RNA–Protein interactions for RNA: ENST00000549064.1

LIMA1-204, Transcript of LIM domain and actin binding 1, humanhuman

TSL 2

Gene LIMA1, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-204ENST00000549064 CNN2Q99439 309 aaKnown RBP4.76□□□□□ -1.65
LIMA1-204ENST00000549064 EFCAB1Q9HAE3 211 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 ADGRL4Q9HBW9 690 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 NDUFA13Q9P0J0 144 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 UBR4Q5T4S7 5183 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 A0A0G2JLM5 398 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 C2orf70A6NJV1 201 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 C16orf90A8MZG2 172 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 E5RGE8 158 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 ZNF670-ZNF695F2Z2N8 137 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 M0R129 80 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 NDUFAB1O14561 156 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 DEFB4AO15263 64 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 AIREO43918 545 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 ATP6V1G1O75348 118 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 KRT8P05787 483 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 DBTP11182 482 aaKnown RBP4.75□□□□□ -1.65
LIMA1-204ENST00000549064 FOLR2P14207 255 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 FCGR2BP31994 310 aaPredicted RBP4.75□□□□□ -1.65
LIMA1-204ENST00000549064 DUTP33316 252 aaKnown RBP4.75□□□□□ -1.65
LIMA1-204ENST00000549064 KCNJ3P48549 501 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 ADARB1P78563 741 aaKnown RBP4.75□□□□□ -1.65
LIMA1-204ENST00000549064 RPL24P83731 157 aaKnown RBP4.75□□□□□ -1.65
LIMA1-204ENST00000549064 CDK5Q00535 292 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 Q3ZCU0 254 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 LPCAT4Q643R3 524 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 ZNF554Q86TJ5 538 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 CCDC54Q8NEL0 328 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 C11orf45Q8TAV5 145 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 C10orf35Q96D05 121 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 CYYR1Q96J86 154 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 C17orf77Q96MU5 243 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 REEP1Q9H902 201 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 RHOFQ9HBH0 211 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 TVP23BQ9NYZ1 205 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 NSG2Q9Y328 171 aa4.75□□□□□ -1.65
LIMA1-204ENST00000549064 TRAV18A0A075B6X5 111 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 SAA2-SAA4A0A096LPE2 208 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 H3BUA1 57 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 AIPO00170 330 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 ORC5O43913 435 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 PRKYO43930 277 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 OR7C1O76099 320 aaPredicted RBP4.74□□□□□ -1.65
LIMA1-204ENST00000549064 TOMM40O96008 361 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 HBZP02008 142 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 SAA2P0DJI9 122 aaPredicted RBP4.74□□□□□ -1.65
LIMA1-204ENST00000549064 APELAP0DMC3 54 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 RPL35AP18077 110 aaKnown RBP4.74□□□□□ -1.65
LIMA1-204ENST00000549064 ATP6V1B2P21281 511 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 CNN1P51911 297 aaKnown RBP4.74□□□□□ -1.65
LIMA1-204ENST00000549064 MFAP2P55001 183 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 APOC4P55056 127 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 TCTAP57738 103 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 FXYD3Q14802 87 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 MORN2Q502X0 79 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 ELP2Q6IA86 826 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 OR2T5Q6IEZ7 315 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 ZNF562Q6V9R5 426 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 ZNF833PQ6ZTB9 187 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 OR51A4Q8NGJ6 313 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 OR2T29Q8NH02 315 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 OR4K15Q8NH41 348 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 OR4A16Q8NH70 328 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 NEK7Q8TDX7 302 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 GIPC3Q8TF64 312 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 NTN5Q8WTR8 489 aaPredicted RBP4.74□□□□□ -1.65
LIMA1-204ENST00000549064 GGHQ92820 318 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 ATP6V1G3Q96LB4 118 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 ALKBH7Q9BT30 221 aaPredicted RBP4.74□□□□□ -1.65
LIMA1-204ENST00000549064 MFFQ9GZY8 342 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 GPN1Q9HCN4 374 aaPredicted RBP4.74□□□□□ -1.65
LIMA1-204ENST00000549064 FGFR1OP2Q9NVK5 253 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 CLN6Q9NWW5 311 aa4.74□□□□□ -1.65
LIMA1-204ENST00000549064 METTL1Q9UBP6 276 aaKnown RBP4.74□□□□□ -1.65
LIMA1-204ENST00000549064 A0A1W2PQL4 384 aaPredicted RBP4.73□□□□□ -1.65
LIMA1-204ENST00000549064 METTL15A6NJ78 407 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 PPP5D1E7EU14 171 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 GABRPO00591 440 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 HLA-AP01891 365 aaKnown RBP4.73□□□□□ -1.65
LIMA1-204ENST00000549064 MT-ND2P03891 347 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 MT-ND4P03905 459 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 UBCP0CG48 685 aaKnown RBP4.73□□□□□ -1.65
LIMA1-204ENST00000549064 HSD17B1P14061 328 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 AADACP22760 399 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 PPP1CCP36873 323 aaKnown RBP4.73□□□□□ -1.65
LIMA1-204ENST00000549064 PSG5Q15238 335 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 KISS1Q15726 138 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 TP53I3Q53FA7 332 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 ATAD3CQ5T2N8 411 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 SYT6Q5T7P8 510 aaPredicted RBP4.73□□□□□ -1.65
LIMA1-204ENST00000549064 ZNF691Q5VV52 312 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 ZNF57Q68EA5 555 aaPredicted RBP4.73□□□□□ -1.65
LIMA1-204ENST00000549064 ZNF497Q6ZNH5 498 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 GPR141Q7Z602 305 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 HS3ST5Q8IZT8 346 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 LRTM2Q8N967 370 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 KCNG3Q8TAE7 436 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 TNFAIP8L1Q8WVP5 186 aa4.73□□□□□ -1.65
LIMA1-204ENST00000549064 MRPS24Q96EL2 167 aaKnown RBP4.73□□□□□ -1.65
LIMA1-204ENST00000549064 KRTAP4-12Q9BQ66 201 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms