RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 LINC00473A8K010 186 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 A8MWP6 167 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 SLC17A2O00624 439 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 DEDDO75618 318 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 UCHL1P09936 223 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 GSTT2P0CG29 244 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 GSTT2BP0CG30 244 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 DUTP33316 252 aaKnown RBP12.18□□□□□ -0.46
RAB5C-209ENST00000552162 ARL3P36405 182 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 MRPS15P82914 257 aaKnown RBP12.18□□□□□ -0.46
RAB5C-209ENST00000552162 CDK10Q15131 360 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 ANKRD55Q3KP44 614 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 LAIR2Q6ISS4 152 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 C19orf35Q6ZS72 473 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 SLC25A42Q86VD7 318 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 GPHB5Q86YW7 130 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 MMD2Q8IY49 270 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 OR56B1Q8NGI3 324 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 GFI1Q99684 422 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 ZNF257Q9Y2Q1 563 aa12.18□□□□□ -0.46
RAB5C-209ENST00000552162 KLK5Q9Y337 293 aaPredicted RBP12.18□□□□□ -0.46
RAB5C-209ENST00000552162 ZNF320A2RRD8 509 aa12.17□□□□□ -0.46
RAB5C-209ENST00000552162 DIRAS3O95661 229 aa12.17□□□□□ -0.46
RAB5C-209ENST00000552162 IGHV3-23P01764 117 aa12.17□□□□□ -0.46
RAB5C-209ENST00000552162 FCGR3AP08637 254 aa12.17□□□□□ -0.46
RAB5C-209ENST00000552162 BMI1P35226 326 aa12.17□□□□□ -0.46
RAB5C-209ENST00000552162 MAP2K4P45985 399 aa12.17□□□□□ -0.46
RAB5C-209ENST00000552162 RAB11BQ15907 218 aa12.17□□□□□ -0.46
RAB5C-209ENST00000552162 TM4SF20Q53R12 229 aa12.17□□□□□ -0.46
RAB5C-209ENST00000552162 BTNL8Q6UX41 500 aa12.17□□□□□ -0.46
RAB5C-209ENST00000552162 CLEC19AQ6UXS0 136 aa12.17□□□□□ -0.46
RAB5C-209ENST00000552162 UXS1Q8NBZ7 420 aa12.17□□□□□ -0.46
RAB5C-209ENST00000552162 CCDC140Q96MF4 163 aa12.17□□□□□ -0.46
RAB5C-209ENST00000552162 FBXL7Q9UJT9 491 aa12.17□□□□□ -0.46
RAB5C-209ENST00000552162 TP53TG1Q9Y2A0 90 aa12.17□□□□□ -0.46
RAB5C-209ENST00000552162 HMX3A6NHT5 357 aa12.16□□□□□ -0.46
RAB5C-209ENST00000552162 SPRY2O43597 315 aa12.16□□□□□ -0.46
RAB5C-209ENST00000552162 DEFB135Q30KP9 77 aa12.16□□□□□ -0.46
RAB5C-209ENST00000552162 Q6ZWC4 215 aa12.16□□□□□ -0.46
RAB5C-209ENST00000552162 DHRSXQ8N5I4 330 aa12.16□□□□□ -0.46
RAB5C-209ENST00000552162 BPIFB6Q8NFQ5 453 aa12.16□□□□□ -0.46
RAB5C-209ENST00000552162 MAFIPQ8WZ33 124 aa12.16□□□□□ -0.46
RAB5C-209ENST00000552162 GINS4Q9BRT9 223 aa12.16□□□□□ -0.46
RAB5C-209ENST00000552162 MND1Q9BWT6 205 aa12.16□□□□□ -0.46
RAB5C-209ENST00000552162 PLCXD1Q9NUJ7 323 aa12.16□□□□□ -0.46
RAB5C-209ENST00000552162 KCNK7Q9Y2U2 307 aa12.16□□□□□ -0.46
RAB5C-209ENST00000552162 S4R3C0 116 aa12.16□□□□□ -0.46
RAB5C-209ENST00000552162 TEX22C9J3V5 150 aa12.15□□□□□ -0.46
RAB5C-209ENST00000552162 CDK1P06493 297 aa12.15□□□□□ -0.46
RAB5C-209ENST00000552162 GNAO1P09471 354 aa12.15□□□□□ -0.46
RAB5C-209ENST00000552162 APOC4P55056 127 aa12.15□□□□□ -0.46
RAB5C-209ENST00000552162 CLDN12P56749 244 aa12.15□□□□□ -0.46
RAB5C-209ENST00000552162 FAM106AQ4KMX7 169 aa12.15□□□□□ -0.46
RAB5C-209ENST00000552162 C8orf59Q8N0T1 100 aaPredicted RBP12.15□□□□□ -0.46
RAB5C-209ENST00000552162 DCUN1D5Q9BTE7 237 aa12.15□□□□□ -0.46
RAB5C-209ENST00000552162 FKBP14Q9NWM8 211 aa12.15□□□□□ -0.46
RAB5C-209ENST00000552162 AK6Q9Y3D8 172 aaKnown RBP12.15□□□□□ -0.46
RAB5C-209ENST00000552162 DPPA5A6NC42 116 aa12.14□□□□□ -0.47
RAB5C-209ENST00000552162 NPIPB5A8MRT5 1133 aa12.14□□□□□ -0.47
RAB5C-209ENST00000552162 DENRO43583 198 aaKnown RBP12.14□□□□□ -0.47
RAB5C-209ENST00000552162 FCGR3BO75015 233 aa12.14□□□□□ -0.47
RAB5C-209ENST00000552162 ATF4P18848 351 aaPredicted RBP12.14□□□□□ -0.47
RAB5C-209ENST00000552162 OR4A47Q6IF82 309 aa12.14□□□□□ -0.47
RAB5C-209ENST00000552162 OR1L6Q8NGR2 347 aa12.14□□□□□ -0.47
RAB5C-209ENST00000552162 FAM3DQ96BQ1 224 aa12.14□□□□□ -0.47
RAB5C-209ENST00000552162 RAB3CQ96E17 227 aa12.14□□□□□ -0.47
RAB5C-209ENST00000552162 TRAV25A0A0B4J276 109 aa12.13□□□□□ -0.47
RAB5C-209ENST00000552162 PLA2G7Q13093 441 aa12.13□□□□□ -0.47
RAB5C-209ENST00000552162 OR2B11Q5JQS5 317 aa12.13□□□□□ -0.47
RAB5C-209ENST00000552162 LGALS9CQ6DKI2 356 aa12.13□□□□□ -0.47
RAB5C-209ENST00000552162 RBPMS2Q6ZRY4 209 aaKnown RBP12.13□□□□□ -0.47
RAB5C-209ENST00000552162 KCTD9Q7L273 389 aa12.13□□□□□ -0.47
RAB5C-209ENST00000552162 H1FOOQ8IZA3 346 aaPredicted RBP12.13□□□□□ -0.47
RAB5C-209ENST00000552162 VKORC1L1Q8N0U8 176 aa12.13□□□□□ -0.47
RAB5C-209ENST00000552162 FBLIM1Q8WUP2 373 aa12.13□□□□□ -0.47
RAB5C-209ENST00000552162 TMEM203Q969S6 136 aa12.13□□□□□ -0.47
RAB5C-209ENST00000552162 EEF1AKMT3Q96AZ1 226 aa12.13□□□□□ -0.47
RAB5C-209ENST00000552162 FANCD2OSQ96PS1 177 aa12.13□□□□□ -0.47
RAB5C-209ENST00000552162 LSM2Q9Y333 95 aaKnown RBP12.13□□□□□ -0.47
RAB5C-209ENST00000552162 TMEM272A0A1B0GTI8 110 aa12.12□□□□□ -0.47
RAB5C-209ENST00000552162 E7EUB6 86 aa12.12□□□□□ -0.47
RAB5C-209ENST00000552162 KBTBD11O94819 623 aa12.12□□□□□ -0.47
RAB5C-209ENST00000552162 IL6RP08887 468 aaPredicted RBP12.12□□□□□ -0.47
RAB5C-209ENST00000552162 RPL27AP46776 148 aaKnown RBP12.12□□□□□ -0.47
RAB5C-209ENST00000552162 SPHARQ15513 63 aa12.12□□□□□ -0.47
RAB5C-209ENST00000552162 MED22Q15528 200 aa12.12□□□□□ -0.47
RAB5C-209ENST00000552162 C2orf76Q3KRA6 126 aa12.12□□□□□ -0.47
RAB5C-209ENST00000552162 LIPKQ5VXJ0 399 aa12.12□□□□□ -0.47
RAB5C-209ENST00000552162 UNQ9165/PRO28630Q6UXU0 137 aa12.12□□□□□ -0.47
RAB5C-209ENST00000552162 PACRGLQ8N7B6 248 aa12.12□□□□□ -0.47
RAB5C-209ENST00000552162 TMEM217Q8N7C4 229 aa12.12□□□□□ -0.47
RAB5C-209ENST00000552162 PHLDA1Q8WV24 401 aaPredicted RBP12.12□□□□□ -0.47
RAB5C-209ENST00000552162 FYTTD1Q96QD9 318 aaKnown RBP12.12□□□□□ -0.47
RAB5C-209ENST00000552162 OR51E2Q9H255 320 aa12.12□□□□□ -0.47
RAB5C-209ENST00000552162 SLC2A9Q9NRM0 540 aa12.12□□□□□ -0.47
RAB5C-209ENST00000552162 UBQLN2Q9UHD9 624 aa12.12□□□□□ -0.47
RAB5C-209ENST00000552162 MRPS7Q9Y2R9 242 aaKnown RBP12.12□□□□□ -0.47
RAB5C-209ENST00000552162 A0A075B6Q4 140 aa12.11□□□□□ -0.47
RAB5C-209ENST00000552162 A0A1B0GW64 132 aa12.11□□□□□ -0.47
RAB5C-209ENST00000552162 UBE2CO00762 179 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms