RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 IGHV3-43A0A0B4J1X8 118 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 CDIPTO14735 213 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 SYNGR4O95473 234 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 HPRT1P00492 218 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 RPLP1P05386 114 aaKnown RBP10.37□□□□□ -0.75
HDAC7-230ENST00000552960 IGHV3-43DP0DP04 118 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 RNPS1Q15287 305 aaKnown RBP10.37□□□□□ -0.75
HDAC7-230ENST00000552960 MSMO1Q15800 293 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 COA6Q5JTJ3 125 aaKnown RBP10.37□□□□□ -0.75
HDAC7-230ENST00000552960 RFESDQ8TAC1 157 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 ATRXP46100 2492 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 PRR33A8MZF0 331 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 RPL30P62888 115 aaKnown RBP10.37□□□□□ -0.75
HDAC7-230ENST00000552960 COLCA1Q6ZS62 124 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 TPRX1Q8N7U7 411 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 FAM103A1Q9BTL3 118 aaKnown RBP10.37□□□□□ -0.75
HDAC7-230ENST00000552960 RYDENQ9NUL5 291 aaKnown RBP10.37□□□□□ -0.75
HDAC7-230ENST00000552960 MDFIC2A0A1B0GVS7 189 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 LRP5LA4QPB2 252 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 TM4SF5O14894 197 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 DNPH1O43598 174 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 GGCTO75223 188 aaKnown RBP10.37□□□□□ -0.75
HDAC7-230ENST00000552960 RAC2P15153 192 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 KITLGP21583 273 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 CBLN1P23435 193 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 GNB1P62873 340 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 SRSF7Q16629 238 aaKnown RBP eCLIP10.37□□□□□ -0.75
HDAC7-230ENST00000552960 RNFT1Q5M7Z0 435 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 TMEM14EPQ6UXP3 125 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 LINC01551Q86U37 167 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 SAXO1Q8IYX7 474 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 OR52L2PQ8NGH6 319 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 CMTM2Q8TAZ6 248 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 VN1R17PQ8TDU5 208 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 ASCL3Q9NQ33 180 aa10.37□□□□□ -0.75
HDAC7-230ENST00000552960 PIGBOS1A0A0B4J2F0 54 aa10.36□□□□□ -0.75
HDAC7-230ENST00000552960 COL8A2P25067 703 aa10.36□□□□□ -0.75
HDAC7-230ENST00000552960 ADMP35318 185 aa10.36□□□□□ -0.75
HDAC7-230ENST00000552960 SRP14P37108 136 aaKnown RBP10.36□□□□□ -0.75
HDAC7-230ENST00000552960 GFRA1P56159 465 aa10.36□□□□□ -0.75
HDAC7-230ENST00000552960 H2BFWTQ7Z2G1 175 aa10.36□□□□□ -0.75
HDAC7-230ENST00000552960 SAMD10Q9BYL1 202 aa10.36□□□□□ -0.75
HDAC7-230ENST00000552960 TTTY12Q9BZ98 90 aa10.36□□□□□ -0.75
HDAC7-230ENST00000552960 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.36□□□□□ -0.75
HDAC7-230ENST00000552960 PKDREJQ9NTG1 2253 aa10.36□□□□□ -0.75
HDAC7-230ENST00000552960 IGHV3-13P01766 116 aa10.36□□□□□ -0.75
HDAC7-230ENST00000552960 IGHV3-7P01780 117 aa10.36□□□□□ -0.75
HDAC7-230ENST00000552960 OR10J1P30954 320 aa10.36□□□□□ -0.75
HDAC7-230ENST00000552960 GNG10P50151 68 aa10.36□□□□□ -0.75
HDAC7-230ENST00000552960 LRFN3Q9BTN0 628 aa10.36□□□□□ -0.75
HDAC7-230ENST00000552960 ZNF703Q9H7S9 590 aaPredicted RBP10.36□□□□□ -0.75
HDAC7-230ENST00000552960 TUBG2Q9NRH3 451 aa10.36□□□□□ -0.75
HDAC7-230ENST00000552960 C17orf98A8MV24 154 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 F6UZH7 168 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 KALRNO60229 2985 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 ZNF90Q03938 601 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 BAGE3Q86Y29 109 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 BAGE2Q86Y30 109 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 TMEM251Q8N6I4 163 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 NINJ1Q92982 152 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 KCNIP1Q9NZI2 227 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 LRRC30A6NM36 301 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 SLC17A3O00476 420 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 RBFOX2O43251 390 aaKnown RBP eCLIP10.35□□□□□ -0.757e-7■■■■□ 24
HDAC7-230ENST00000552960 PDLIM4P50479 330 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 TNFSF10P50591 281 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 AKAP6Q13023 2319 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 C1orf194Q5T5A4 169 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 COL25A1Q9BXS0 654 aaPredicted RBP10.35□□□□□ -0.75
HDAC7-230ENST00000552960 ARG2P78540 354 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 AESQ08117 197 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 APH1AQ96BI3 265 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 WDYHV1Q96HA8 205 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 HSPB9Q9BQS6 159 aa10.35□□□□□ -0.75
HDAC7-230ENST00000552960 SIAH2O43255 324 aa10.34□□□□□ -0.75
HDAC7-230ENST00000552960 GABRA2P47869 451 aa10.34□□□□□ -0.75
HDAC7-230ENST00000552960 RNF212BA8MTL3 300 aa10.34□□□□□ -0.75
HDAC7-230ENST00000552960 C17orf112F2Z3M2 114 aa10.34□□□□□ -0.75
HDAC7-230ENST00000552960 MRGPRDQ8TDS7 321 aa10.34□□□□□ -0.75
HDAC7-230ENST00000552960 POM121L2Q96KW2 1035 aa10.34□□□□□ -0.75
HDAC7-230ENST00000552960 TIMM9Q9Y5J7 89 aa10.34□□□□□ -0.75
HDAC7-230ENST00000552960 TRAV34A0A0B4J273 112 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 RAB4AP20338 218 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 MEOX1P50221 254 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 PDLIM3Q53GG5 364 aaPredicted RBP10.33□□□□□ -0.76
HDAC7-230ENST00000552960 Q6P435 159 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 ASCL5Q7RTU5 278 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 GCNT2Q8N0V5 402 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 SCCPDHQ8NBX0 429 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 FDCSPQ8NFU4 85 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 ZCCHC14Q8WYQ9 949 aaKnown RBP10.33□□□□□ -0.76
HDAC7-230ENST00000552960 SFRP2Q96HF1 295 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 FAM173AQ9BQD7 235 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 HSPB7Q9UBY9 170 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 OR5B21A6NL26 309 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.33□□□□□ -0.76
HDAC7-230ENST00000552960 CDKN1AP38936 164 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 LHX2P50458 406 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 KRTDAPP60985 99 aa10.33□□□□□ -0.76
HDAC7-230ENST00000552960 SLC35B1P78383 322 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms