RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 NAPSAO96009 420 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 CT45A10P0DMU9 189 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 SOX8P57073 446 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 RPL31P62899 125 aaKnown RBP8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 SCGB2A2Q13296 93 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 RND1Q92730 232 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 MISP3Q96FF7 219 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 IMMP1LQ96LU5 166 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 C12orf77C9JDV5 145 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 IGHV2-70P01814 119 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 IGHV2-5P01817 119 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 C1QTNF9P0C862 333 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 TMEM11P17152 192 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 CRYBB3P26998 211 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 HINT1P49773 126 aaPredicted RBP8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 CTAG1AP78358 180 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 SPATA45Q537H7 98 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 MRPL14Q6P1L8 145 aaKnown RBP8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 NHLRC2Q8NBF2 726 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 LEAP2Q969E1 77 aa8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 HEATR1Q9H583 2144 aaKnown RBP8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 ZNF106Q9H2Y7 1883 aaKnown RBP8.66□□□□□ -1.02
SMARCC2-209ENST00000550164 NCOA6Q14686 2063 aaPredicted RBP8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 COX19Q49B96 90 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 MMD2Q8IY49 270 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 PLPPR1Q8TBJ4 325 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 TMEM210A6NLX4 147 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 SCGB2A1O75556 95 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 IL3RAP26951 378 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 CHRNB4P30926 498 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 KIR2DS2P43631 304 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 LCN2P80188 198 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 ZNF124Q15973 351 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 WFDC8Q8IUA0 241 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 RPP25LQ8N5L8 163 aaKnown RBP8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 OR5R1Q8NH85 324 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 TMEM170AQ8WVE7 144 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 TIMM9Q9Y5J7 89 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 TRAV24A0A0B4J272 114 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 UMODP07911 640 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 COX5BP10606 129 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 SRIP30626 198 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 FOXG1P55316 489 aaPredicted RBP8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 C17orf82Q86X59 251 aaPredicted RBP8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 DOLPP1Q86YN1 238 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 MBD3L1Q8WWY6 194 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 WDYHV1Q96HA8 205 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 TXNDC17Q9BRA2 123 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 EGLN1Q9GZT9 426 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 SEBOXQ9HB31 216 aaPredicted RBP8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 ANAPC10Q9UM13 185 aa8.65□□□□□ -1.02
SMARCC2-209ENST00000550164 A0A0G2JRQ6 117 aa8.65□□□□□ -1.03
SMARCC2-209ENST00000550164 SCO2A0A1W2PP80 73 aa8.65□□□□□ -1.03
SMARCC2-209ENST00000550164 ZNF716A6NP11 495 aa8.65□□□□□ -1.03
SMARCC2-209ENST00000550164 RAMP3O60896 148 aa8.65□□□□□ -1.03
SMARCC2-209ENST00000550164 SP1P08047 785 aa8.65□□□□□ -1.03
SMARCC2-209ENST00000550164 IL15RAQ13261 267 aa8.65□□□□□ -1.03
SMARCC2-209ENST00000550164 HES1Q14469 280 aa8.65□□□□□ -1.03
SMARCC2-209ENST00000550164 IBA57Q5T440 356 aaKnown RBP8.65□□□□□ -1.03
SMARCC2-209ENST00000550164 PPP1R32Q7Z5V6 425 aa8.65□□□□□ -1.03
SMARCC2-209ENST00000550164 UBALD2Q8IYN6 164 aa8.65□□□□□ -1.03
SMARCC2-209ENST00000550164 TMEM50AO95807 157 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 OTX1P32242 354 aaPredicted RBP8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 KLF3P57682 345 aaPredicted RBP8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 GABRA6Q16445 453 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 OR4B1Q8NGF8 309 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 TMEM140Q9NV12 185 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 WIPI2Q9Y4P8 454 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 LOC102724200A0A096LPH7 203 aaPredicted RBP8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 ZNF891A8MT65 544 aaPredicted RBP8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 HTR1DP28221 377 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 ZNF137PP52743 207 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 GCSAMLQ5JQS6 135 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 PMS2CLQ68D20 193 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 ZADH2Q8N4Q0 377 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 GMPPAQ96IJ6 420 aaPredicted RBP8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 ADTRPQ96IZ2 230 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 TCF19Q9Y242 345 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 NEURL1O76050 574 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 PLAUP00749 431 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 APELAP0DMC3 54 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 DEFB109BQ30KR1 87 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 FAM90A2PQ658T7 463 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 FA2HQ7L5A8 372 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 OR1B1Q8NGR6 318 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 DCTN5Q9BTE1 182 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 TMEM242Q9NWH2 141 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 OR51B2Q9Y5P1 312 aa8.64□□□□□ -1.03
SMARCC2-209ENST00000550164 PCNX1Q96RV3 2341 aa8.63□□□□□ -1.03
SMARCC2-209ENST00000550164 RRHO14718 337 aa8.63□□□□□ -1.03
SMARCC2-209ENST00000550164 TMPRSS2O15393 492 aa8.63□□□□□ -1.03
SMARCC2-209ENST00000550164 MT-ND6P03923 174 aa8.63□□□□□ -1.03
SMARCC2-209ENST00000550164 GCHFRP30047 84 aa8.63□□□□□ -1.03
SMARCC2-209ENST00000550164 MPV17P39210 176 aa8.63□□□□□ -1.03
SMARCC2-209ENST00000550164 REG1BP48304 166 aa8.63□□□□□ -1.03
SMARCC2-209ENST00000550164 TNFAIP6P98066 277 aaPredicted RBP8.63□□□□□ -1.03
SMARCC2-209ENST00000550164 ZNF324BQ6AW86 544 aaPredicted RBP8.63□□□□□ -1.03
SMARCC2-209ENST00000550164 INO80CQ6PI98 192 aaPredicted RBP8.63□□□□□ -1.03
SMARCC2-209ENST00000550164 PDPNQ86YL7 162 aa8.63□□□□□ -1.03
SMARCC2-209ENST00000550164 KLF14Q8TD94 323 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms