RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 TCTEX1D2Q8WW35 142 aa13.98□□□□□ -0.17
SHMT2-206ENST00000553529 PHB2Q99623 299 aa13.98□□□□□ -0.17
SHMT2-206ENST00000553529 NAA50Q9GZZ1 169 aaKnown RBP13.98□□□□□ -0.17
SHMT2-206ENST00000553529 HSPB1P04792 205 aaKnown RBP13.97□□□□□ -0.17
SHMT2-206ENST00000553529 EDN2P20800 178 aa13.97□□□□□ -0.17
SHMT2-206ENST00000553529 ACSM6Q6P461 480 aa13.97□□□□□ -0.17
SHMT2-206ENST00000553529 SSX9Q7RTT3 188 aa13.97□□□□□ -0.17
SHMT2-206ENST00000553529 ADAD2Q8NCV1 583 aaKnown RBP13.97□□□□□ -0.17
SHMT2-206ENST00000553529 OR13F1Q8NGS4 319 aa13.97□□□□□ -0.17
SHMT2-206ENST00000553529 S4R3C0 116 aa13.97□□□□□ -0.17
SHMT2-206ENST00000553529 TRIM64CA6NLI5 447 aa13.96□□□□□ -0.17
SHMT2-206ENST00000553529 EIF4EP06730 217 aaKnown RBP13.96□□□□□ -0.17
SHMT2-206ENST00000553529 ARPC4P59998 168 aa13.96□□□□□ -0.17
SHMT2-206ENST00000553529 VBP1P61758 197 aa13.96□□□□□ -0.17
SHMT2-206ENST00000553529 PITPNAQ00169 270 aa13.96□□□□□ -0.17
SHMT2-206ENST00000553529 ARL6IP1Q15041 203 aa13.96□□□□□ -0.17
SHMT2-206ENST00000553529 VMA21Q3ZAQ7 101 aa13.96□□□□□ -0.17
SHMT2-206ENST00000553529 VAX1Q5SQQ9 334 aa13.96□□□□□ -0.17
SHMT2-206ENST00000553529 PYHIN1Q6K0P9 492 aa13.96□□□□□ -0.17
SHMT2-206ENST00000553529 OVCH2Q7RTZ1 564 aa13.96□□□□□ -0.17
SHMT2-206ENST00000553529 MFSD4AQ8N468 514 aa13.96□□□□□ -0.17
SHMT2-206ENST00000553529 TEX45Q8NA69 505 aa13.96□□□□□ -0.17
SHMT2-206ENST00000553529 ADTRPQ96IZ2 230 aa13.96□□□□□ -0.17
SHMT2-206ENST00000553529 TINAGL1Q9GZM7 467 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-206ENST00000553529 SELENOKQ9Y6D0 94 aa13.96□□□□□ -0.17
SHMT2-206ENST00000553529 TNCP24821 2201 aa13.96□□□□□ -0.17
SHMT2-206ENST00000553529 PPYP01298 95 aa13.95□□□□□ -0.18
SHMT2-206ENST00000553529 CTXN2P0C2S0 81 aa13.95□□□□□ -0.18
SHMT2-206ENST00000553529 SMIM18P0DKX4 95 aa13.95□□□□□ -0.18
SHMT2-206ENST00000553529 RRASP10301 218 aa13.95□□□□□ -0.18
SHMT2-206ENST00000553529 RPA2P15927 270 aa13.95□□□□□ -0.18
SHMT2-206ENST00000553529 CBX3Q13185 183 aa13.95□□□□□ -0.18
SHMT2-206ENST00000553529 CDK10Q15131 360 aa13.95□□□□□ -0.18
SHMT2-206ENST00000553529 TMEM17Q86X19 198 aa13.95□□□□□ -0.18
SHMT2-206ENST00000553529 SAMD12Q8N8I0 201 aa13.95□□□□□ -0.18
SHMT2-206ENST00000553529 FUNDC2Q9BWH2 189 aa13.95□□□□□ -0.18
SHMT2-206ENST00000553529 SLA2Q9H6Q3 261 aa13.95□□□□□ -0.18
SHMT2-206ENST00000553529 A0A087WXM4 84 aa13.94□□□□□ -0.18
SHMT2-206ENST00000553529 TRAV3A0A0B4J244 114 aa13.94□□□□□ -0.18
SHMT2-206ENST00000553529 C13orf42A0A1B0GVH6 325 aa13.94□□□□□ -0.18
SHMT2-206ENST00000553529 CGB1A6NKQ9 187 aa13.94□□□□□ -0.18
SHMT2-206ENST00000553529 TEX22C9J3V5 150 aa13.94□□□□□ -0.18
SHMT2-206ENST00000553529 SULT1C2O00338 296 aa13.94□□□□□ -0.18
SHMT2-206ENST00000553529 SCGNO76038 276 aa13.94□□□□□ -0.18
SHMT2-206ENST00000553529 IGHV3-23P01764 117 aa13.94□□□□□ -0.18
SHMT2-206ENST00000553529 IL6RP08887 468 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-206ENST00000553529 TAS2R20P59543 309 aa13.94□□□□□ -0.18
SHMT2-206ENST00000553529 IL34Q6ZMJ4 242 aa13.94□□□□□ -0.18
SHMT2-206ENST00000553529 ZNF818PQ6ZRF7 136 aa13.94□□□□□ -0.18
SHMT2-206ENST00000553529 OSR1Q8TAX0 266 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-206ENST00000553529 RSRP1Q9BUV0 290 aa13.94□□□□□ -0.18
SHMT2-206ENST00000553529 AKIP1Q9NQ31 210 aa13.94□□□□□ -0.18
SHMT2-206ENST00000553529 TNFAIP8O95379 198 aa13.93□□□□□ -0.18
SHMT2-206ENST00000553529 PMP2P02689 132 aa13.93□□□□□ -0.18
SHMT2-206ENST00000553529 REG1AP05451 166 aa13.93□□□□□ -0.18
SHMT2-206ENST00000553529 AREGP15514 252 aa13.93□□□□□ -0.18
SHMT2-206ENST00000553529 RFX2P48378 723 aa13.93□□□□□ -0.18
SHMT2-206ENST00000553529 SCAND1P57086 179 aa13.93□□□□□ -0.18
SHMT2-206ENST00000553529 SYNJ2BPP57105 145 aa13.93□□□□□ -0.18
SHMT2-206ENST00000553529 UBE2NLQ5JXB2 153 aa13.93□□□□□ -0.18
SHMT2-206ENST00000553529 PUSL1Q8N0Z8 303 aaKnown RBP13.93□□□□□ -0.18
SHMT2-206ENST00000553529 SLC5A7Q9GZV3 580 aa13.93□□□□□ -0.18
SHMT2-206ENST00000553529 DIABLOQ9NR28 239 aa13.93□□□□□ -0.18
SHMT2-206ENST00000553529 MPPED1O15442 326 aa13.92□□□□□ -0.18
SHMT2-206ENST00000553529 XRCC3O43542 346 aa13.92□□□□□ -0.18
SHMT2-206ENST00000553529 OR2J3O76001 311 aa13.92□□□□□ -0.18
SHMT2-206ENST00000553529 KBTBD11O94819 623 aa13.92□□□□□ -0.18
SHMT2-206ENST00000553529 OR9G9P0C7N8 305 aa13.92□□□□□ -0.18
SHMT2-206ENST00000553529 GP9P14770 177 aa13.92□□□□□ -0.18
SHMT2-206ENST00000553529 RHOGP84095 191 aa13.92□□□□□ -0.18
SHMT2-206ENST00000553529 RNASE12Q5GAN4 147 aaKnown RBP13.92□□□□□ -0.18
SHMT2-206ENST00000553529 ZNF429Q86V71 674 aa13.92□□□□□ -0.18
SHMT2-206ENST00000553529 OR51H1Q8NH63 302 aa13.92□□□□□ -0.18
SHMT2-206ENST00000553529 FYTTD1Q96QD9 318 aaKnown RBP13.92□□□□□ -0.18
SHMT2-206ENST00000553529 PPP5D1E7EU14 171 aa13.91□□□□□ -0.18
SHMT2-206ENST00000553529 H3BUA1 57 aa13.91□□□□□ -0.18
SHMT2-206ENST00000553529 HLA-AP01891 365 aaKnown RBP13.91□□□□□ -0.18
SHMT2-206ENST00000553529 CD40LGP29965 261 aa13.91□□□□□ -0.18
SHMT2-206ENST00000553529 TMEM69Q5SWH9 247 aa13.91□□□□□ -0.18
SHMT2-206ENST00000553529 ZNF343Q6P1L6 599 aa13.91□□□□□ -0.18
SHMT2-206ENST00000553529 SBSPONQ8IVN8 264 aa13.91□□□□□ -0.18
SHMT2-206ENST00000553529 OR4S2Q8NH73 311 aa13.91□□□□□ -0.18
SHMT2-206ENST00000553529 SLC25A46Q96AG3 418 aa13.91□□□□□ -0.18
SHMT2-206ENST00000553529 FXYD6Q9H0Q3 95 aa13.91□□□□□ -0.18
SHMT2-206ENST00000553529 EHFQ9NZC4 300 aa13.91□□□□□ -0.18
SHMT2-206ENST00000553529 COMMD3Q9UBI1 195 aa13.91□□□□□ -0.18
SHMT2-206ENST00000553529 PRELID3BQ9Y3B1 194 aa13.91□□□□□ -0.18
SHMT2-206ENST00000553529 IZUMO1RA6ND01 250 aa13.9□□□□□ -0.18
SHMT2-206ENST00000553529 BMPR1BO00238 502 aa13.9□□□□□ -0.18
SHMT2-206ENST00000553529 EXOSC2Q13868 293 aaKnown RBP13.9□□□□□ -0.18
SHMT2-206ENST00000553529 KLF5Q13887 457 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-206ENST00000553529 TIMM50Q3ZCQ8 353 aa13.9□□□□□ -0.18
SHMT2-206ENST00000553529 OR4A47Q6IF82 309 aa13.9□□□□□ -0.18
SHMT2-206ENST00000553529 SPAG16Q8N0X2 631 aa13.9□□□□□ -0.18
SHMT2-206ENST00000553529 OR5AP2Q8NGF4 316 aa13.9□□□□□ -0.18
SHMT2-206ENST00000553529 HSD17B10Q99714 261 aaKnown RBP13.9□□□□□ -0.18
SHMT2-206ENST00000553529 RANGRFQ9HD47 186 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-206ENST00000553529 IFT46Q9NQC8 304 aa13.9□□□□□ -0.18
SHMT2-206ENST00000553529 PEF1Q9UBV8 284 aaKnown RBP13.9□□□□□ -0.18
SHMT2-206ENST00000553529 ANAPC10Q9UM13 185 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms