RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 ALMS1Q8TCU4 4167 aa9.71□□□□□ -0.85
PTCH1-221ENST00000550914 LINC00473A8K010 186 aa9.71□□□□□ -0.86
PTCH1-221ENST00000550914 ZNF785A8K8V0 405 aa9.71□□□□□ -0.86
PTCH1-221ENST00000550914 ACTL6BO94805 426 aa9.71□□□□□ -0.86
PTCH1-221ENST00000550914 APELAP0DMC3 54 aa9.71□□□□□ -0.86
PTCH1-221ENST00000550914 HIST1H1DP16402 221 aaKnown RBP9.71□□□□□ -0.86
PTCH1-221ENST00000550914 RAB6AP20340 208 aa9.71□□□□□ -0.86
PTCH1-221ENST00000550914 FABP5Q01469 135 aa9.71□□□□□ -0.86
PTCH1-221ENST00000550914 ZNF45Q02386 682 aa9.71□□□□□ -0.86
PTCH1-221ENST00000550914 SSX1Q16384 188 aa9.71□□□□□ -0.86
PTCH1-221ENST00000550914 DEFB114Q30KQ6 69 aa9.71□□□□□ -0.86
PTCH1-221ENST00000550914 IDO2Q6ZQW0 420 aa9.71□□□□□ -0.86
PTCH1-221ENST00000550914 MMD2Q8IY49 270 aa9.71□□□□□ -0.86
PTCH1-221ENST00000550914 H1FOOQ8IZA3 346 aaPredicted RBP9.71□□□□□ -0.86
PTCH1-221ENST00000550914 ACOT12Q8WYK0 555 aa9.71□□□□□ -0.86
PTCH1-221ENST00000550914 ZNF430Q9H8G1 570 aaPredicted RBP9.71□□□□□ -0.86
PTCH1-221ENST00000550914 PLEKHA3Q9HB20 300 aa9.71□□□□□ -0.86
PTCH1-221ENST00000550914 TECRQ9NZ01 308 aaKnown RBP9.71□□□□□ -0.86
PTCH1-221ENST00000550914 TRAV1-2A0A0B4J238 106 aa9.7□□□□□ -0.86
PTCH1-221ENST00000550914 LGALS9O00182 355 aa9.7□□□□□ -0.86
PTCH1-221ENST00000550914 RAB27BO00194 218 aa9.7□□□□□ -0.86
PTCH1-221ENST00000550914 PDCD5O14737 125 aa9.7□□□□□ -0.86
PTCH1-221ENST00000550914 RGS10O43665 173 aa9.7□□□□□ -0.86
PTCH1-221ENST00000550914 SLC22A5O76082 557 aa9.7□□□□□ -0.86
PTCH1-221ENST00000550914 SAA1P0DJI8 122 aaPredicted RBP9.7□□□□□ -0.86
PTCH1-221ENST00000550914 GNB3P16520 340 aa9.7□□□□□ -0.86
PTCH1-221ENST00000550914 PLA2G7Q13093 441 aa9.7□□□□□ -0.86
PTCH1-221ENST00000550914 ARL6IP1Q15041 203 aa9.7□□□□□ -0.86
PTCH1-221ENST00000550914 HES5Q5TA89 166 aa9.7□□□□□ -0.86
PTCH1-221ENST00000550914 DYNLRB2Q8TF09 96 aa9.7□□□□□ -0.86
PTCH1-221ENST00000550914 MGLLQ99685 303 aa9.7□□□□□ -0.86
PTCH1-221ENST00000550914 RETNQ9HD89 108 aa9.7□□□□□ -0.86
PTCH1-221ENST00000550914 ZNF257Q9Y2Q1 563 aa9.7□□□□□ -0.86
PTCH1-221ENST00000550914 RBMY1BA6NDE4 496 aaKnown RBP9.69□□□□□ -0.86
PTCH1-221ENST00000550914 METTL21EPA6NDL7 271 aa9.69□□□□□ -0.86
PTCH1-221ENST00000550914 RBMY1EA6NEQ0 496 aaKnown RBP9.69□□□□□ -0.86
PTCH1-221ENST00000550914 C2orf70A6NJV1 201 aa9.69□□□□□ -0.86
PTCH1-221ENST00000550914 GGCTO75223 188 aaKnown RBP9.69□□□□□ -0.86
PTCH1-221ENST00000550914 PRH1P02810 166 aa9.69□□□□□ -0.86
PTCH1-221ENST00000550914 RBMY1DP0C7P1 496 aaKnown RBP9.69□□□□□ -0.86
PTCH1-221ENST00000550914 DTYMKP23919 212 aa9.69□□□□□ -0.86
PTCH1-221ENST00000550914 TALDO1P37837 337 aa9.69□□□□□ -0.86
PTCH1-221ENST00000550914 KIR2DS2P43631 304 aa9.69□□□□□ -0.86
PTCH1-221ENST00000550914 MAP2K4P45985 399 aa9.69□□□□□ -0.86
PTCH1-221ENST00000550914 C15orf32Q32M92 178 aa9.69□□□□□ -0.86
PTCH1-221ENST00000550914 PRSS48Q7RTY5 328 aa9.69□□□□□ -0.86
PTCH1-221ENST00000550914 ZNF645Q8N7E2 425 aa9.69□□□□□ -0.86
PTCH1-221ENST00000550914 MAFIPQ8WZ33 124 aa9.69□□□□□ -0.86
PTCH1-221ENST00000550914 SRD5A3Q9H8P0 318 aa9.69□□□□□ -0.86
PTCH1-221ENST00000550914 PRELID3BQ9Y3B1 194 aa9.69□□□□□ -0.86
PTCH1-221ENST00000550914 DMRT1Q9Y5R6 373 aa9.69□□□□□ -0.86
PTCH1-221ENST00000550914 IFITM5A6NNB3 132 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 OR11H12B2RN74 326 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 CD7P09564 240 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 CTXN2P0C2S0 81 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 FOLR2P14207 255 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 CD36P16671 472 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 MAS1LP35410 378 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 ARFRP1Q13795 201 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 KLK9Q2XQG4 91 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 DMRTA1Q5VZB9 504 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 KCTD9Q7L273 389 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 GPHB5Q86YW7 130 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 DEFB125Q8N687 156 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 VSTM2AQ8TAG5 236 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 FAM110AQ9BQ89 295 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 OR51E2Q9H255 320 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 KLK9Q9UKQ9 250 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 MRPS7Q9Y2R9 242 aaKnown RBP9.68□□□□□ -0.86
PTCH1-221ENST00000550914 OR2W1Q9Y3N9 320 aa9.68□□□□□ -0.86
PTCH1-221ENST00000550914 A0A075B6Q4 140 aa9.67□□□□□ -0.86
PTCH1-221ENST00000550914 NPIPB5A8MRT5 1133 aa9.67□□□□□ -0.86
PTCH1-221ENST00000550914 TEX22C9J3V5 150 aa9.67□□□□□ -0.86
PTCH1-221ENST00000550914 FCGR3BO75015 233 aa9.67□□□□□ -0.86
PTCH1-221ENST00000550914 OR2J3O76001 311 aa9.67□□□□□ -0.86
PTCH1-221ENST00000550914 HLA-DQB1P01920 261 aa9.67□□□□□ -0.86
PTCH1-221ENST00000550914 C10orf55Q5SWW7 151 aa9.67□□□□□ -0.86
PTCH1-221ENST00000550914 SLC16A13Q7RTY0 426 aa9.67□□□□□ -0.86
PTCH1-221ENST00000550914 DCUN1D5Q9BTE7 237 aa9.67□□□□□ -0.86
PTCH1-221ENST00000550914 IGKV1D-8A0A087WSZ0 117 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 A8MWP6 167 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 PPP5D1E7EU14 171 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 KBTBD11O94819 623 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 DHFRP00374 187 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 GALP22466 123 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 CBLN1P23435 193 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 CRHBPP24387 322 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 MYL9P24844 172 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 OR10A3P58181 314 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 TBCEQ15813 527 aaPredicted RBP9.66□□□□□ -0.86
PTCH1-221ENST00000550914 GUCA2BQ16661 112 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 FAM106AQ4KMX7 169 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 PUSL1Q8N0Z8 303 aaKnown RBP9.66□□□□□ -0.86
PTCH1-221ENST00000550914 OR4S2Q8NH73 311 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 TMEM167AQ8TBQ9 72 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 OR2A7Q96R45 310 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 HSD17B10Q99714 261 aaKnown RBP9.66□□□□□ -0.86
PTCH1-221ENST00000550914 CCDC90BQ9GZT6 254 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 WFDC10AQ9H1F0 79 aa9.66□□□□□ -0.86
PTCH1-221ENST00000550914 DCSTAMPQ9H295 470 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms