RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 S100A16Q96FQ6 103 aaKnown RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 NUDT11Q96G61 164 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 SIRPDQ9H106 197 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 RAB9BQ9NP90 201 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 CLEC5AQ9NY25 188 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 COPZ2Q9P299 210 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 FBXL17Q9UF56 701 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 MOB4Q9Y3A3 225 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 TNFRSF18Q9Y5U5 241 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 HSPE1-MOB4S4R3N1 261 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 GAGE10A6NGK3 116 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 FAM90A20PA6NIJ5 464 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 CGB1A6NKQ9 187 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 ZNF729A6NN14 1252 aaPredicted RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 M0R1W7 72 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 SLC22A1O15245 554 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 PFDN1O60925 122 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 CA2P00918 260 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 IGKV1-16P04430 117 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 ISG15P05161 165 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 HOXB6P17509 224 aaKnown RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 GABRB1P18505 474 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 OTX1P32242 354 aaPredicted RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 GPR183P32249 361 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 ALDH3B2P48448 385 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 CEBPGP53567 150 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 ELLP55199 621 aaPredicted RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 ZP1P60852 638 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 ISL1P61371 349 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 CX3CL1P78423 397 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 OR2F1Q13607 317 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 DOC2BQ14184 412 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 VMA21Q3ZAQ7 101 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 PYDC2Q56P42 97 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 TMEM88Q6PEY1 159 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 PLET1Q6UQ28 207 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 CMTM1Q8IZ96 169 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 SELENOHQ8IZQ5 122 aaKnown RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 SREK1IP1Q8N9Q2 155 aaPredicted RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 OR13F1Q8NGS4 319 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 DTD1Q8TEA8 209 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 NRG4Q8WWG1 115 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 C12orf43Q96C57 262 aaKnown RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 DAZAP1Q96EP5 407 aaKnown RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 ACY3Q96HD9 319 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 HIPK2Q9H2X6 1198 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 SAV1Q9H4B6 383 aaPredicted RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 GPN1Q9HCN4 374 aaPredicted RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 HEYLQ9NQ87 328 aaPredicted RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 ZFP57Q9NU63 452 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 CNOT2Q9NZN8 540 aaKnown RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 DIMT1Q9UNQ2 313 aaKnown RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 SAA2-SAA4A0A096LPE2 208 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 A0A0A6YYH2 397 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 TRAV41A0A0B4J266 112 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 A0A1B0GUS0 222 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 SCO2A0A1W2PP80 73 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 A6NJ64 397 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 ZNF98A6NK75 572 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 PCP4L1A6NKN8 68 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 MARCH11A6NNE9 402 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 H3BP45 60 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 TNFRSF13BO14836 293 aaPredicted RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 RAB29O14966 203 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 IFNA10P01566 189 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 AMY2AP04746 511 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 CDK1P06493 297 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 SAA2P0DJI9 122 aaPredicted RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 OR5H8P0DN80 308 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 NQO2P16083 231 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 MC5RP33032 325 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 ETV6P41212 452 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 NDPQ00604 133 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 LSAMPQ13449 338 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 C5orf64Q2M2E5 130 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 CT45A1Q5HYN5 189 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 LDLRAD2Q5SZI1 272 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 CD300LDQ6UXZ3 194 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 SYS1Q8N2H4 156 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 STXBP6Q8NFX7 210 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 OR4B1Q8NGF8 309 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 OR52B4Q8NGK2 314 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 OR4P4Q8NGL7 312 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 OR1N2Q8NGR9 330 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 OR4A16Q8NH70 328 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 CT45A3Q8NHU0 189 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 MCFD2Q8NI22 146 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 OCC1Q8TAD7 63 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 RNASE8Q8TDE3 154 aaKnown RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 GPX8Q8TED1 209 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 CHPT1Q8WUD6 406 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 RGP1Q92546 391 aaPredicted RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 SDSLQ96GA7 329 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 RITA1Q96K30 269 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 LINC00052Q96N35 136 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 HSPB9Q9BQS6 159 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 ZNF2Q9BSG1 426 aaPredicted RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 C1orf43Q9BWL3 253 aa2□□□□□ -2.09
PRPF39-205ENST00000554081 C11orf54Q9H0W9 315 aaPredicted RBP2□□□□□ -2.09
PRPF39-205ENST00000554081 SLC25A22Q9H936 323 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms