RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 WSB1Q9Y6I7 421 aa9.17□□□□□ -0.94
CKAP4-202ENST00000552828 IGHV7-81A0A0B4J1V7 117 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 TRAV41A0A0B4J266 112 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 H7C2Y5 167 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 M0R1X1 148 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 PROP1O75360 226 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 SLC22A5O76082 557 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 LY86O95711 162 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 FCGR2CP31995 323 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 TAS2R46P59540 309 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 DEFA1P59665 94 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 DEFA3P59666 94 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 ACTBP60709 375 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 CBX3Q13185 183 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 CDK10Q15131 360 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 C19orf54Q5BKX5 351 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 GLDNQ6ZMI3 551 aaPredicted RBP9.16□□□□□ -0.94
CKAP4-202ENST00000552828 LAX1Q8IWV1 398 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 CADM3Q8N126 398 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 NPBQ8NG41 125 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 OR5AN1Q8NGI8 311 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 DCUN1D4Q92564 292 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 SNAPC3Q92966 411 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 DIRAS2Q96HU8 199 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 MIXL1Q9H2W2 232 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 SDHAF2Q9NX18 166 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 ANAPC10Q9UM13 185 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 WASHC3Q9Y3C0 194 aa9.16□□□□□ -0.94
CKAP4-202ENST00000552828 SORL1Q92673 2214 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 H0YJW9 148 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 OVOL1O14753 267 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 ATP6V0E1O15342 81 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 TUSC2O75896 110 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 APOA2P02652 100 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 FRMD6-AS1P0C7T7 363 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 LYL1P12980 280 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 NAT1P18440 290 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 CRIP2P52943 208 aaPredicted RBP9.15□□□□□ -0.94
CKAP4-202ENST00000552828 C5orf64Q2M2E5 130 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 SPANXN2Q5MJ10 180 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 FAM131AQ6UXB0 335 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 ZNF645Q8N7E2 425 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 ZNF383Q8NA42 475 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 OR5H2Q8NGV7 314 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 TPSG1Q9NRR2 321 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 RABL2AQ9UBK7 228 aaPredicted RBP9.15□□□□□ -0.94
CKAP4-202ENST00000552828 PAIP2BQ9ULR5 123 aaKnown RBP9.15□□□□□ -0.94
CKAP4-202ENST00000552828 RABL2BQ9UNT1 228 aa9.15□□□□□ -0.94
CKAP4-202ENST00000552828 IGKV1D-13A0A0B4J2D9 117 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 NBR2O15453 112 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 RBBP9O75884 186 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 NDUFA3O95167 84 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 PMP2P02689 132 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 IGKV1-13P0DP09 117 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 SPNP16150 400 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 AADACP22760 399 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 CNTFRP26992 372 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 HLA-DMAP28067 261 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 RCVRNP35243 200 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 RFX2P48378 723 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 TAGLNQ01995 201 aaKnown RBP9.14□□□□□ -0.95
CKAP4-202ENST00000552828 LIN54Q6MZP7 749 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 ACSM6Q6P461 480 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 OVCH2Q7RTZ1 564 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 GIMAP1Q8WWP7 306 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 FCAMRQ8WWV6 532 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 DLX4Q92988 240 aaPredicted RBP9.14□□□□□ -0.95
CKAP4-202ENST00000552828 ADTRPQ96IZ2 230 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 OR5B12Q96R08 314 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 CITED4Q96RK1 184 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 ABHD1Q96SE0 405 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 RNF5Q99942 180 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 PARP11Q9NR21 331 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 EHFQ9NZC4 300 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 KIAA1456Q9P272 454 aa9.14□□□□□ -0.95
CKAP4-202ENST00000552828 LCE6AA0A183 80 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 LINC01619G3V211 115 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 SOX15O60248 233 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 SAP30O75446 220 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 PPYP01298 95 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 RRASP10301 218 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 GP9P14770 177 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 DUTP33316 252 aaKnown RBP9.13□□□□□ -0.95
CKAP4-202ENST00000552828 HRH1P35367 487 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 LINC00205P59089 165 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 MRPS10P82664 201 aaKnown RBP9.13□□□□□ -0.95
CKAP4-202ENST00000552828 DYRK1AQ13627 763 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 IL18Q14116 193 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 ZNF660Q6AZW8 331 aaPredicted RBP9.13□□□□□ -0.95
CKAP4-202ENST00000552828 PYHIN1Q6K0P9 492 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 DHRS11Q6UWP2 260 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 PDPNQ86YL7 162 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 TCTEX1D1Q8N7M0 179 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 POC5Q8NA72 575 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 OR6F1Q8NGZ6 308 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 OR52I2Q8NH67 350 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 SECTM1Q8WVN6 248 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 FLYWCH2Q96CP2 140 aaKnown RBP9.13□□□□□ -0.95
CKAP4-202ENST00000552828 TM2D3Q9BRN9 247 aa9.13□□□□□ -0.95
CKAP4-202ENST00000552828 ALX4Q9H161 411 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms