RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ACTBL2Q562R1 376 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 ZNF660Q6AZW8 331 aaPredicted RBP6.58□□□□□ -1.36
PSEN1-209ENST00000553855 LPCAT3Q6P1A2 487 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 ZNF66Q6ZN08 573 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 ZNF383Q8NA42 475 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 OR6F1Q8NGZ6 308 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 OSR1Q8TAX0 266 aaPredicted RBP6.58□□□□□ -1.36
PSEN1-209ENST00000553855 GIMAP1Q8WWP7 306 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 CLCC1Q96S66 551 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 C6orf62Q9GZU0 229 aaPredicted RBP6.58□□□□□ -1.36
PSEN1-209ENST00000553855 SLC5A7Q9GZV3 580 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 OR51J1Q9H342 316 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 PLSCR3Q9NRY6 295 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 CCDC59Q9P031 241 aaKnown RBP6.58□□□□□ -1.36
PSEN1-209ENST00000553855 LINC00527Q9UJ94 153 aa6.58□□□□□ -1.36
PSEN1-209ENST00000553855 RBMX2Q9Y388 322 aaKnown RBP6.58□□□□□ -1.36
PSEN1-209ENST00000553855 TRAV41A0A0B4J266 112 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 SLC25A17O43808 307 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 FCGR3BO75015 233 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 CRYZL1O95825 349 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 PMP2P02689 132 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 IGF1P05019 195 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 AADACP22760 399 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 CNTFRP26992 372 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 HLA-DMAP28067 261 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 GNB1P62873 340 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 IL18Q14116 193 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 SPCS2Q15005 226 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 MSMO1Q15800 293 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 CMTM1Q8IZ96 169 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 TCTEX1D1Q8N7M0 179 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 OR4S2Q8NH73 311 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 VSTM2AQ8TAG5 236 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 FCAMRQ8WWV6 532 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 ISOC1Q96CN7 298 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 DIRAS2Q96HU8 199 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 PHB2Q99623 299 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 ZNF2Q9BSG1 426 aaPredicted RBP6.57□□□□□ -1.36
PSEN1-209ENST00000553855 ZNF580Q9UK33 172 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 A3GALT2U3KPV4 340 aa6.57□□□□□ -1.36
PSEN1-209ENST00000553855 IGHV7-81A0A0B4J1V7 117 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 H3BMQ9 156 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 ATP6V0E1O15342 81 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 MPPED1O15442 326 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 PROP1O75360 226 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 TSPAN15O95858 294 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 CA2P00918 260 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 HRASP01112 189 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 PLA2G1BP04054 148 aaKnown RBP6.56□□□□□ -1.36
PSEN1-209ENST00000553855 IGKV1-16P04430 117 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 S100A5P33763 92 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 RFX2P48378 723 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 CX3CL1P78423 397 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 FOXE3Q13461 319 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 DYRK1AQ13627 763 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 ECSCRQ19T08 205 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 RNASE12Q5GAN4 147 aaKnown RBP6.56□□□□□ -1.36
PSEN1-209ENST00000553855 RNASE10Q5GAN6 216 aaKnown RBP6.56□□□□□ -1.36
PSEN1-209ENST00000553855 AADACL3Q5VUY0 350 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 PYHIN1Q6K0P9 492 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 UNQ5815/PRO19632Q6UWF5 114 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 ZNF562Q6V9R5 426 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 PPP1R27Q86WC6 154 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 TEX45Q8NA69 505 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 MCFD2Q8NI22 146 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 CD300LFQ8TDQ1 290 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 GPX8Q8TED1 209 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 SNAPC3Q92966 411 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 RITA1Q96K30 269 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 HSPB9Q9BQS6 159 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 CCL28Q9NRJ3 127 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 TAS2R8Q9NYW2 309 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 RSL24D1Q9UHA3 163 aaKnown RBP6.56□□□□□ -1.36
PSEN1-209ENST00000553855 WSB1Q9Y6I7 421 aa6.56□□□□□ -1.36
PSEN1-209ENST00000553855 IGKV1D-13A0A0B4J2D9 117 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 A0A1W2PN81 502 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 LINC01548A6NM66 108 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 TNFSF12O43508 249 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 IGHG4P01861 327 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 IGKV1-13P0DP09 117 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 TBPP20226 339 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 HRH1P35367 487 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 CHRNA7P36544 502 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 LINC00205P59089 165 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 UBE2KP61086 200 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 ERVK-16P61578 105 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 RPL23AP62750 156 aaKnown RBP6.55□□□□□ -1.36
PSEN1-209ENST00000553855 FXYD3Q14802 87 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 TNXAQ16473 311 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 GAGE13Q4V321 117 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 OR2B11Q5JQS5 317 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 DHRS11Q6UWP2 260 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 ZNF695Q8IW36 515 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 MMD2Q8IY49 270 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 KLHL30-AS1Q8NEE0 82 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 GRPEL2Q8TAA5 225 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 DYNC2LI1Q8TCX1 351 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 WIPF2Q8TF74 440 aaPredicted RBP6.55□□□□□ -1.36
PSEN1-209ENST00000553855 ARPC1AQ92747 370 aa6.55□□□□□ -1.36
PSEN1-209ENST00000553855 TRIM63Q969Q1 353 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms