RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 MMP9P14780 707 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 MC5RP33032 325 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 RAB13P51153 203 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 AKR1C2P52895 323 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 LGALS4P56470 323 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 H2BFSP57053 126 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 ERVK-16P61578 105 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 ZFP69Q49AA0 526 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 ZNF585BQ52M93 769 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 OR2B11Q5JQS5 317 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 MINOS1Q5TGZ0 78 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 FAM219AQ8IW50 185 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 LHFPL5Q8TAF8 219 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 DDB2Q92466 427 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 LSM10Q969L4 123 aaKnown RBP11.68□□□□□ -0.54
SHMT2-208ENST00000553868 RPEQ96AT9 228 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 FYTTD1Q96QD9 318 aaKnown RBP11.68□□□□□ -0.54
SHMT2-208ENST00000553868 NMES1Q9C002 83 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 SLC35D1Q9NTN3 355 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 ZFP57Q9NU63 452 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 ZNRD1Q9P1U0 126 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 DPM3Q9P2X0 92 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 MINOS1-NBL1R4GNA1 71 aa11.68□□□□□ -0.54
SHMT2-208ENST00000553868 DOCK11Q5JSL3 2073 aa11.67□□□□□ -0.54
SHMT2-208ENST00000553868 ODF3BA8MYP8 253 aa11.67□□□□□ -0.54
SHMT2-208ENST00000553868 OOSP1A8MZH6 123 aa11.67□□□□□ -0.54
SHMT2-208ENST00000553868 CT45A6P0DMU7 189 aa11.67□□□□□ -0.54
SHMT2-208ENST00000553868 CT45A5P0DMU8 189 aa11.67□□□□□ -0.54
SHMT2-208ENST00000553868 CT45A7P0DMV0 189 aa11.67□□□□□ -0.54
SHMT2-208ENST00000553868 SLC25A6P12236 298 aa11.67□□□□□ -0.54
SHMT2-208ENST00000553868 UBE2E1P51965 193 aa11.67□□□□□ -0.54
SHMT2-208ENST00000553868 ZNF816Q0VGE8 651 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-208ENST00000553868 IAH1Q2TAA2 248 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-208ENST00000553868 CCDC144NLQ6NUI1 221 aa11.67□□□□□ -0.54
SHMT2-208ENST00000553868 ZNF383Q8NA42 475 aa11.67□□□□□ -0.54
SHMT2-208ENST00000553868 OR4P4Q8NGL7 312 aa11.67□□□□□ -0.54
SHMT2-208ENST00000553868 OR2T35Q8NGX2 323 aa11.67□□□□□ -0.54
SHMT2-208ENST00000553868 TBX15Q96SF7 602 aa11.67□□□□□ -0.54
SHMT2-208ENST00000553868 MRPL20Q9BYC9 149 aaKnown RBP11.67□□□□□ -0.54
SHMT2-208ENST00000553868 RANBP3Q9H6Z4 567 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-208ENST00000553868 TBL2Q9Y4P3 447 aaKnown RBP11.67□□□□□ -0.54
SHMT2-208ENST00000553868 AUP1Q9Y679 476 aa11.67□□□□□ -0.54
SHMT2-208ENST00000553868 A0A1B0GU03 582 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 J3QLI3 93 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 HRASP01112 189 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 C1QBP02746 253 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 PET100P0DJ07 73 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 ARHGDIBP52566 201 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 KLRD1Q13241 179 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 TPTE2P1Q5T6R2 138 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 HCP5Q6MZN7 132 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 PDPNQ86YL7 162 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 OR8H3Q8N146 312 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 OR5AN1Q8NGI8 311 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 LHX4Q969G2 390 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 SEC22AQ96IW7 307 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 NABP2Q9BQ15 211 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 WASHC3Q9Y3C0 194 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 MMP24Q9Y5R2 645 aa11.66□□□□□ -0.54
SHMT2-208ENST00000553868 RNASEK-C17orf49H0YIS7 233 aa11.65□□□□□ -0.54
SHMT2-208ENST00000553868 H7C2Y5 167 aa11.65□□□□□ -0.54
SHMT2-208ENST00000553868 RAMP3O60896 148 aa11.65□□□□□ -0.54
SHMT2-208ENST00000553868 S1PR2O95136 353 aa11.65□□□□□ -0.54
SHMT2-208ENST00000553868 NQO2P16083 231 aa11.65□□□□□ -0.54
SHMT2-208ENST00000553868 REG1BP48304 166 aa11.65□□□□□ -0.54
SHMT2-208ENST00000553868 DLX1P56177 255 aa11.65□□□□□ -0.54
SHMT2-208ENST00000553868 CD300CQ08708 224 aa11.65□□□□□ -0.54
SHMT2-208ENST00000553868 NMSQ5H8A3 153 aa11.65□□□□□ -0.54
SHMT2-208ENST00000553868 ZBTB8BQ8NAP8 495 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-208ENST00000553868 R3HDM4Q96D70 268 aa11.65□□□□□ -0.54
SHMT2-208ENST00000553868 GSKIPQ9P0R6 139 aa11.65□□□□□ -0.54
SHMT2-208ENST00000553868 H0YJW9 148 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 LY6LH3BQJ8 138 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 SNAPC5O75971 98 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 CRYZL1O95825 349 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 KRASP01116 189 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 IGKV1-39P01597 117 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 PRB2P02812 416 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-208ENST00000553868 IGKV1D-39P04432 117 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 BRWD1-AS2P59051 145 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 PRB3Q04118 309 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-208ENST00000553868 SMCO1Q147U7 214 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 H2BFWTQ7Z2G1 175 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 MOB3BQ86TA1 216 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 DMBX1Q8NFW5 382 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 OR4C13Q8NGP0 309 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 OSR1Q8TAX0 266 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-208ENST00000553868 OR10C1Q96KK4 312 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 HYLS1Q96M11 299 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 C7orf69Q9H7B7 122 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 CACFD1Q9UGQ2 172 aa11.64□□□□□ -0.55
SHMT2-208ENST00000553868 WNK2Q9Y3S1 2297 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 IGHV1-3A0A0C4DH29 117 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 MARCH11A6NNE9 402 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 FAM90A9PA6NNJ1 464 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 MPTX1A8MV57 137 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 BOLA2-SMG1P6H3BVE0 249 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 IGKV1-5P01602 117 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 RLN2P04090 185 aa11.63□□□□□ -0.55
SHMT2-208ENST00000553868 MDKP21741 143 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms