RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 SLC38A6Q8IZM9 456 aa10.57□□□□□ -0.72
NUP188-211ENST00000550219 POC5Q8NA72 575 aa10.57□□□□□ -0.72
NUP188-211ENST00000550219 ZNF486Q96H40 463 aaPredicted RBP10.57□□□□□ -0.72
NUP188-211ENST00000550219 SCGB3A2Q96PL1 93 aa10.57□□□□□ -0.72
NUP188-211ENST00000550219 DUX3Q96PT4 197 aa10.57□□□□□ -0.72
NUP188-211ENST00000550219 IGHV1-3A0A0C4DH29 117 aa10.56□□□□□ -0.72
NUP188-211ENST00000550219 GPR31O00270 319 aa10.56□□□□□ -0.72
NUP188-211ENST00000550219 CTSDP07339 412 aaPredicted RBP10.56□□□□□ -0.72
NUP188-211ENST00000550219 RND3P61587 244 aa10.56□□□□□ -0.72
NUP188-211ENST00000550219 RBMS2Q15434 407 aaKnown RBP10.56□□□□□ -0.72
NUP188-211ENST00000550219 RPL39P5Q59GN2 51 aa10.56□□□□□ -0.72
NUP188-211ENST00000550219 DUSP18Q8NEJ0 188 aa10.56□□□□□ -0.72
NUP188-211ENST00000550219 ZFAND1Q8TCF1 268 aa10.56□□□□□ -0.72
NUP188-211ENST00000550219 MARCH1Q8TCQ1 289 aa10.56□□□□□ -0.72
NUP188-211ENST00000550219 RTN4IP1Q8WWV3 396 aaPredicted RBP10.56□□□□□ -0.72
NUP188-211ENST00000550219 S1PR3Q99500 378 aa10.56□□□□□ -0.72
NUP188-211ENST00000550219 RTBDNQ9BSG5 229 aaPredicted RBP10.56□□□□□ -0.72
NUP188-211ENST00000550219 GPR61Q9BZJ8 451 aa10.56□□□□□ -0.72
NUP188-211ENST00000550219 C5orf66Q9H5L9 145 aa10.56□□□□□ -0.72
NUP188-211ENST00000550219 VSIG4Q9Y279 399 aa10.56□□□□□ -0.72
NUP188-211ENST00000550219 NOTCH3Q9UM47 2321 aa10.56□□□□□ -0.72
NUP188-211ENST00000550219 FAM240BA0A1B0GVZ2 78 aa10.55□□□□□ -0.72
NUP188-211ENST00000550219 TXNL1O43396 289 aa10.55□□□□□ -0.72
NUP188-211ENST00000550219 GAPDHP04406 335 aaKnown RBP10.55□□□□□ -0.72
NUP188-211ENST00000550219 CT45A6P0DMU7 189 aa10.55□□□□□ -0.72
NUP188-211ENST00000550219 CT45A5P0DMU8 189 aa10.55□□□□□ -0.72
NUP188-211ENST00000550219 CT45A7P0DMV0 189 aa10.55□□□□□ -0.72
NUP188-211ENST00000550219 PGAM2P15259 253 aa10.55□□□□□ -0.72
NUP188-211ENST00000550219 DUTP33316 252 aaKnown RBP10.55□□□□□ -0.72
NUP188-211ENST00000550219 THBS3P49746 956 aa10.55□□□□□ -0.72
NUP188-211ENST00000550219 ZNF66Q6ZN08 573 aa10.55□□□□□ -0.72
NUP188-211ENST00000550219 STPG2Q8N412 459 aa10.55□□□□□ -0.72
NUP188-211ENST00000550219 EAF1Q96JC9 268 aaPredicted RBP10.55□□□□□ -0.72
NUP188-211ENST00000550219 COPZ2Q9P299 210 aa10.55□□□□□ -0.72
NUP188-211ENST00000550219 LINC01548A6NM66 108 aa10.54□□□□□ -0.72
NUP188-211ENST00000550219 M0R1X1 148 aa10.54□□□□□ -0.72
NUP188-211ENST00000550219 PGLYRP1O75594 196 aaPredicted RBP10.54□□□□□ -0.72
NUP188-211ENST00000550219 IGHG2P01859 326 aa10.54□□□□□ -0.72
NUP188-211ENST00000550219 TCRBP04435 133 aa10.54□□□□□ -0.72
NUP188-211ENST00000550219 CD69Q07108 199 aa10.54□□□□□ -0.72
NUP188-211ENST00000550219 LCNL1Q6ZST4 164 aa10.54□□□□□ -0.72
NUP188-211ENST00000550219 NRARPQ7Z6K4 114 aa10.54□□□□□ -0.72
NUP188-211ENST00000550219 TGIF2LXQ8IUE1 241 aa10.54□□□□□ -0.72
NUP188-211ENST00000550219 CMTM1Q8IZ96 169 aa10.54□□□□□ -0.72
NUP188-211ENST00000550219 ZNF383Q8NA42 475 aa10.54□□□□□ -0.72
NUP188-211ENST00000550219 OR5AN1Q8NGI8 311 aa10.54□□□□□ -0.72
NUP188-211ENST00000550219 DDB2Q92466 427 aa10.54□□□□□ -0.72
NUP188-211ENST00000550219 RBMXL1Q96E39 390 aaKnown RBP10.54□□□□□ -0.72
NUP188-211ENST00000550219 ADTRPQ96IZ2 230 aa10.54□□□□□ -0.72
NUP188-211ENST00000550219 HSD17B10Q99714 261 aaKnown RBP10.54□□□□□ -0.72
NUP188-211ENST00000550219 NABP2Q9BQ15 211 aa10.54□□□□□ -0.72
NUP188-211ENST00000550219 MRPL20Q9BYC9 149 aaKnown RBP10.54□□□□□ -0.72
NUP188-211ENST00000550219 SLC2A9Q9NRM0 540 aa10.54□□□□□ -0.72
NUP188-211ENST00000550219 AP4M1O00189 453 aa10.53□□□□□ -0.72
NUP188-211ENST00000550219 PTTG1O95997 202 aa10.53□□□□□ -0.72
NUP188-211ENST00000550219 PI3P19957 117 aa10.53□□□□□ -0.72
NUP188-211ENST00000550219 MYCNOSP40205 109 aa10.53□□□□□ -0.72
NUP188-211ENST00000550219 PIGPP57054 158 aa10.53□□□□□ -0.72
NUP188-211ENST00000550219 LINC00205P59089 165 aa10.53□□□□□ -0.72
NUP188-211ENST00000550219 RPL30P62888 115 aaKnown RBP10.53□□□□□ -0.72
NUP188-211ENST00000550219 EGFEM1PQ0D2K5 195 aa10.53□□□□□ -0.72
NUP188-211ENST00000550219 DEFB136Q30KP8 78 aa10.53□□□□□ -0.72
NUP188-211ENST00000550219 PHLDA2Q53GA4 152 aa10.53□□□□□ -0.72
NUP188-211ENST00000550219 ZNF695Q8IW36 515 aa10.53□□□□□ -0.72
NUP188-211ENST00000550219 COMMD1Q8N668 190 aa10.53□□□□□ -0.72
NUP188-211ENST00000550219 OR2T10Q8NGZ9 312 aa10.53□□□□□ -0.72
NUP188-211ENST00000550219 ENKURQ8TC29 256 aa10.53□□□□□ -0.72
NUP188-211ENST00000550219 TMEM230Q96A57 120 aa10.53□□□□□ -0.72
NUP188-211ENST00000550219 MCRIP2Q9BUT9 160 aaKnown RBP10.53□□□□□ -0.72
NUP188-211ENST00000550219 ZFP57Q9NU63 452 aa10.53□□□□□ -0.72
NUP188-211ENST00000550219 LIN7CQ9NUP9 197 aaKnown RBP10.53□□□□□ -0.72
NUP188-211ENST00000550219 C14orf166Q9Y224 244 aaKnown RBP10.53□□□□□ -0.72
NUP188-211ENST00000550219 DNAH3Q8TD57 4116 aa10.53□□□□□ -0.72
NUP188-211ENST00000550219 LINC00473A8K010 186 aa10.52□□□□□ -0.73
NUP188-211ENST00000550219 H0YJW9 148 aa10.52□□□□□ -0.73
NUP188-211ENST00000550219 MPPED1O15442 326 aa10.52□□□□□ -0.73
NUP188-211ENST00000550219 RPLP1P05386 114 aaKnown RBP10.52□□□□□ -0.73
NUP188-211ENST00000550219 CD1BP29016 333 aa10.52□□□□□ -0.73
NUP188-211ENST00000550219 S100GP29377 79 aa10.52□□□□□ -0.73
NUP188-211ENST00000550219 MECP2P51608 486 aaKnown RBP10.52□□□□□ -0.73
NUP188-211ENST00000550219 BRWD1-AS2P59051 145 aa10.52□□□□□ -0.73
NUP188-211ENST00000550219 TAGLNQ01995 201 aaKnown RBP10.52□□□□□ -0.73
NUP188-211ENST00000550219 DHODHQ02127 395 aa10.52□□□□□ -0.73
NUP188-211ENST00000550219 CXorf66Q5JRM2 361 aaPredicted RBP10.52□□□□□ -0.73
NUP188-211ENST00000550219 SLC25A42Q86VD7 318 aa10.52□□□□□ -0.73
NUP188-211ENST00000550219 Q8N9W7 124 aa10.52□□□□□ -0.73
NUP188-211ENST00000550219 CCDC71LQ8N9Z2 235 aa10.52□□□□□ -0.73
NUP188-211ENST00000550219 DRAXINQ8NBI3 349 aaPredicted RBP10.52□□□□□ -0.73
NUP188-211ENST00000550219 ADAD2Q8NCV1 583 aaKnown RBP10.52□□□□□ -0.73
NUP188-211ENST00000550219 GPHA2Q96T91 129 aa10.52□□□□□ -0.73
NUP188-211ENST00000550219 P2RX4Q99571 388 aa10.52□□□□□ -0.73
NUP188-211ENST00000550219 RASL11BQ9BPW5 248 aa10.52□□□□□ -0.73
NUP188-211ENST00000550219 ALX4Q9H161 411 aaPredicted RBP10.52□□□□□ -0.73
NUP188-211ENST00000550219 C20orf85Q9H1P6 137 aa10.52□□□□□ -0.73
NUP188-211ENST00000550219 FLVCR2Q9UPI3 526 aa10.52□□□□□ -0.73
NUP188-211ENST00000550219 NUBP2Q9Y5Y2 271 aa10.52□□□□□ -0.73
NUP188-211ENST00000550219 CRYM-AS1A6NIL9 109 aa10.51□□□□□ -0.73
NUP188-211ENST00000550219 TNFSF12O43508 249 aa10.51□□□□□ -0.73
NUP188-211ENST00000550219 MOSP00540 346 aa10.51□□□□□ -0.73
NUP188-211ENST00000550219 F2RP25116 425 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms