RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 USMG5Q96IX5 58 aa13.65□□□□□ -0.22
FOXN3-204ENST00000553840 TINAGL1Q9GZM7 467 aaPredicted RBP13.65□□□□□ -0.22
FOXN3-204ENST00000553840 SORL1Q92673 2214 aa13.64□□□□□ -0.23
FOXN3-204ENST00000553840 AIREO43918 545 aa13.64□□□□□ -0.23
FOXN3-204ENST00000553840 LSM3P62310 102 aaKnown RBP13.64□□□□□ -0.23
FOXN3-204ENST00000553840 IDO2Q6ZQW0 420 aa13.64□□□□□ -0.23
FOXN3-204ENST00000553840 OVCH2Q7RTZ1 564 aa13.64□□□□□ -0.23
FOXN3-204ENST00000553840 OR4S2Q8NH73 311 aa13.64□□□□□ -0.23
FOXN3-204ENST00000553840 VSTM2AQ8TAG5 236 aa13.64□□□□□ -0.23
FOXN3-204ENST00000553840 SRSF12Q8WXF0 261 aaKnown RBP13.64□□□□□ -0.23
FOXN3-204ENST00000553840 SLC25A38Q96DW6 304 aa13.64□□□□□ -0.23
FOXN3-204ENST00000553840 SPIN2AQ99865 258 aa13.64□□□□□ -0.23
FOXN3-204ENST00000553840 SPIN2BQ9BPZ2 258 aa13.64□□□□□ -0.23
FOXN3-204ENST00000553840 SPATA2Q9UM82 520 aa13.64□□□□□ -0.23
FOXN3-204ENST00000553840 SMAD5-AS1Q9Y6J3 95 aa13.64□□□□□ -0.23
FOXN3-204ENST00000553840 OR9G9P0C7N8 305 aa13.63□□□□□ -0.23
FOXN3-204ENST00000553840 SAA1P0DJI8 122 aaPredicted RBP13.63□□□□□ -0.23
FOXN3-204ENST00000553840 APELAP0DMC3 54 aa13.63□□□□□ -0.23
FOXN3-204ENST00000553840 ZNF66Q6ZN08 573 aa13.63□□□□□ -0.23
FOXN3-204ENST00000553840 TCTEX1D2Q8WW35 142 aa13.63□□□□□ -0.23
FOXN3-204ENST00000553840 S100A16Q96FQ6 103 aaKnown RBP13.63□□□□□ -0.23
FOXN3-204ENST00000553840 IGKV1D-13A0A0B4J2D9 117 aa13.62□□□□□ -0.23
FOXN3-204ENST00000553840 ANKRD34BA5PLL1 514 aa13.62□□□□□ -0.23
FOXN3-204ENST00000553840 IGKV1-13P0DP09 117 aa13.62□□□□□ -0.23
FOXN3-204ENST00000553840 FCGR2CP31995 323 aa13.62□□□□□ -0.23
FOXN3-204ENST00000553840 CBX5P45973 191 aa13.62□□□□□ -0.23
FOXN3-204ENST00000553840 TATDN3Q17R31 274 aa13.62□□□□□ -0.23
FOXN3-204ENST00000553840 OR2B11Q5JQS5 317 aa13.62□□□□□ -0.23
FOXN3-204ENST00000553840 HOGA1Q86XE5 327 aa13.62□□□□□ -0.23
FOXN3-204ENST00000553840 ANKRD13BQ86YJ7 626 aa13.62□□□□□ -0.23
FOXN3-204ENST00000553840 OR13F1Q8NGS4 319 aa13.62□□□□□ -0.23
FOXN3-204ENST00000553840 WWC2-AS2Q96NR7 200 aa13.62□□□□□ -0.23
FOXN3-204ENST00000553840 FUNDC2Q9BWH2 189 aa13.62□□□□□ -0.23
FOXN3-204ENST00000553840 AUNIPQ9H7T9 357 aa13.62□□□□□ -0.23
FOXN3-204ENST00000553840 ZNF430Q9H8G1 570 aaPredicted RBP13.62□□□□□ -0.23
FOXN3-204ENST00000553840 TAS2R8Q9NYW2 309 aa13.62□□□□□ -0.23
FOXN3-204ENST00000553840 PEF1Q9UBV8 284 aaKnown RBP13.62□□□□□ -0.23
FOXN3-204ENST00000553840 HRASP01112 189 aa13.61□□□□□ -0.23
FOXN3-204ENST00000553840 IGLV2-14P01704 120 aa13.61□□□□□ -0.23
FOXN3-204ENST00000553840 GP9P14770 177 aa13.61□□□□□ -0.23
FOXN3-204ENST00000553840 SPNP16150 400 aa13.61□□□□□ -0.23
FOXN3-204ENST00000553840 TGFBR1P36897 503 aa13.61□□□□□ -0.23
FOXN3-204ENST00000553840 KIR2DS2P43631 304 aa13.61□□□□□ -0.23
FOXN3-204ENST00000553840 RPL30P62888 115 aaKnown RBP13.61□□□□□ -0.23
FOXN3-204ENST00000553840 MRGPRG-AS1Q2M3A8 158 aa13.61□□□□□ -0.23
FOXN3-204ENST00000553840 SLC25A42Q86VD7 318 aa13.61□□□□□ -0.23
FOXN3-204ENST00000553840 MFSD4AQ8N468 514 aa13.61□□□□□ -0.23
FOXN3-204ENST00000553840 GVQW1Q8N7I0 195 aa13.61□□□□□ -0.23
FOXN3-204ENST00000553840 ZBTB34Q8NCN2 500 aa13.61□□□□□ -0.23
FOXN3-204ENST00000553840 SECTM1Q8WVN6 248 aa13.61□□□□□ -0.23
FOXN3-204ENST00000553840 AIFM2Q9BRQ8 373 aa13.61□□□□□ -0.23
FOXN3-204ENST00000553840 RSRP1Q9BUV0 290 aa13.61□□□□□ -0.23
FOXN3-204ENST00000553840 U3KQK5 164 aa13.61□□□□□ -0.23
FOXN3-204ENST00000553840 COL7A1Q02388 2944 aa13.6□□□□□ -0.23
FOXN3-204ENST00000553840 FAM223BA6NKX1 122 aa13.6□□□□□ -0.23
FOXN3-204ENST00000553840 XRCC3O43542 346 aa13.6□□□□□ -0.23
FOXN3-204ENST00000553840 OR2A4O95047 310 aa13.6□□□□□ -0.23
FOXN3-204ENST00000553840 MSMO1Q15800 293 aa13.6□□□□□ -0.23
FOXN3-204ENST00000553840 UBE2NLQ5JXB2 153 aa13.6□□□□□ -0.23
FOXN3-204ENST00000553840 ZNF343Q6P1L6 599 aa13.6□□□□□ -0.23
FOXN3-204ENST00000553840 FAM223AQ8IWN6 122 aa13.6□□□□□ -0.23
FOXN3-204ENST00000553840 ADAD2Q8NCV1 583 aaKnown RBP13.6□□□□□ -0.23
FOXN3-204ENST00000553840 OR2A7Q96R45 310 aa13.6□□□□□ -0.23
FOXN3-204ENST00000553840 IFT46Q9NQC8 304 aa13.6□□□□□ -0.23
FOXN3-204ENST00000553840 TNCP24821 2201 aa13.6□□□□□ -0.23
FOXN3-204ENST00000553840 KBTBD11O94819 623 aa13.59□□□□□ -0.23
FOXN3-204ENST00000553840 PPYP01298 95 aa13.59□□□□□ -0.23
FOXN3-204ENST00000553840 MAS1LP35410 378 aa13.59□□□□□ -0.23
FOXN3-204ENST00000553840 ATP5G2Q06055 141 aa13.59□□□□□ -0.23
FOXN3-204ENST00000553840 CATR1Q13166 79 aa13.59□□□□□ -0.23
FOXN3-204ENST00000553840 KLF5Q13887 457 aaPredicted RBP13.59□□□□□ -0.23
FOXN3-204ENST00000553840 RPEL1Q2QD12 228 aa13.59□□□□□ -0.23
FOXN3-204ENST00000553840 GPR141Q7Z602 305 aa13.59□□□□□ -0.23
FOXN3-204ENST00000553840 OR5AP2Q8NGF4 316 aa13.59□□□□□ -0.23
FOXN3-204ENST00000553840 SNAPC3Q92966 411 aa13.59□□□□□ -0.23
FOXN3-204ENST00000553840 BORCS5Q969J3 196 aa13.59□□□□□ -0.23
FOXN3-204ENST00000553840 CCL28Q9NRJ3 127 aa13.59□□□□□ -0.23
FOXN3-204ENST00000553840 DPPA5A6NC42 116 aa13.58□□□□□ -0.24
FOXN3-204ENST00000553840 RPS19P39019 145 aaKnown RBP13.58□□□□□ -0.24
FOXN3-204ENST00000553840 ALDH3B2P48448 385 aa13.58□□□□□ -0.24
FOXN3-204ENST00000553840 RHOGP84095 191 aa13.58□□□□□ -0.24
FOXN3-204ENST00000553840 EIF4EBP1Q13541 118 aaPredicted RBP13.58□□□□□ -0.24
FOXN3-204ENST00000553840 DYRK1AQ13627 763 aa13.58□□□□□ -0.24
FOXN3-204ENST00000553840 FAM209BQ5JX69 171 aa13.58□□□□□ -0.24
FOXN3-204ENST00000553840 VKORC1L1Q8N0U8 176 aa13.58□□□□□ -0.24
FOXN3-204ENST00000553840 TTC9CQ8N5M4 171 aa13.58□□□□□ -0.24
FOXN3-204ENST00000553840 OR9G4Q8NGQ1 327 aa13.58□□□□□ -0.24
FOXN3-204ENST00000553840 TMEM167AQ8TBQ9 72 aa13.58□□□□□ -0.24
FOXN3-204ENST00000553840 SLC5A7Q9GZV3 580 aa13.58□□□□□ -0.24
FOXN3-204ENST00000553840 TNFSF12O43508 249 aa13.57□□□□□ -0.24
FOXN3-204ENST00000553840 IGLV1-51P01701 117 aa13.57□□□□□ -0.24
FOXN3-204ENST00000553840 FXYD4P59646 89 aa13.57□□□□□ -0.24
FOXN3-204ENST00000553840 HERV-K104P61576 105 aa13.57□□□□□ -0.24
FOXN3-204ENST00000553840 VBP1P61758 197 aa13.57□□□□□ -0.24
FOXN3-204ENST00000553840 NCS1P62166 190 aa13.57□□□□□ -0.24
FOXN3-204ENST00000553840 DEFA5Q01523 94 aa13.57□□□□□ -0.24
FOXN3-204ENST00000553840 TMEM69Q5SWH9 247 aa13.57□□□□□ -0.24
FOXN3-204ENST00000553840 GPR107Q5VW38 600 aa13.57□□□□□ -0.24
FOXN3-204ENST00000553840 PUSL1Q8N0Z8 303 aaKnown RBP13.57□□□□□ -0.24
FOXN3-204ENST00000553840 SAMD12Q8N8I0 201 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms