RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 CRABP1P29762 137 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 S100A7P31151 101 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 GLRXP35754 106 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 GABRA4P48169 554 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 SERPINB10P48595 397 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 AKR1C2P52895 323 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 TAS2R45P59539 299 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 LCN6P62502 163 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 RPL30P62888 115 aaKnown RBP1.43□□□□□ -2.18
SRP54-204ENST00000553923 HBA1P69905 142 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 HOXC5Q00444 222 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 MMDQ15546 238 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 PLPPR5Q32ZL2 321 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 LGALSLQ3ZCW2 172 aaPredicted RBP1.43□□□□□ -2.18
SRP54-204ENST00000553923 SMARCD3Q6STE5 483 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 AMTNQ6UX39 209 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 ZFP2Q6ZN57 461 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 Q6ZR03 302 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 SCXQ7RTU7 201 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 SLC22A24Q8N4F4 322 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 TMEM105Q8N8V8 129 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 DAND5Q8N907 189 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 ZFP62Q8NB50 900 aaPredicted RBP1.43□□□□□ -2.18
SRP54-204ENST00000553923 TMEM35BQ8NCS4 154 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 ST6GALNAC3Q8NDV1 305 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 OR11H6Q8NGC7 330 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 OR10A6Q8NH74 314 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 SKA2Q8WVK7 121 aaPredicted RBP1.43□□□□□ -2.18
SRP54-204ENST00000553923 MBD3L1Q8WWY6 194 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 MGLLQ99685 303 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 RNF5Q99942 180 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 MAP1LC3BQ9GZQ8 125 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 WDR61Q9GZS3 305 aaKnown RBP1.43□□□□□ -2.18
SRP54-204ENST00000553923 TMEM222Q9H0R3 208 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 MIXL1Q9H2W2 232 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 C11orf68Q9H3H3 251 aaKnown RBP1.43□□□□□ -2.18
SRP54-204ENST00000553923 FAM60AQ9NP50 221 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 ZNF586Q9NXT0 402 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 SLC23A2Q9UGH3 650 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 SMPXQ9UHP9 88 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 AK3Q9UIJ7 227 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 RPUSD1Q9UJJ7 312 aaKnown RBP1.43□□□□□ -2.18
SRP54-204ENST00000553923 PRNDQ9UKY0 176 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 HSPB11Q9Y547 144 aa1.43□□□□□ -2.18
SRP54-204ENST00000553923 IGSF9BQ9UPX0 1349 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 NCOA1Q15788 1441 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 TRAV9-1A0A075B6T8 112 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 PINLYPA6NC86 204 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 DPRXA6NFQ7 191 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 A8MUN3 132 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 A8MWP4 228 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 H3BMM0 161 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 PLA2G10O15496 165 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 MED6O75586 246 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 WISP3O95389 354 aaPredicted RBP1.42□□□□□ -2.18
SRP54-204ENST00000553923 FSTL3O95633 263 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 DHFRP00374 187 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 RBP1P09455 135 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 CYBAP13498 195 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 PPIBP23284 216 aaKnown RBP1.42□□□□□ -2.18
SRP54-204ENST00000553923 PSMD8P48556 350 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 EMP1P54849 157 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 RWDD2BP57060 319 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 TNFAIP6P98066 277 aaPredicted RBP1.42□□□□□ -2.18
SRP54-204ENST00000553923 BAMBIQ13145 260 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 C12orf74Q32Q52 190 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 TMEM128Q5BJH2 165 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 TNFAIP8L3Q5GJ75 292 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 SAMD13Q5VXD3 122 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 FAM104BQ5XKR9 115 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 WDR59Q6PJI9 974 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 ZNF767PQ75MW2 155 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 ADM2Q7Z4H4 148 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 CROCCP2Q86T23 111 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 OR13C8Q8NGS7 320 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 OR10J5Q8NHC4 309 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 SGMS2Q8NHU3 365 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 RPS4Y2Q8TD47 263 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 GPR119Q8TDV5 335 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 UBE2WQ96B02 151 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 GPR146Q96CH1 333 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 IP6K3Q96PC2 410 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 ERMAPQ96PL5 475 aaPredicted RBP1.42□□□□□ -2.18
SRP54-204ENST00000553923 TSPAN32Q96QS1 320 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 TMEM70Q9BUB7 260 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 C1orf50Q9BV19 199 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 RSPO3Q9BXY4 272 aaPredicted RBP1.42□□□□□ -2.18
SRP54-204ENST00000553923 OR2D2Q9H210 308 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 VCXQ9H320 206 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 LINC00574Q9H8X3 128 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 LYRM2Q9NU23 88 aaPredicted RBP1.42□□□□□ -2.18
SRP54-204ENST00000553923 FBXL12Q9NXK8 326 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 TAS2R7Q9NYW3 318 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 SNX12Q9UMY4 172 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 GINS2Q9Y248 185 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 CYSLTR1Q9Y271 337 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 TMEM56-RWDD3S4R434 201 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 RTL1A6NKG5 1358 aa1.42□□□□□ -2.18
SRP54-204ENST00000553923 DCCP43146 1447 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 CRB1P82279 1406 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms