RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 H7C2Y5 167 aa11.53□□□□□ -0.56
LETMD1-229ENST00000551261 TAAR5O14804 337 aa11.53□□□□□ -0.56
LETMD1-229ENST00000551261 CD1BP29016 333 aa11.53□□□□□ -0.56
LETMD1-229ENST00000551261 KRTAP10-9P60411 292 aa11.53□□□□□ -0.56
LETMD1-229ENST00000551261 VAMP2P63027 116 aa11.53□□□□□ -0.56
LETMD1-229ENST00000551261 BAXQ07812 192 aa11.53□□□□□ -0.56
LETMD1-229ENST00000551261 HABP2Q14520 560 aaPredicted RBP11.53□□□□□ -0.56
LETMD1-229ENST00000551261 LAMTOR1Q6IAA8 161 aa11.53□□□□□ -0.56
LETMD1-229ENST00000551261 HCP5Q6MZN7 132 aa11.53□□□□□ -0.56
LETMD1-229ENST00000551261 C1orf229Q6ZS94 237 aaPredicted RBP11.53□□□□□ -0.56
LETMD1-229ENST00000551261 LINC01356Q8N9X3 169 aa11.53□□□□□ -0.56
LETMD1-229ENST00000551261 OR4A16Q8NH70 328 aa11.53□□□□□ -0.56
LETMD1-229ENST00000551261 GRPEL2Q8TAA5 225 aa11.53□□□□□ -0.56
LETMD1-229ENST00000551261 RNF126Q9BV68 326 aa11.53□□□□□ -0.56
LETMD1-229ENST00000551261 SLC25A31Q9H0C2 315 aa11.53□□□□□ -0.56
LETMD1-229ENST00000551261 TMEM140Q9NV12 185 aa11.53□□□□□ -0.56
LETMD1-229ENST00000551261 ITGB1BP2Q9UKP3 347 aa11.53□□□□□ -0.56
LETMD1-229ENST00000551261 ZNF257Q9Y2Q1 563 aa11.53□□□□□ -0.56
LETMD1-229ENST00000551261 ARID1AO14497 2285 aa11.52□□□□□ -0.56
LETMD1-229ENST00000551261 AKAP6Q13023 2319 aa11.52□□□□□ -0.57
LETMD1-229ENST00000551261 A0A096LNT2 108 aa11.52□□□□□ -0.57
LETMD1-229ENST00000551261 KANTRA0A1W2PQU2 76 aa11.52□□□□□ -0.57
LETMD1-229ENST00000551261 C15orf61A6NNL5 157 aa11.52□□□□□ -0.57
LETMD1-229ENST00000551261 RNASEK-C17orf49H0YIS7 233 aa11.52□□□□□ -0.57
LETMD1-229ENST00000551261 H0YIZ8 118 aa11.52□□□□□ -0.57
LETMD1-229ENST00000551261 SHOXO15266 292 aa11.52□□□□□ -0.57
LETMD1-229ENST00000551261 SYNGR2O43760 224 aa11.52□□□□□ -0.57
LETMD1-229ENST00000551261 RPL23AP62750 156 aaKnown RBP11.52□□□□□ -0.57
LETMD1-229ENST00000551261 EIF5AP63241 154 aaKnown RBP11.52□□□□□ -0.57
LETMD1-229ENST00000551261 TNFRSF9Q07011 255 aa11.52□□□□□ -0.57
LETMD1-229ENST00000551261 VMA21Q3ZAQ7 101 aa11.52□□□□□ -0.57
LETMD1-229ENST00000551261 LGALSLQ3ZCW2 172 aaPredicted RBP11.52□□□□□ -0.57
LETMD1-229ENST00000551261 MALSU1Q96EH3 234 aa11.52□□□□□ -0.57
LETMD1-229ENST00000551261 CLCC1Q96S66 551 aa11.52□□□□□ -0.57
LETMD1-229ENST00000551261 TBX15Q96SF7 602 aa11.52□□□□□ -0.57
LETMD1-229ENST00000551261 TSNAXQ99598 290 aaKnown RBP11.52□□□□□ -0.57
LETMD1-229ENST00000551261 MS4A7Q9GZW8 240 aaPredicted RBP11.52□□□□□ -0.57
LETMD1-229ENST00000551261 MMP26Q9NRE1 261 aa11.52□□□□□ -0.57
LETMD1-229ENST00000551261 LYRM2Q9NU23 88 aaPredicted RBP11.52□□□□□ -0.57
LETMD1-229ENST00000551261 FOXA2Q9Y261 457 aaPredicted RBP11.52□□□□□ -0.57
LETMD1-229ENST00000551261 RCL1Q9Y2P8 373 aaKnown RBP11.52□□□□□ -0.57
LETMD1-229ENST00000551261 TENM4Q6N022 2769 aa11.52□□□□□ -0.57
LETMD1-229ENST00000551261 PTPN13Q12923 2485 aa11.51□□□□□ -0.57
LETMD1-229ENST00000551261 A0A1W2PPI3 338 aa11.51□□□□□ -0.57
LETMD1-229ENST00000551261 RNF222A6NCQ9 220 aa11.51□□□□□ -0.57
LETMD1-229ENST00000551261 BCL2L11O43521 198 aa11.51□□□□□ -0.57
LETMD1-229ENST00000551261 TSC22D2O75157 780 aa11.51□□□□□ -0.57
LETMD1-229ENST00000551261 RBMXL2O75526 392 aaKnown RBP11.51□□□□□ -0.57
LETMD1-229ENST00000551261 BPIFB3P59826 476 aa11.51□□□□□ -0.57
LETMD1-229ENST00000551261 SPCS3P61009 180 aa11.51□□□□□ -0.57
LETMD1-229ENST00000551261 UBE2KP61086 200 aa11.51□□□□□ -0.57
LETMD1-229ENST00000551261 OR4A47Q6IF82 309 aa11.51□□□□□ -0.57
LETMD1-229ENST00000551261 OR5B3Q8NH48 314 aa11.51□□□□□ -0.57
LETMD1-229ENST00000551261 ARL6Q9H0F7 186 aa11.51□□□□□ -0.57
LETMD1-229ENST00000551261 OR5AC2Q9NZP5 309 aa11.51□□□□□ -0.57
LETMD1-229ENST00000551261 ZNRD1Q9P1U0 126 aa11.51□□□□□ -0.57
LETMD1-229ENST00000551261 AUP1Q9Y679 476 aa11.51□□□□□ -0.57
LETMD1-229ENST00000551261 DOPEY2Q9Y3R5 2298 aa11.51□□□□□ -0.57
LETMD1-229ENST00000551261 SSSCA1O60232 199 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 KBTBD11O94819 623 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 IGKV1-16P04430 117 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 IL6RP08887 468 aaPredicted RBP11.5□□□□□ -0.57
LETMD1-229ENST00000551261 CXCL2P19875 107 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 RPL12P30050 165 aaKnown RBP11.5□□□□□ -0.57
LETMD1-229ENST00000551261 REG1BP48304 166 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 ATP5IP56385 69 aaPredicted RBP11.5□□□□□ -0.57
LETMD1-229ENST00000551261 RPP30P78346 268 aaKnown RBP11.5□□□□□ -0.57
LETMD1-229ENST00000551261 RELBQ01201 579 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 CXorf66Q5JRM2 361 aaPredicted RBP11.5□□□□□ -0.57
LETMD1-229ENST00000551261 Q6ZRM9 215 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 TMUB2Q71RG4 321 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 SLC51BQ86UW2 128 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 STX12Q86Y82 276 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 MRPL41Q8IXM3 137 aaKnown RBP11.5□□□□□ -0.57
LETMD1-229ENST00000551261 PUSL1Q8N0Z8 303 aaKnown RBP11.5□□□□□ -0.57
LETMD1-229ENST00000551261 OR2C3Q8N628 320 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 TEX29Q8N6K0 151 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 TEX45Q8NA69 505 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 TMEM167AQ8TBQ9 72 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 SMIM8Q96KF7 97 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 FOXC2Q99958 501 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 C11orf1Q9H5F2 150 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 TMEM14BQ9NUH8 114 aa11.5□□□□□ -0.57
LETMD1-229ENST00000551261 ANKRD17O75179 2603 aaKnown RBP11.5□□□□□ -0.57
LETMD1-229ENST00000551261 RGS13O14921 159 aa11.49□□□□□ -0.57
LETMD1-229ENST00000551261 BRS3P32247 399 aa11.49□□□□□ -0.57
LETMD1-229ENST00000551261 MAS1LP35410 378 aa11.49□□□□□ -0.57
LETMD1-229ENST00000551261 RPS16P62249 146 aaKnown RBP11.49□□□□□ -0.57
LETMD1-229ENST00000551261 POLR2GP62487 172 aaKnown RBP eCLIP11.49□□□□□ -0.57
LETMD1-229ENST00000551261 OPCMLQ14982 345 aa11.49□□□□□ -0.57
LETMD1-229ENST00000551261 ZNF767PQ75MW2 155 aa11.49□□□□□ -0.57
LETMD1-229ENST00000551261 MOB3BQ86TA1 216 aa11.49□□□□□ -0.57
LETMD1-229ENST00000551261 OR8H1Q8NGG4 311 aa11.49□□□□□ -0.57
LETMD1-229ENST00000551261 ARPC5LQ9BPX5 153 aa11.49□□□□□ -0.57
LETMD1-229ENST00000551261 REG4Q9BYZ8 158 aa11.49□□□□□ -0.57
LETMD1-229ENST00000551261 ZC4H2Q9NQZ6 224 aa11.49□□□□□ -0.57
LETMD1-229ENST00000551261 NUP50Q9UKX7 468 aa11.49□□□□□ -0.57
LETMD1-229ENST00000551261 SPG11Q96JI7 2443 aa11.49□□□□□ -0.57
LETMD1-229ENST00000551261 NAV2Q8IVL1 2488 aa11.49□□□□□ -0.57
LETMD1-229ENST00000551261 UPK2O00526 184 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms