RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 REV3LO60673 3130 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 NAIPQ13075 1403 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 TICRRQ7Z2Z1 1910 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 TRAV30A0A087WSZ9 112 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 A0A087WUU8 490 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 ZNF816-ZNF321PA0A0X1KG74 233 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 A0A1B0GW55 424 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 MAP1LC3B2A6NCE7 125 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 CEACAM18A8MTB9 384 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 K7EM74 188 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 UPK1AO00322 258 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 MANBAO00462 879 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 MFNGO00587 321 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 PLPP1O14494 284 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 MRPS14O60783 128 aaKnown RBP1.43□□□□□ -2.18
VRK1-202ENST00000553683 RDH16O75452 317 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 REM1O75628 298 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 OR7C1O76099 320 aaPredicted RBP1.43□□□□□ -2.18
VRK1-202ENST00000553683 MPC2O95563 127 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 NRASP01111 189 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 CD8AP01732 235 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 CATP04040 527 aaKnown RBP1.43□□□□□ -2.18
VRK1-202ENST00000553683 CRYBA1P05813 215 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 PFN1P07737 140 aaKnown RBP1.43□□□□□ -2.18
VRK1-202ENST00000553683 UBBP0CG47 229 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 DUX4L2P0CJ85 424 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 DUX4L3P0CJ86 424 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 DUX4L5P0CJ88 424 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 DUX4L6P0CJ89 424 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 DUX4L7P0CJ90 424 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 FGF7P21781 194 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 RPL12P30050 165 aaKnown RBP1.43□□□□□ -2.18
VRK1-202ENST00000553683 GRPRP30550 384 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 OR1E2P47887 323 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 SYNJ2BPP57105 145 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 TCTAP57738 103 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 TPI1P60174 286 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 HIST1H3AP68431 136 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 H3F3AP84243 136 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 IFITM3Q01628 133 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 SLC25A11Q02978 314 aaKnown RBP1.43□□□□□ -2.18
VRK1-202ENST00000553683 CAV1Q03135 178 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 CD164Q04900 197 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 EBPQ15125 230 aaKnown RBP1.43□□□□□ -2.18
VRK1-202ENST00000553683 LTC4SQ16873 150 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 HLA-DRB5Q30154 266 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 KRTAP6-3Q3LI67 103 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 SCGB2B2Q4G0G5 96 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 MESTQ5EB52 335 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 TCEAL5Q5H9L2 206 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 AKR1C8PQ5T2L2 129 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 C1orf194Q5T5A4 169 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 TPTE2P1Q5T6R2 138 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 AGTRAPQ6RW13 159 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 Q6ZSR6 202 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 HIST2H3AQ71DI3 136 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 SLC35E3Q7Z769 313 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 NAA40Q86UY6 237 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 CMTM1Q8IZ96 169 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 TCTE3Q8IZS6 198 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 C8orf59Q8N0T1 100 aaPredicted RBP1.43□□□□□ -2.18
VRK1-202ENST00000553683 ZNF567Q8N184 647 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 MUC15Q8N387 334 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 CBR4Q8N4T8 237 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 DEFB123Q8N688 67 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 OR4E2Q8NGC2 313 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 OR9I1Q8NGQ6 314 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 OR5K2Q8NHB8 316 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 CANT1Q8WVQ1 401 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 LCN9Q8WX39 176 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 ASB13Q8WXK3 278 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 ROPN1LQ96C74 230 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 DDIT4LQ96D03 193 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 SLC35G5Q96KT7 338 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 TEX37Q96LM6 180 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 LINC00052Q96N35 136 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 RBP7Q96R05 134 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 HSD17B10Q99714 261 aaKnown RBP1.43□□□□□ -2.18
VRK1-202ENST00000553683 GABRG3Q99928 467 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 LXNQ9BS40 222 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 MAP1LC3BQ9GZQ8 125 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 OR51I1Q9H343 314 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 PRORYQ9H606 182 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 VSIRQ9H7M9 311 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 ACOT13Q9NPJ3 140 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 HRASLS2Q9NWW9 162 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 ZNF586Q9NXT0 402 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 MED11Q9P086 117 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 OPTCQ9UBM4 332 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 DUX4Q9UBX2 424 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 LSM7Q9UK45 103 aaKnown RBP1.43□□□□□ -2.18
VRK1-202ENST00000553683 RAB22AQ9UL26 194 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 TNFSF18Q9UNG2 199 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 ST3GAL6Q9Y274 331 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 FAM135AQ9P2D6 1515 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 CFAP46Q8IYW2 2715 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 CASP8AP2Q9UKL3 1982 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 CCDC141Q6ZP82 1450 aa1.43□□□□□ -2.18
VRK1-202ENST00000553683 SPEGQ15772 3267 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms