RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 LIMS4P0CW20 117 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 DBTP11182 482 aaKnown RBP2.29□□□□□ -2.04
SLIRP-202ENST00000553981 GZMHP20718 246 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 KIR2DS2P43631 304 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 ARHGDIBP52566 201 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 Q3ZCU0 254 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 AKIRIN2Q53H80 203 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 ACTBL2Q562R1 376 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 C10orf55Q5SWW7 151 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 ATAD3CQ5T2N8 411 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 OR2G6Q5TZ20 316 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 LAIR2Q6ISS4 152 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 ZNF562Q6V9R5 426 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 LYG2Q86SG7 212 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 GID4Q8IVV7 300 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 SERPINA12Q8IW75 414 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 AQP12AQ8IXF9 295 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 TMEM61Q8N0U2 210 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 ZFP41Q8N8Y5 198 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 POC5Q8NA72 575 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 ADAD2Q8NCV1 583 aaKnown RBP2.29□□□□□ -2.04
SLIRP-202ENST00000553981 CCDC54Q8NEL0 328 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 OR8H1Q8NGG4 311 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 OR52I1Q8NGK6 324 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 FLYWCH2Q96CP2 140 aaKnown RBP2.29□□□□□ -2.04
SLIRP-202ENST00000553981 NRBF2Q96F24 287 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 PGLYRP3Q96LB9 341 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 YPEL2Q96QA6 119 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 GFI1Q99684 422 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 SLC29A1Q99808 456 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 GON7Q9BXV9 100 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 GABARAPL3Q9BY60 117 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 FAM192AQ9GZU8 254 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 RANGRFQ9HD47 186 aaPredicted RBP2.29□□□□□ -2.04
SLIRP-202ENST00000553981 ZC4H2Q9NQZ6 224 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 KRT84Q9NSB2 600 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 SIGLEC8Q9NYZ4 499 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 IL36GQ9NZH8 169 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 METTL1Q9UBP6 276 aaKnown RBP2.29□□□□□ -2.04
SLIRP-202ENST00000553981 PEF1Q9UBV8 284 aaKnown RBP2.29□□□□□ -2.04
SLIRP-202ENST00000553981 UBQLN2Q9UHD9 624 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 CLEC2DQ9UHP7 191 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 GLS2Q9UI32 602 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 RNF150Q9ULK6 438 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 APLNQ9ULZ1 77 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 DHDHQ9UQ10 334 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 IGKV1D-8A0A087WSZ0 117 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 TRBV9A0A0B4J1U6 114 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 DAPL1A0PJW8 107 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 C2orf70A6NJV1 201 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 GNGT2O14610 69 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 DEFB4AO15263 64 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 OGG1O15527 345 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 SLC25A17O43808 307 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 WBP4O75554 376 aaKnown RBP2.28□□□□□ -2.04
SLIRP-202ENST00000553981 OR2C1O95371 312 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 NAPSAO96009 420 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 MAS1P04201 325 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 IFNA6P05013 189 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 GIG44P09565 113 aaPredicted RBP2.28□□□□□ -2.04
SLIRP-202ENST00000553981 SCTP09683 121 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 OR5H8P0DN80 308 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 CTRB1P17538 263 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 HTR2CP28335 458 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 ZNF93P35789 620 aaPredicted RBP2.28□□□□□ -2.04
SLIRP-202ENST00000553981 KCNJ3P48549 501 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 ETV1P50549 477 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 TMEM50BP56557 158 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 LINC01547P58512 204 aaPredicted RBP2.28□□□□□ -2.04
SLIRP-202ENST00000553981 ACTR3P61158 418 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 GNGT1P63211 74 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 QRFPP83859 136 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 HTD2P86397 168 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 UNC119Q13432 240 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 FXYD3Q14802 87 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 RSU1Q15404 277 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 ATP6AP1Q15904 470 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 MPV17LQ2QL34 196 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 DEFB135Q30KP9 77 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 SLC22A6Q4U2R8 563 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 LY6G6FQ5SQ64 297 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 SLC25A30Q5SVS4 291 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 DDI2Q5TDH0 399 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 LGALS9CQ6DKI2 356 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 CTRB2Q6GPI1 263 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 RAB12Q6IQ22 244 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 GLIPR1L1Q6UWM5 242 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 UNQ9165/PRO28630Q6UXU0 137 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 IDO2Q6ZQW0 420 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 C6orf201Q7Z4U5 140 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 SPATA24Q86W54 205 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 Q8N402 240 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 ZNF645Q8N7E2 425 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 GRPEL2Q8TAA5 225 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 PHLDA1Q8WV24 401 aaPredicted RBP2.28□□□□□ -2.04
SLIRP-202ENST00000553981 FAM46BQ96A09 425 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 MRPS24Q96EL2 167 aaKnown RBP2.28□□□□□ -2.04
SLIRP-202ENST00000553981 ZNF184Q99676 751 aaPredicted RBP2.28□□□□□ -2.04
SLIRP-202ENST00000553981 FAAP24Q9BTP7 215 aa2.28□□□□□ -2.04
SLIRP-202ENST00000553981 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms