RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 DNAJC4Q9NNZ3 241 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 KCNMB2Q9Y691 235 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 IGKV3D-15A0A087WSY6 115 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 CGB1A6NKQ9 187 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 AHRRA9YTQ3 701 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 IGKV3-15P01624 115 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 LGALS3P17931 250 aaKnown RBP11.94□□□□□ -0.5
VTI1B-204ENST00000554659 LOXL3P58215 753 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 ITLN1Q8WWA0 313 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 MAP1LC3AQ9H492 121 aa11.94□□□□□ -0.5
VTI1B-204ENST00000554659 J3QW42 95 aa11.93□□□□□ -0.5
VTI1B-204ENST00000554659 OR4A5Q8NH83 315 aa11.93□□□□□ -0.5
VTI1B-204ENST00000554659 C7orf71A4D174 169 aa11.93□□□□□ -0.5
VTI1B-204ENST00000554659 TFPI2P48307 235 aa11.93□□□□□ -0.5
VTI1B-204ENST00000554659 HCP5Q6MZN7 132 aa11.93□□□□□ -0.5
VTI1B-204ENST00000554659 BEX4Q9NWD9 120 aaPredicted RBP11.93□□□□□ -0.5
VTI1B-204ENST00000554659 FOXJ2Q9P0K8 574 aa11.93□□□□□ -0.5
VTI1B-204ENST00000554659 ZDHHC8Q9ULC8 765 aa11.93□□□□□ -0.5
VTI1B-204ENST00000554659 COX6A1P12074 109 aa11.93□□□□□ -0.5
VTI1B-204ENST00000554659 NUBP1P53384 320 aa11.93□□□□□ -0.5
VTI1B-204ENST00000554659 REC114Q7Z4M0 266 aa11.93□□□□□ -0.5
VTI1B-204ENST00000554659 TMEM183AQ8IXX5 376 aa11.93□□□□□ -0.5
VTI1B-204ENST00000554659 GALNT14Q96FL9 552 aa11.93□□□□□ -0.5
VTI1B-204ENST00000554659 KLK15Q9H2R5 256 aa11.93□□□□□ -0.5
VTI1B-204ENST00000554659 FAM53AQ6NSI3 398 aaPredicted RBP11.93□□□□□ -0.5
VTI1B-204ENST00000554659 SFRP2Q96HF1 295 aa11.93□□□□□ -0.5
VTI1B-204ENST00000554659 OPN3Q9H1Y3 402 aaPredicted RBP11.93□□□□□ -0.5
VTI1B-204ENST00000554659 MTURNQ8N3F0 131 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 OR10AG1Q8NH19 301 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 MRPL32Q9BYC8 188 aaKnown RBP11.92□□□□□ -0.5
VTI1B-204ENST00000554659 RND2P52198 227 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 ATP5IP56385 69 aaPredicted RBP11.92□□□□□ -0.5
VTI1B-204ENST00000554659 CTAG1AP78358 180 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 ST6GALNAC3Q8NDV1 305 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 C16orf92Q96LL3 132 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 TCF19Q9Y242 345 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 COL11A1P12107 1806 aaPredicted RBP11.92□□□□□ -0.5
VTI1B-204ENST00000554659 MSGN1A6NI15 193 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 PCOLCEQ15113 449 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 DRAM1Q8N682 238 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 OR10J6PQ8NGY7 276 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 IGHV3-72A0A0B4J1Y9 119 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 LOC101059948A0A1B0GTJ6 334 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 ZIC3O60481 467 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 LINC00114Q6XXX2 140 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 SRSF12Q8WXF0 261 aaKnown RBP11.92□□□□□ -0.5
VTI1B-204ENST00000554659 LPAR2Q9HBW0 351 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 ZNFX1Q9P2E3 1918 aaKnown RBP11.92□□□□□ -0.5
VTI1B-204ENST00000554659 IFNL4K9M1U5 179 aa11.92□□□□□ -0.5
VTI1B-204ENST00000554659 CRYBB3P26998 211 aa11.91□□□□□ -0.5
VTI1B-204ENST00000554659 TSPAN13O95857 204 aa11.91□□□□□ -0.5
VTI1B-204ENST00000554659 RPS20P60866 119 aaKnown RBP11.91□□□□□ -0.5
VTI1B-204ENST00000554659 OR5P3Q8WZ94 311 aa11.91□□□□□ -0.5
VTI1B-204ENST00000554659 RNF222A6NCQ9 220 aa11.91□□□□□ -0.5
VTI1B-204ENST00000554659 ZNF146Q15072 292 aa11.91□□□□□ -0.5
VTI1B-204ENST00000554659 KLF14Q8TD94 323 aaPredicted RBP11.91□□□□□ -0.5
VTI1B-204ENST00000554659 CABIN1Q9Y6J0 2220 aa11.91□□□□□ -0.5
VTI1B-204ENST00000554659 TM4SF20Q53R12 229 aa11.91□□□□□ -0.5
VTI1B-204ENST00000554659 EBLN2Q6P2I7 272 aa11.91□□□□□ -0.5
VTI1B-204ENST00000554659 SGK494Q96LW2 274 aa11.91□□□□□ -0.5
VTI1B-204ENST00000554659 ANKRD31Q8N7Z5 1873 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 CKAP5Q14008 2032 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 UBE2L6O14933 153 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 ZNHIT1O43257 154 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 LCN2P80188 198 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 MBNL2Q5VZF2 373 aaKnown RBP11.9□□□□□ -0.5
VTI1B-204ENST00000554659 SAP25Q8TEE9 199 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 NDUFA2O43678 99 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 SS18L1O75177 396 aaPredicted RBP11.9□□□□□ -0.5
VTI1B-204ENST00000554659 IL4P05112 153 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 SYT8Q8NBV8 401 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 RCC1LQ96I51 464 aaKnown RBP11.9□□□□□ -0.5
VTI1B-204ENST00000554659 LINC00470Q9BZP3 86 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 RPRMQ9NS64 109 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 SEC16AO15027 2179 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 LDLRAD4O15165 306 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 BTCP35070 178 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 GCSAMLQ5JQS6 135 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 BIVMQ86UB2 503 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 OR51G1Q8NGK1 321 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 PHLDA3Q9Y5J5 127 aa11.9□□□□□ -0.5
VTI1B-204ENST00000554659 A0A1B0GV72 72 aa11.9□□□□□ -0.51
VTI1B-204ENST00000554659 GCHFRP30047 84 aa11.9□□□□□ -0.51
VTI1B-204ENST00000554659 CIRBPQ14011 172 aaKnown RBP11.9□□□□□ -0.51
VTI1B-204ENST00000554659 TCF24Q7RTU0 167 aa11.9□□□□□ -0.51
VTI1B-204ENST00000554659 SPSB2Q99619 263 aa11.9□□□□□ -0.51
VTI1B-204ENST00000554659 RTBDNQ9BSG5 229 aaPredicted RBP11.9□□□□□ -0.51
VTI1B-204ENST00000554659 TRAV14DV4A0A0A6YYC5 116 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 ADRA2AP08913 450 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 ANOS1P23352 680 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 JOSD1Q15040 202 aaPredicted RBP11.89□□□□□ -0.51
VTI1B-204ENST00000554659 NABP2Q9BQ15 211 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 UBTD1Q9HAC8 227 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 PEF1Q9UBV8 284 aaKnown RBP11.89□□□□□ -0.51
VTI1B-204ENST00000554659 NRXN2Q9P2S2 1712 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 IGKV3D-11A0A0A0MRZ8 115 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 LOC105371267A0A1B0GV96 52 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 MEIG1Q5JSS6 88 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 DMRTA1Q5VZB9 504 aa11.89□□□□□ -0.51
VTI1B-204ENST00000554659 OR4D5Q8NGN0 318 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms