RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 HBZP02008 142 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 AKR1C4P17516 323 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 NFYAP23511 347 aaPredicted RBP8.34□□□□□ -1.07
SHMT2-215ENST00000554656 ARHGDIBP52566 201 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 PRRX1P54821 245 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 RAP2BP61225 183 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 RPL23AP62750 156 aaKnown RBP8.34□□□□□ -1.07
SHMT2-215ENST00000554656 CCDC144NLQ6NUI1 221 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 DRAM1Q8N682 238 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 ZBTB34Q8NCN2 500 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 ADAD2Q8NCV1 583 aaKnown RBP8.34□□□□□ -1.07
SHMT2-215ENST00000554656 OR10A7Q8NGE5 316 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 OR52B4Q8NGK2 314 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 OR9G1Q8NH87 305 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 COQ8AQ8NI60 647 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 EDARADDQ8WWZ3 215 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 RPEQ96AT9 228 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 ZNF436Q9C0F3 470 aaPredicted RBP8.34□□□□□ -1.07
SHMT2-215ENST00000554656 RANGRFQ9HD47 186 aaPredicted RBP8.34□□□□□ -1.07
SHMT2-215ENST00000554656 SLC2A9Q9NRM0 540 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 IDI2-AS1Q9NZ38 188 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 MGAT4CQ9UBM8 478 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 LINC00527Q9UJ94 153 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 JPT1Q9UK76 154 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 PSG11Q9UQ72 335 aa8.34□□□□□ -1.07
SHMT2-215ENST00000554656 DBX1A6NMT0 343 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 C15orf65H3BRN8 121 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 BOLA2-SMG1P6H3BVE0 249 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 M0QZK8 103 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 YPEL1O60688 119 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 SNAPC5O75971 98 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 RGS11O94810 467 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 C1QBP02746 253 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 VAMP1P23763 118 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 SSTR5P35346 364 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 THBS3P49746 956 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 GNG10P50151 68 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 LUMP51884 338 aaPredicted RBP8.33□□□□□ -1.08
SHMT2-215ENST00000554656 PIGPP57054 158 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 FXYD4P59646 89 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 SUPT4H1P63272 117 aaKnown RBP8.33□□□□□ -1.08
SHMT2-215ENST00000554656 SRPXP78539 464 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 LTC4SQ16873 150 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 Q3ZCU0 254 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 ZFP69Q49AA0 526 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 FAM53AQ6NSI3 398 aaPredicted RBP8.33□□□□□ -1.08
SHMT2-215ENST00000554656 THNSL2Q86YJ6 484 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 CMTM1Q8IZ96 169 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 LRTM2Q8N967 370 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 OR10V1Q8NGI7 309 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 OR52M1Q8NGK5 317 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 OR5M8Q8NGP6 311 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 RFESDQ8TAC1 157 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 MRGPRDQ8TDS7 321 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 ARL11Q969Q4 196 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 RBMXL1Q96E39 390 aaKnown RBP8.33□□□□□ -1.08
SHMT2-215ENST00000554656 YPEL2Q96QA6 119 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 SLC5A7Q9GZV3 580 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 NAA60Q9H7X0 242 aa8.33□□□□□ -1.08
SHMT2-215ENST00000554656 TEX13DA0A0J9YY54 714 aaPredicted RBP8.32□□□□□ -1.08
SHMT2-215ENST00000554656 A0A1W2PPE3 182 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 LINC01548A6NM66 108 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 FAM106CPP0CH98 169 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 TMEM11P17152 192 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 CXCL3P19876 107 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 GNRHRP30968 328 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 CEACAM6P40199 344 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 CD300CQ08708 224 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 HNF4GQ14541 408 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 LIN54Q6MZP7 749 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 C8orf86Q6ZUL3 223 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 TCTEX1D1Q8N7M0 179 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 BVESQ8NE79 360 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 OR1L1Q8NH94 360 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 SECTM1Q8WVN6 248 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 RTN4IP1Q8WWV3 396 aaPredicted RBP8.32□□□□□ -1.08
SHMT2-215ENST00000554656 IL1F10Q8WWZ1 152 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 DUX3Q96PT4 197 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 FYTTD1Q96QD9 318 aaKnown RBP8.32□□□□□ -1.08
SHMT2-215ENST00000554656 P2RX4Q99571 388 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 RDH8Q9NYR8 311 aa8.32□□□□□ -1.08
SHMT2-215ENST00000554656 AMMECR1Q9Y4X0 333 aaPredicted RBP8.32□□□□□ -1.08
SHMT2-215ENST00000554656 IGHV3-72A0A0B4J1Y9 119 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 IGKV1D-13A0A0B4J2D9 117 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 DUXBA0A1W2PPF3 345 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 FGF16O43320 207 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 IGKV1D-33P01593 117 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 IGKV1-33P01594 117 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 IGHG2P01859 326 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 IGKV1-13P0DP09 117 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 PI3P19957 117 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 EIF2B2P49770 351 aaKnown RBP8.31□□□□□ -1.08
SHMT2-215ENST00000554656 CYCSP99999 105 aaKnown RBP8.31□□□□□ -1.08
SHMT2-215ENST00000554656 HES1Q14469 280 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 DEFB121Q5J5C9 76 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 NOXA1Q86UR1 476 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 OR8H3Q8N146 312 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 Q8N6K4 173 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 UBALD1Q8TB05 177 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 HYLS1Q96M11 299 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms