RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 TPPP2P59282 170 aa13.39□□□□□ -0.27
CHMP1A-208ENST00000550102 ZNF616Q08AN1 781 aa13.39□□□□□ -0.27
CHMP1A-208ENST00000550102 PRSS8Q16651 343 aa13.39□□□□□ -0.27
CHMP1A-208ENST00000550102 TMEM17Q86X19 198 aa13.39□□□□□ -0.27
CHMP1A-208ENST00000550102 ZBTB34Q8NCN2 500 aa13.39□□□□□ -0.27
CHMP1A-208ENST00000550102 OR11H1Q8NG94 326 aa13.39□□□□□ -0.27
CHMP1A-208ENST00000550102 GIMAP1Q8WWP7 306 aa13.39□□□□□ -0.27
CHMP1A-208ENST00000550102 BORCS5Q969J3 196 aa13.39□□□□□ -0.27
CHMP1A-208ENST00000550102 OR5B12Q96R08 314 aa13.39□□□□□ -0.27
CHMP1A-208ENST00000550102 SLA2Q9H6Q3 261 aa13.39□□□□□ -0.27
CHMP1A-208ENST00000550102 SCPEP1Q9HB40 452 aa13.39□□□□□ -0.27
CHMP1A-208ENST00000550102 CCL28Q9NRJ3 127 aa13.39□□□□□ -0.27
CHMP1A-208ENST00000550102 AURKAIP1Q9NWT8 199 aaPredicted RBP13.39□□□□□ -0.27
CHMP1A-208ENST00000550102 DNAH3Q8TD57 4116 aa13.38□□□□□ -0.27
CHMP1A-208ENST00000550102 H3BUA1 57 aa13.38□□□□□ -0.27
CHMP1A-208ENST00000550102 ZNF182P17025 639 aaPredicted RBP13.38□□□□□ -0.27
CHMP1A-208ENST00000550102 CATR1Q13166 79 aa13.38□□□□□ -0.27
CHMP1A-208ENST00000550102 DYRK1AQ13627 763 aa13.38□□□□□ -0.27
CHMP1A-208ENST00000550102 TNXAQ16473 311 aa13.38□□□□□ -0.27
CHMP1A-208ENST00000550102 SNX29P2Q8IUI4 249 aa13.38□□□□□ -0.27
CHMP1A-208ENST00000550102 MFSD4AQ8N468 514 aa13.38□□□□□ -0.27
CHMP1A-208ENST00000550102 POC5Q8NA72 575 aa13.38□□□□□ -0.27
CHMP1A-208ENST00000550102 GPX8Q8TED1 209 aa13.38□□□□□ -0.27
CHMP1A-208ENST00000550102 TMEM68Q96MH6 324 aa13.38□□□□□ -0.27
CHMP1A-208ENST00000550102 PHB2Q99623 299 aa13.38□□□□□ -0.27
CHMP1A-208ENST00000550102 ADAM30Q9UKF2 790 aa13.38□□□□□ -0.27
CHMP1A-208ENST00000550102 FAM25AB3EWG3 89 aa13.37□□□□□ -0.27
CHMP1A-208ENST00000550102 FAM25CB3EWG5 89 aa13.37□□□□□ -0.27
CHMP1A-208ENST00000550102 FAM25GB3EWG6 89 aa13.37□□□□□ -0.27
CHMP1A-208ENST00000550102 TNFSF12O43508 249 aa13.37□□□□□ -0.27
CHMP1A-208ENST00000550102 ACTL6BO94805 426 aa13.37□□□□□ -0.27
CHMP1A-208ENST00000550102 TRGV3P03979 118 aa13.37□□□□□ -0.27
CHMP1A-208ENST00000550102 LGALS1P09382 135 aaKnown RBP13.37□□□□□ -0.27
CHMP1A-208ENST00000550102 RCVRNP35243 200 aa13.37□□□□□ -0.27
CHMP1A-208ENST00000550102 MRGPRG-AS1Q2M3A8 158 aa13.37□□□□□ -0.27
CHMP1A-208ENST00000550102 MMD2Q8IY49 270 aa13.37□□□□□ -0.27
CHMP1A-208ENST00000550102 OR1N2Q8NGR9 330 aa13.37□□□□□ -0.27
CHMP1A-208ENST00000550102 VSTM2AQ8TAG5 236 aa13.37□□□□□ -0.27
CHMP1A-208ENST00000550102 MS4A10Q96PG2 267 aa13.37□□□□□ -0.27
CHMP1A-208ENST00000550102 GPHA2Q96T91 129 aa13.37□□□□□ -0.27
CHMP1A-208ENST00000550102 ZNF430Q9H8G1 570 aaPredicted RBP13.37□□□□□ -0.27
CHMP1A-208ENST00000550102 KBTBD11O94819 623 aa13.36□□□□□ -0.27
CHMP1A-208ENST00000550102 PMP2P02689 132 aa13.36□□□□□ -0.27
CHMP1A-208ENST00000550102 HOXD3P31249 432 aaPredicted RBP13.36□□□□□ -0.27
CHMP1A-208ENST00000550102 HRH1P35367 487 aa13.36□□□□□ -0.27
CHMP1A-208ENST00000550102 RFX2P48378 723 aa13.36□□□□□ -0.27
CHMP1A-208ENST00000550102 EGFEM1PQ0D2K5 195 aa13.36□□□□□ -0.27
CHMP1A-208ENST00000550102 MRAPQ8TCY5 172 aa13.36□□□□□ -0.27
CHMP1A-208ENST00000550102 RAB2BQ8WUD1 216 aa13.36□□□□□ -0.27
CHMP1A-208ENST00000550102 SRSF12Q8WXF0 261 aaKnown RBP13.36□□□□□ -0.27
CHMP1A-208ENST00000550102 MOB3AQ96BX8 217 aa13.36□□□□□ -0.27
CHMP1A-208ENST00000550102 ZNF2Q9BSG1 426 aaPredicted RBP13.36□□□□□ -0.27
CHMP1A-208ENST00000550102 ZNF355PQ9NSJ1 428 aa13.36□□□□□ -0.27
CHMP1A-208ENST00000550102 SULT1C2O00338 296 aa13.35□□□□□ -0.27
CHMP1A-208ENST00000550102 MPPED1O15442 326 aa13.35□□□□□ -0.27
CHMP1A-208ENST00000550102 RBFOX2O43251 390 aaKnown RBP eCLIP13.35□□□□□ -0.274e-7■□□□□ 8.3
CHMP1A-208ENST00000550102 HRASP01112 189 aa13.35□□□□□ -0.27
CHMP1A-208ENST00000550102 ASPHD1Q5U4P2 390 aa13.35□□□□□ -0.27
CHMP1A-208ENST00000550102 DHRS11Q6UWP2 260 aa13.35□□□□□ -0.27
CHMP1A-208ENST00000550102 ZNF818PQ6ZRF7 136 aa13.35□□□□□ -0.27
CHMP1A-208ENST00000550102 CLVS1Q8IUQ0 354 aaPredicted RBP13.35□□□□□ -0.27
CHMP1A-208ENST00000550102 VKORC1L1Q8N0U8 176 aa13.35□□□□□ -0.27
CHMP1A-208ENST00000550102 SPAG16Q8N0X2 631 aa13.35□□□□□ -0.27
CHMP1A-208ENST00000550102 OR5T1Q8NG75 326 aa13.35□□□□□ -0.27
CHMP1A-208ENST00000550102 RHOVQ96L33 236 aa13.35□□□□□ -0.27
CHMP1A-208ENST00000550102 SPIN2AQ99865 258 aa13.35□□□□□ -0.27
CHMP1A-208ENST00000550102 SPIN2BQ9BPZ2 258 aa13.35□□□□□ -0.27
CHMP1A-208ENST00000550102 BCL7BQ9BQE9 202 aa13.35□□□□□ -0.27
CHMP1A-208ENST00000550102 ALX4Q9H161 411 aaPredicted RBP13.35□□□□□ -0.27
CHMP1A-208ENST00000550102 COA4Q9NYJ1 87 aa13.35□□□□□ -0.27
CHMP1A-208ENST00000550102 MSGN1A6NI15 193 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 SEC14L6B5MCN3 397 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 RAMP3O60896 148 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 NOL3O60936 208 aaKnown RBP13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 OR2A4O95047 310 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 IGHV3-11P01762 117 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 HLA-DMAP28067 261 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 BRWD1-AS2P59051 145 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 SPCS2Q15005 226 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 C9orf66Q5T8R8 295 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 AADACL3Q5VUY0 350 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 OR6F1Q8NGZ6 308 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 OR51H1Q8NH63 302 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 TMEM167AQ8TBQ9 72 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 OR2A7Q96R45 310 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 AIFM2Q9BRQ8 373 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 FXYD6Q9H0Q3 95 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 EXTL2Q9UBQ6 330 aa13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 ZMAT5Q9UDW3 170 aaKnown RBP13.34□□□□□ -0.27
CHMP1A-208ENST00000550102 A0A0G2JLM5 398 aa13.33□□□□□ -0.28
CHMP1A-208ENST00000550102 C13orf42A0A1B0GVH6 325 aa13.33□□□□□ -0.28
CHMP1A-208ENST00000550102 LINC01619G3V211 115 aa13.33□□□□□ -0.28
CHMP1A-208ENST00000550102 BRI3O95415 125 aa13.33□□□□□ -0.28
CHMP1A-208ENST00000550102 OR9G9P0C7N8 305 aa13.33□□□□□ -0.28
CHMP1A-208ENST00000550102 APELAP0DMC3 54 aa13.33□□□□□ -0.28
CHMP1A-208ENST00000550102 TMBIM6P55061 237 aa13.33□□□□□ -0.28
CHMP1A-208ENST00000550102 KRTAP10-11P60412 298 aa13.33□□□□□ -0.28
CHMP1A-208ENST00000550102 C10orf55Q5SWW7 151 aa13.33□□□□□ -0.28
CHMP1A-208ENST00000550102 LYSMD2Q8IV50 215 aa13.33□□□□□ -0.28
CHMP1A-208ENST00000550102 PUSL1Q8N0Z8 303 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms