 596 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 LY6G6EA0A0G2JKS1 128 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 MUC21A0A140T8X8 626 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 OR7C1O76099 320 aaPredicted RBP13.13□□□□□ -0.31
SYNE3-203ENST00000554873 SCTP09683 121 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 RBM11P57052 281 aaKnown RBP13.13□□□□□ -0.31
SYNE3-203ENST00000554873 TMEM249Q2WGJ8 235 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 KIAA1644Q3SXP7 199 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 MUC21Q5SSG8 566 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 TMEM108Q6UXF1 575 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 WFDC12Q8WWY7 111 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 SGCZQ96LD1 299 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 TXNDC17Q9BRA2 123 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 U3KQA8 63 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 TRAV8-6A0A0B4J262 113 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 hCG_38984A0A1B0GV85 526 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 SCGB1A1P11684 91 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 SRSF7Q16629 238 aaKnown RBP eCLIP13.13□□□□□ -0.31
SYNE3-203ENST00000554873 KRTAP27-1Q3LI81 207 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 Q56UQ5 140 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 OR2Y1Q8NGV0 311 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 OR51H1Q8NH63 302 aa13.13□□□□□ -0.31
SYNE3-203ENST00000554873 LOC102723996A0A087X1L8 192 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 SMPD2O60906 423 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 SRIP30626 198 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 IGFBP7Q16270 282 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 TBR1Q16650 682 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 PLCXD3Q63HM9 321 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 SCCPDHQ8NBX0 429 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 ZNF439Q8NDP4 499 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 OR1B1Q8NGR6 318 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 IMMP1LQ96LU5 166 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 IGHV1-45A0A0A0MS14 117 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 LINC00869P0C866 280 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 SELENOVP59797 346 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 PSG7Q13046 419 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 TMEM136Q6ZRR5 245 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 CPT1CQ8TCG5 803 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 KIAA1549Q9HCM3 1950 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 ARF1P84077 181 aaKnown RBP13.12□□□□□ -0.31
SYNE3-203ENST00000554873 HLA-BQ31612 363 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 OR8I2Q8N0Y5 310 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 ST20Q9HBF5 79 aa13.12□□□□□ -0.31
SYNE3-203ENST00000554873 PI4KAP42356 2102 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 ARHGAP21Q5T5U3 1957 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 RAC3P60763 192 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 OR8B3Q8NGG8 313 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 NINJ1Q92982 152 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 OR8B2Q96RD0 313 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 NPCDR1Q9BY65 106 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 OR2H1Q9GZK4 316 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 SH2D2AQ9NP31 389 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 A0A1B0GV72 72 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms