RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 TPTE2P1Q5T6R2 138 aa13.05□□□□□ -0.32
NEK9-204ENST00000554258 LHFPL1Q86WI0 220 aa13.05□□□□□ -0.32
NEK9-204ENST00000554258 OR4D10Q8NGI6 311 aa13.05□□□□□ -0.32
NEK9-204ENST00000554258 OR10X1Q8NGY0 326 aa13.05□□□□□ -0.32
NEK9-204ENST00000554258 OR6F1Q8NGZ6 308 aa13.05□□□□□ -0.32
NEK9-204ENST00000554258 PIPOXQ9P0Z9 390 aa13.05□□□□□ -0.32
NEK9-204ENST00000554258 IGKV1D-13A0A0B4J2D9 117 aa13.04□□□□□ -0.32
NEK9-204ENST00000554258 RAB29O14966 203 aa13.04□□□□□ -0.32
NEK9-204ENST00000554258 DEDDO75618 318 aa13.04□□□□□ -0.32
NEK9-204ENST00000554258 PPYP01298 95 aa13.04□□□□□ -0.32
NEK9-204ENST00000554258 IGKV1-13P0DP09 117 aa13.04□□□□□ -0.32
NEK9-204ENST00000554258 IL3RAP26951 378 aa13.04□□□□□ -0.32
NEK9-204ENST00000554258 AP3S2P59780 193 aa13.04□□□□□ -0.32
NEK9-204ENST00000554258 MSMO1Q15800 293 aa13.04□□□□□ -0.32
NEK9-204ENST00000554258 FAM71F2Q6NXP2 309 aa13.04□□□□□ -0.32
NEK9-204ENST00000554258 ZNF833PQ6ZTB9 187 aa13.04□□□□□ -0.32
NEK9-204ENST00000554258 SGPP2Q8IWX5 399 aa13.04□□□□□ -0.32
NEK9-204ENST00000554258 TOMM5Q8N4H5 51 aa13.04□□□□□ -0.32
NEK9-204ENST00000554258 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.04□□□□□ -0.32
NEK9-204ENST00000554258 OR11H1Q8NG94 326 aa13.04□□□□□ -0.32
NEK9-204ENST00000554258 OR4C16Q8NGL9 310 aa13.04□□□□□ -0.32
NEK9-204ENST00000554258 MOB3AQ96BX8 217 aa13.04□□□□□ -0.32
NEK9-204ENST00000554258 VPS13DQ5THJ4 4388 aa13.03□□□□□ -0.32
NEK9-204ENST00000554258 SLC22A5O76082 557 aa13.03□□□□□ -0.32
NEK9-204ENST00000554258 IGLV2-14P01704 120 aa13.03□□□□□ -0.32
NEK9-204ENST00000554258 UCP3P55916 312 aa13.03□□□□□ -0.32
NEK9-204ENST00000554258 DIAPH2-AS1Q14236 149 aa13.03□□□□□ -0.32
NEK9-204ENST00000554258 AADACL3Q5VUY0 350 aa13.03□□□□□ -0.32
NEK9-204ENST00000554258 STPG2Q8N412 459 aa13.03□□□□□ -0.32
NEK9-204ENST00000554258 C4orf3Q8WVX3 66 aa13.03□□□□□ -0.32
NEK9-204ENST00000554258 ABHD14BQ96IU4 210 aa13.03□□□□□ -0.32
NEK9-204ENST00000554258 ZNF2Q9BSG1 426 aaPredicted RBP13.03□□□□□ -0.32
NEK9-204ENST00000554258 RETNQ9HD89 108 aa13.03□□□□□ -0.32
NEK9-204ENST00000554258 HRASLSQ9HDD0 168 aa13.03□□□□□ -0.32
NEK9-204ENST00000554258 SLC2A8Q9NY64 477 aa13.03□□□□□ -0.32
NEK9-204ENST00000554258 RNF150Q9ULK6 438 aa13.03□□□□□ -0.32
NEK9-204ENST00000554258 SAA2-SAA4A0A096LPE2 208 aa13.02□□□□□ -0.33
NEK9-204ENST00000554258 GAPDHP04406 335 aaKnown RBP13.02□□□□□ -0.33
NEK9-204ENST00000554258 OR8U8P0C7N1 319 aa13.02□□□□□ -0.33
NEK9-204ENST00000554258 SAA2P0DJI9 122 aaPredicted RBP13.02□□□□□ -0.33
NEK9-204ENST00000554258 TSPAN5P62079 268 aa13.02□□□□□ -0.33
NEK9-204ENST00000554258 TRIQKQ629K1 86 aa13.02□□□□□ -0.33
NEK9-204ENST00000554258 TMEM17Q86X19 198 aa13.02□□□□□ -0.33
NEK9-204ENST00000554258 FOXRED2Q8IWF2 684 aa13.02□□□□□ -0.33
NEK9-204ENST00000554258 OR8H3Q8N146 312 aa13.02□□□□□ -0.33
NEK9-204ENST00000554258 OR56B4Q8NH76 319 aa13.02□□□□□ -0.33
NEK9-204ENST00000554258 TERB2Q8NHR7 220 aa13.02□□□□□ -0.33
NEK9-204ENST00000554258 RTN4IP1Q8WWV3 396 aaPredicted RBP13.02□□□□□ -0.33
NEK9-204ENST00000554258 C5orf30Q96GV9 206 aa13.02□□□□□ -0.33
NEK9-204ENST00000554258 FAM110AQ9BQ89 295 aa13.02□□□□□ -0.33
NEK9-204ENST00000554258 SDHAF2Q9NX18 166 aa13.02□□□□□ -0.33
NEK9-204ENST00000554258 ZNF221Q9UK13 617 aa13.02□□□□□ -0.33
NEK9-204ENST00000554258 A0A1W2PPI3 338 aa13.01□□□□□ -0.33
NEK9-204ENST00000554258 OR5H14A6NHG9 310 aa13.01□□□□□ -0.33
NEK9-204ENST00000554258 FAM90A9PA6NNJ1 464 aa13.01□□□□□ -0.33
NEK9-204ENST00000554258 DISC1C4P0D8 188 aa13.01□□□□□ -0.33
NEK9-204ENST00000554258 J3QRK9 145 aa13.01□□□□□ -0.33
NEK9-204ENST00000554258 PLA2G10O15496 165 aa13.01□□□□□ -0.33
NEK9-204ENST00000554258 TXNL1O43396 289 aa13.01□□□□□ -0.33
NEK9-204ENST00000554258 EIF4EBP1Q13541 118 aaPredicted RBP13.01□□□□□ -0.33
NEK9-204ENST00000554258 CCDC144NLQ6NUI1 221 aa13.01□□□□□ -0.33
NEK9-204ENST00000554258 SLC35E3Q7Z769 313 aa13.01□□□□□ -0.33
NEK9-204ENST00000554258 Q8N1Y9 231 aa13.01□□□□□ -0.33
NEK9-204ENST00000554258 ZNF645Q8N7E2 425 aa13.01□□□□□ -0.33
NEK9-204ENST00000554258 MRGPRFQ96AM1 343 aa13.01□□□□□ -0.33
NEK9-204ENST00000554258 RPEQ96AT9 228 aa13.01□□□□□ -0.33
NEK9-204ENST00000554258 S1PR3Q99500 378 aa13.01□□□□□ -0.33
NEK9-204ENST00000554258 C7orf50Q9BRJ6 194 aaKnown RBP13.01□□□□□ -0.33
NEK9-204ENST00000554258 OR2D2Q9H210 308 aa13.01□□□□□ -0.33
NEK9-204ENST00000554258 KIAA1456Q9P272 454 aa13.01□□□□□ -0.33
NEK9-204ENST00000554258 IGHV1-3A0A0C4DH29 117 aa13□□□□□ -0.33
NEK9-204ENST00000554258 HSD17B6O14756 317 aa13□□□□□ -0.33
NEK9-204ENST00000554258 GNRHRP30968 328 aa13□□□□□ -0.33
NEK9-204ENST00000554258 FAUP35544 74 aaKnown RBP13□□□□□ -0.33
NEK9-204ENST00000554258 GPR12P47775 334 aa13□□□□□ -0.33
NEK9-204ENST00000554258 HERV-K104P61576 105 aa13□□□□□ -0.33
NEK9-204ENST00000554258 IFITM3Q01628 133 aa13□□□□□ -0.33
NEK9-204ENST00000554258 RPL39P5Q59GN2 51 aa13□□□□□ -0.33
NEK9-204ENST00000554258 ZNF57Q68EA5 555 aaPredicted RBP13□□□□□ -0.33
NEK9-204ENST00000554258 FAAP20Q6NZ36 180 aa13□□□□□ -0.33
NEK9-204ENST00000554258 THNSL2Q86YJ6 484 aa13□□□□□ -0.33
NEK9-204ENST00000554258 FAM71E2Q8N5Q1 922 aa13□□□□□ -0.33
NEK9-204ENST00000554258 ZBTB34Q8NCN2 500 aa13□□□□□ -0.33
NEK9-204ENST00000554258 TOMM40LQ969M1 308 aa13□□□□□ -0.33
NEK9-204ENST00000554258 PRRT1Q99946 306 aa13□□□□□ -0.33
NEK9-204ENST00000554258 NABP2Q9BQ15 211 aa13□□□□□ -0.33
NEK9-204ENST00000554258 FXYD6Q9H0Q3 95 aa13□□□□□ -0.33
NEK9-204ENST00000554258 PLA2G2EQ9NZK7 142 aa13□□□□□ -0.33
NEK9-204ENST00000554258 RBM7Q9Y580 266 aaKnown RBP13□□□□□ -0.33
NEK9-204ENST00000554258 NAP1L6A6NFF2 107 aa12.99□□□□□ -0.33
NEK9-204ENST00000554258 OVOL1O14753 267 aa12.99□□□□□ -0.33
NEK9-204ENST00000554258 UPK1BO75841 260 aa12.99□□□□□ -0.33
NEK9-204ENST00000554258 CT45A6P0DMU7 189 aa12.99□□□□□ -0.33
NEK9-204ENST00000554258 CT45A5P0DMU8 189 aa12.99□□□□□ -0.33
NEK9-204ENST00000554258 CT45A7P0DMV0 189 aa12.99□□□□□ -0.33
NEK9-204ENST00000554258 FOXE3Q13461 319 aa12.99□□□□□ -0.33
NEK9-204ENST00000554258 TGIF2LXQ8IUE1 241 aa12.99□□□□□ -0.33
NEK9-204ENST00000554258 BVESQ8NE79 360 aa12.99□□□□□ -0.33
NEK9-204ENST00000554258 OR51S1Q8NGJ8 323 aa12.99□□□□□ -0.33
NEK9-204ENST00000554258 OR13C8Q8NGS7 320 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms