RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 NQO2P16083 231 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 LOXL3P58215 753 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 EDDM3AQ14507 147 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 TPRX1Q8N7U7 411 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 OR10G9Q8NGN4 311 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 OR10G7Q8NGN6 311 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 RFESDQ8TAC1 157 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 RAB1CQ92928 201 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 NPCDR1Q9BY65 106 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 FAM234AQ9H0X4 552 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 PPP1R14DQ9NXH3 145 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 IL19Q9UHD0 177 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 NAT8Q9UHE5 227 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 FAM215AQ9Y5M1 114 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 PRRC2CQ9Y520 2896 aaKnown RBP10.71□□□□□ -0.69
SHMT2-205ENST00000553474 PRR14LQ5THK1 2151 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 DOCK11Q5JSL3 2073 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 DSCAML1Q8TD84 2053 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 IGHV3-43A0A0B4J1X8 118 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 M0R1B8 84 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 OPN1MWP04001 364 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 FBP1P09467 338 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 OPN1MW2P0DN77 364 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 OPN1MW3P0DN78 364 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 IGHV3-43DP0DP04 118 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 EGR1P18146 543 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 CEACAM8P31997 349 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-205ENST00000553474 RPS10P46783 165 aaKnown RBP10.71□□□□□ -0.69
SHMT2-205ENST00000553474 ZNF83P51522 516 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 ELLP55199 621 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-205ENST00000553474 FABP9Q0Z7S8 132 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 ACOT6Q3I5F7 207 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-205ENST00000553474 ZNF474Q6S9Z5 364 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-205ENST00000553474 CYP2G1PQ6ZSU1 146 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 C1orf87Q8N0U7 546 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 ADTRPQ96IZ2 230 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 WDR83OSQ9Y284 106 aa10.71□□□□□ -0.69
SHMT2-205ENST00000553474 ZFYVE26Q68DK2 2539 aa10.71□□□□□ -0.7
SHMT2-205ENST00000553474 IGSF10Q6WRI0 2623 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 TRGV8A0A0C4DH27 118 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 SMCO3A2RU48 225 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 CGB3P0DN86 165 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 CGB7P0DN87 165 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 TNFSF4P23510 183 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 OR2B8PP59922 312 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 PRAMEF5Q5TYX0 476 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 WDR25Q64LD2 544 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-205ENST00000553474 NCR3LG1Q68D85 454 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 ACSM6Q6P461 480 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 SSX7Q7RTT5 188 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 OR4A16Q8NH70 328 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 OR4S2Q8NH73 311 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 Q8WTZ3 238 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 SDSLQ96GA7 329 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 S1PR3Q99500 378 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 TXNDC17Q9BRA2 123 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 KCNIP2Q9NS61 270 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 RNF7Q9UBF6 113 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 TANC2Q9HCD6 1990 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 TRBV24-1A0A075B6N3 115 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 C15orf62A8K5M9 175 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 ZNF727A8MUV8 499 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 DEFB108AA8MXU0 73 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 SEC14L6B5MCN3 397 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 FCGR3BO75015 233 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 PROP1O75360 226 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 IGKV1D-33P01593 117 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 IGKV1-33P01594 117 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 CD1BP29016 333 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 FGF8P55075 233 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-205ENST00000553474 FFAR4Q5NUL3 377 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 Q8TCH9 128 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 ZDHHC16Q969W1 377 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 IFI27L2Q9H2X8 130 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 LINC00574Q9H8X3 128 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 CALYQ9NYX4 217 aa10.7□□□□□ -0.7
SHMT2-205ENST00000553474 KBTBD11-OT1A0A1B0GTJ5 212 aa10.69□□□□□ -0.7
SHMT2-205ENST00000553474 M0R1X1 148 aa10.69□□□□□ -0.7
SHMT2-205ENST00000553474 KBTBD11O94819 623 aa10.69□□□□□ -0.7
SHMT2-205ENST00000553474 VENTXO95231 258 aa10.69□□□□□ -0.7
SHMT2-205ENST00000553474 ERVFRD-1P60508 538 aa10.69□□□□□ -0.7
SHMT2-205ENST00000553474 MSMPQ1L6U9 139 aa10.69□□□□□ -0.7
SHMT2-205ENST00000553474 TMEM241Q24JQ0 296 aa10.69□□□□□ -0.7
SHMT2-205ENST00000553474 MOGAT3Q86VF5 341 aa10.69□□□□□ -0.7
SHMT2-205ENST00000553474 LRP11Q86VZ4 500 aa10.69□□□□□ -0.7
SHMT2-205ENST00000553474 NUP37Q8NFH4 326 aa10.69□□□□□ -0.7
SHMT2-205ENST00000553474 FAM57AQ8TBR7 257 aa10.69□□□□□ -0.7
SHMT2-205ENST00000553474 DDB2Q92466 427 aa10.69□□□□□ -0.7
SHMT2-205ENST00000553474 QTRT1Q9BXR0 403 aaKnown RBP10.69□□□□□ -0.7
SHMT2-205ENST00000553474 TMPRSS5Q9H3S3 457 aa10.69□□□□□ -0.7
SHMT2-205ENST00000553474 GFOD1Q9NXC2 390 aa10.69□□□□□ -0.7
SHMT2-205ENST00000553474 TRGV10A0A0A0MS01 117 aa10.68□□□□□ -0.7
SHMT2-205ENST00000553474 CD55P08174 381 aa10.68□□□□□ -0.7
SHMT2-205ENST00000553474 THBS3P49746 956 aa10.68□□□□□ -0.7
SHMT2-205ENST00000553474 EDDM3BP56851 147 aa10.68□□□□□ -0.7
SHMT2-205ENST00000553474 CD81P60033 236 aa10.68□□□□□ -0.7
SHMT2-205ENST00000553474 KLRB1Q12918 225 aa10.68□□□□□ -0.7
SHMT2-205ENST00000553474 KIAA0141Q14154 515 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-205ENST00000553474 FAM53AQ6NSI3 398 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-205ENST00000553474 ITLN1Q8WWA0 313 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms