RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 TMEM59Q9BXS4 323 aa11.24□□□□□ -0.61
CACNB3-220ENST00000551716 HRH4Q9H3N8 390 aa11.24□□□□□ -0.61
CACNB3-220ENST00000551716 FGF20Q9NP95 211 aaPredicted RBP11.24□□□□□ -0.61
CACNB3-220ENST00000551716 AASSQ9UDR5 926 aa11.24□□□□□ -0.61
CACNB3-220ENST00000551716 DYNC1H1Q14204 4646 aaKnown RBP11.24□□□□□ -0.61
CACNB3-220ENST00000551716 TRBV7-1A0A0A6YYK4 115 aa11.23□□□□□ -0.61
CACNB3-220ENST00000551716 A0A1W2PPK0 400 aa11.23□□□□□ -0.61
CACNB3-220ENST00000551716 NPIPB5A8MRT5 1133 aa11.23□□□□□ -0.61
CACNB3-220ENST00000551716 HIST1H1BP16401 226 aaKnown RBP11.23□□□□□ -0.61
CACNB3-220ENST00000551716 HTR2CP28335 458 aa11.23□□□□□ -0.61
CACNB3-220ENST00000551716 RPS11P62280 158 aaKnown RBP eCLIP11.23□□□□□ -0.61
CACNB3-220ENST00000551716 CENPSQ8N2Z9 138 aa11.23□□□□□ -0.61
CACNB3-220ENST00000551716 CCDC197Q8NCU1 140 aa11.23□□□□□ -0.61
CACNB3-220ENST00000551716 OR4A5Q8NH83 315 aa11.23□□□□□ -0.61
CACNB3-220ENST00000551716 CCDC140Q96MF4 163 aa11.23□□□□□ -0.61
CACNB3-220ENST00000551716 TM2D1Q9BX74 207 aa11.23□□□□□ -0.61
CACNB3-220ENST00000551716 ZNF430Q9H8G1 570 aaPredicted RBP11.23□□□□□ -0.61
CACNB3-220ENST00000551716 Q9N2K0 584 aa11.23□□□□□ -0.61
CACNB3-220ENST00000551716 SDHAF2Q9NX18 166 aa11.23□□□□□ -0.61
CACNB3-220ENST00000551716 DNAH17Q9UFH2 4485 aa11.23□□□□□ -0.61
CACNB3-220ENST00000551716 RTL8CO15255 209 aa11.22□□□□□ -0.61
CACNB3-220ENST00000551716 CLEC3BP05452 202 aa11.22□□□□□ -0.61
CACNB3-220ENST00000551716 SRMP19623 302 aa11.22□□□□□ -0.61
CACNB3-220ENST00000551716 CDK10Q15131 360 aa11.22□□□□□ -0.61
CACNB3-220ENST00000551716 ODF3L2Q3SX64 289 aa11.22□□□□□ -0.61
CACNB3-220ENST00000551716 TTC23Q5W5X9 447 aa11.22□□□□□ -0.61
CACNB3-220ENST00000551716 IDO2Q6ZQW0 420 aa11.22□□□□□ -0.61
CACNB3-220ENST00000551716 CXorf58Q96LI9 332 aa11.22□□□□□ -0.61
CACNB3-220ENST00000551716 SAC3D1A6NKF1 404 aa11.21□□□□□ -0.61
CACNB3-220ENST00000551716 TRDCB7Z8K6 153 aa11.21□□□□□ -0.61
CACNB3-220ENST00000551716 CRYZL1O95825 349 aa11.21□□□□□ -0.61
CACNB3-220ENST00000551716 IGHV3-23P01764 117 aa11.21□□□□□ -0.61
CACNB3-220ENST00000551716 ETV1P50549 477 aa11.21□□□□□ -0.61
CACNB3-220ENST00000551716 ZIK1Q3SY52 487 aaPredicted RBP11.21□□□□□ -0.61
CACNB3-220ENST00000551716 OR2G6Q5TZ20 316 aa11.21□□□□□ -0.61
CACNB3-220ENST00000551716 UNQ9165/PRO28630Q6UXU0 137 aa11.21□□□□□ -0.61
CACNB3-220ENST00000551716 POM121L12Q8N7R1 296 aa11.21□□□□□ -0.61
CACNB3-220ENST00000551716 OR5B3Q8NH48 314 aa11.21□□□□□ -0.61
CACNB3-220ENST00000551716 OR2D2Q9H210 308 aa11.21□□□□□ -0.61
CACNB3-220ENST00000551716 C12orf4Q9NQ89 552 aa11.21□□□□□ -0.61
CACNB3-220ENST00000551716 AK3Q9UIJ7 227 aa11.21□□□□□ -0.61
CACNB3-220ENST00000551716 IRGMA1A4Y4 181 aa11.2□□□□□ -0.62
CACNB3-220ENST00000551716 BPNT1O95861 308 aa11.2□□□□□ -0.62
CACNB3-220ENST00000551716 P0DMU3 169 aa11.2□□□□□ -0.62
CACNB3-220ENST00000551716 FAM231AP0DMU4 169 aa11.2□□□□□ -0.62
CACNB3-220ENST00000551716 FAM231CP0DMU5 169 aa11.2□□□□□ -0.62
CACNB3-220ENST00000551716 MYL12AP19105 171 aa11.2□□□□□ -0.62
CACNB3-220ENST00000551716 KLK9Q2XQG4 91 aa11.2□□□□□ -0.62
CACNB3-220ENST00000551716 LGALS9BQ3B8N2 356 aa11.2□□□□□ -0.62
CACNB3-220ENST00000551716 OR10K2Q6IF99 312 aa11.2□□□□□ -0.62
CACNB3-220ENST00000551716 CEACAM19Q7Z692 300 aa11.2□□□□□ -0.62
CACNB3-220ENST00000551716 OR4A4PQ8NGN8 299 aa11.2□□□□□ -0.62
CACNB3-220ENST00000551716 CD300LFQ8TDQ1 290 aa11.2□□□□□ -0.62
CACNB3-220ENST00000551716 FANCD2OSQ96PS1 177 aa11.2□□□□□ -0.62
CACNB3-220ENST00000551716 DERL3Q96Q80 235 aa11.2□□□□□ -0.62
CACNB3-220ENST00000551716 FYTTD1Q96QD9 318 aaKnown RBP11.2□□□□□ -0.62
CACNB3-220ENST00000551716 SLC2A9Q9NRM0 540 aa11.2□□□□□ -0.62
CACNB3-220ENST00000551716 KLK9Q9UKQ9 250 aa11.2□□□□□ -0.62
CACNB3-220ENST00000551716 IGKV1-6A0A0C4DH72 117 aa11.19□□□□□ -0.62
CACNB3-220ENST00000551716 CRYGCP07315 174 aa11.19□□□□□ -0.62
CACNB3-220ENST00000551716 MAPK3P27361 379 aaPredicted RBP11.19□□□□□ -0.62
CACNB3-220ENST00000551716 SOHLH1Q5JUK2 328 aa11.19□□□□□ -0.62
CACNB3-220ENST00000551716 PVRIGQ6DKI7 326 aa11.19□□□□□ -0.62
CACNB3-220ENST00000551716 PLET1Q6UQ28 207 aa11.19□□□□□ -0.62
CACNB3-220ENST00000551716 OR10J5Q8NHC4 309 aa11.19□□□□□ -0.62
CACNB3-220ENST00000551716 PGLYRP3Q96LB9 341 aa11.19□□□□□ -0.62
CACNB3-220ENST00000551716 RNF126Q9BV68 326 aa11.19□□□□□ -0.62
CACNB3-220ENST00000551716 HSF4Q9ULV5 492 aa11.19□□□□□ -0.62
CACNB3-220ENST00000551716 RBM7Q9Y580 266 aaKnown RBP11.19□□□□□ -0.62
CACNB3-220ENST00000551716 IGHV4-4A0A075B6R2 117 aa11.18□□□□□ -0.62
CACNB3-220ENST00000551716 TRAV10A0A0B4J240 114 aa11.18□□□□□ -0.62
CACNB3-220ENST00000551716 HMX3A6NHT5 357 aa11.18□□□□□ -0.62
CACNB3-220ENST00000551716 DIRAS3O95661 229 aa11.18□□□□□ -0.62
CACNB3-220ENST00000551716 SAA1P0DJI8 122 aaPredicted RBP11.18□□□□□ -0.62
CACNB3-220ENST00000551716 DEFA4P12838 97 aa11.18□□□□□ -0.62
CACNB3-220ENST00000551716 MAS1LP35410 378 aa11.18□□□□□ -0.62
CACNB3-220ENST00000551716 TMEM187Q14656 261 aa11.18□□□□□ -0.62
CACNB3-220ENST00000551716 GGHQ92820 318 aa11.18□□□□□ -0.62
CACNB3-220ENST00000551716 NICN1Q9BSH3 213 aa11.18□□□□□ -0.62
CACNB3-220ENST00000551716 HDHD3Q9BSH5 251 aaPredicted RBP11.18□□□□□ -0.62
CACNB3-220ENST00000551716 DCUN1D5Q9BTE7 237 aa11.18□□□□□ -0.62
CACNB3-220ENST00000551716 URM1Q9BTM9 101 aaKnown RBP11.18□□□□□ -0.62
CACNB3-220ENST00000551716 OR51E2Q9H255 320 aa11.18□□□□□ -0.62
CACNB3-220ENST00000551716 DAZ1Q9NQZ3 744 aaKnown RBP11.18□□□□□ -0.62
CACNB3-220ENST00000551716 S4R3C0 116 aa11.18□□□□□ -0.62
CACNB3-220ENST00000551716 PKD1P98161 4303 aa11.17□□□□□ -0.62
CACNB3-220ENST00000551716 TEX22C9J3V5 150 aa11.17□□□□□ -0.62
CACNB3-220ENST00000551716 EI24O14681 340 aa11.17□□□□□ -0.62
CACNB3-220ENST00000551716 CDK2AP2O75956 126 aa11.17□□□□□ -0.62
CACNB3-220ENST00000551716 LALBAP00709 142 aa11.17□□□□□ -0.62
CACNB3-220ENST00000551716 DUTP33316 252 aaKnown RBP11.17□□□□□ -0.62
CACNB3-220ENST00000551716 TAS2R43P59537 309 aa11.17□□□□□ -0.62
CACNB3-220ENST00000551716 SSX1Q16384 188 aa11.17□□□□□ -0.62
CACNB3-220ENST00000551716 C1orf100Q5SVJ3 147 aa11.17□□□□□ -0.62
CACNB3-220ENST00000551716 C10orf55Q5SWW7 151 aa11.17□□□□□ -0.62
CACNB3-220ENST00000551716 VSTM2AQ8TAG5 236 aa11.17□□□□□ -0.62
CACNB3-220ENST00000551716 SLC7A6OSQ96CW6 309 aaPredicted RBP11.17□□□□□ -0.62
CACNB3-220ENST00000551716 CMSS1Q9BQ75 279 aaKnown RBP11.17□□□□□ -0.62
CACNB3-220ENST00000551716 CENPOQ9BU64 300 aa11.17□□□□□ -0.62
CACNB3-220ENST00000551716 ZNF436Q9C0F3 470 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms