RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 PSPNO60542 156 aa11.46□□□□□ -0.57
HDAC7-228ENST00000548938 CLDN14O95500 239 aa11.46□□□□□ -0.57
HDAC7-228ENST00000548938 KITLGP21583 273 aa11.46□□□□□ -0.57
HDAC7-228ENST00000548938 YPEL3P61236 119 aaPredicted RBP11.46□□□□□ -0.57
HDAC7-228ENST00000548938 CATR1Q13166 79 aa11.46□□□□□ -0.57
HDAC7-228ENST00000548938 LOXL2Q9Y4K0 774 aa11.46□□□□□ -0.57
HDAC7-228ENST00000548938 COL27A1Q8IZC6 1860 aaPredicted RBP11.46□□□□□ -0.57
HDAC7-228ENST00000548938 A0A1W2PPV4 95 aa11.46□□□□□ -0.58
HDAC7-228ENST00000548938 SERF1AO75920 110 aa11.46□□□□□ -0.58
HDAC7-228ENST00000548938 ARL14EPLP0DKL9 152 aa11.46□□□□□ -0.58
HDAC7-228ENST00000548938 TEX43Q6ZNM6 134 aa11.46□□□□□ -0.58
HDAC7-228ENST00000548938 RYDENQ9NUL5 291 aaKnown RBP11.46□□□□□ -0.58
HDAC7-228ENST00000548938 PAM16Q9Y3D7 125 aa11.46□□□□□ -0.58
HDAC7-228ENST00000548938 RAB29O14966 203 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 NEURL1O76050 574 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 CD1BP29016 333 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 TIMP3P35625 211 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 ZNF146Q15072 292 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 C3AR1Q16581 482 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 DCAF12Q5T6F0 453 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 ZBTB34Q8NCN2 500 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 NBEAQ8NFP9 2946 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 GALMQ96C23 342 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 C20orf144Q9BQM9 153 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 HSPB9Q9BQS6 159 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 HES7Q9BYE0 225 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 KCNIP1Q9NZI2 227 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 GOLT1BQ9Y3E0 138 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 FAM166BA8MTA8 275 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 F2Z2F3 143 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 M0QZK8 103 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 SH2D1BO14796 132 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 TNFSF13O75888 250 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 TPPP2P59282 170 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 SELENOTP62341 195 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 TRIP6Q15654 476 aaKnown RBP11.45□□□□□ -0.58
HDAC7-228ENST00000548938 Q8IYB0 196 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 RAB1CQ92928 201 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 QTRT1Q9BXR0 403 aaKnown RBP11.45□□□□□ -0.58
HDAC7-228ENST00000548938 ZNF703Q9H7S9 590 aaPredicted RBP11.45□□□□□ -0.58
HDAC7-228ENST00000548938 BOKQ9UMX3 212 aaPredicted RBP11.45□□□□□ -0.58
HDAC7-228ENST00000548938 POLDIP2Q9Y2S7 368 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 CACNA1DQ01668 2161 aa11.45□□□□□ -0.58
HDAC7-228ENST00000548938 LINC00473A8K010 186 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 RRHO14718 337 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 HBZP02008 142 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 TFF1P04155 84 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 OR10G8Q8NGN5 311 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 OCC1Q8TAD7 63 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 MIEN1Q9BRT3 115 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 PCSK5Q92824 1860 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 DNAJC13O75165 2243 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 DOCK10Q96BY6 2186 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 TMEM30CPA0ZSE6 113 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 SLC17A3O00476 420 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 HAND1O96004 215 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 COL8A2P25067 703 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 TNFSF10P50591 281 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 BATFQ16520 125 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 HLA-DRB5Q30154 266 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 ALKBH6Q3KRA9 238 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 MDP1Q86V88 176 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 VN1R17PQ8TDU5 208 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 MRPL18Q9H0U6 180 aaKnown RBP11.44□□□□□ -0.58
HDAC7-228ENST00000548938 C12orf49Q9H741 205 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 GRPP07492 148 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 FRMD6-AS1P0C7T7 363 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 CRISP2P16562 243 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 ZNF90Q03938 601 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 AESQ08117 197 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 TMEM249Q2WGJ8 235 aa11.44□□□□□ -0.58
HDAC7-228ENST00000548938 TIPARPQ7Z3E1 657 aaKnown RBP11.44□□□□□ -0.58
HDAC7-228ENST00000548938 IGHV3-43A0A0B4J1X8 118 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 IGHV3-43DP0DP04 118 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 TMEM183BQ1AE95 376 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 OR2M7Q8NG81 312 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 MRGPRDQ8TDS7 321 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 LPAR2Q9HBW0 351 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 GP6Q9HCN6 339 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 RNF114Q9Y508 228 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 K7EN84 100 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 WNT9BO14905 357 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 OR9G9P0C7N8 305 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 BRS3P32247 399 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 MAGEA5P43359 124 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 PAFAH1B2P68402 229 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 PSG7Q13046 419 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 NINJ1Q92982 152 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 VAMP8Q9BV40 100 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 OR2J1Q9GZK6 312 aa11.43□□□□□ -0.58
HDAC7-228ENST00000548938 YTHDF2Q9Y5A9 579 aaKnown RBP11.43□□□□□ -0.58
HDAC7-228ENST00000548938 EP300Q09472 2414 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-228ENST00000548938 A0A1W2PNU3 283 aaPredicted RBP11.42□□□□□ -0.58
HDAC7-228ENST00000548938 CELA3BP08861 270 aa11.42□□□□□ -0.58
HDAC7-228ENST00000548938 STAG3L2P0CL84 134 aa11.42□□□□□ -0.58
HDAC7-228ENST00000548938 STAG3L3P0CL85 134 aa11.42□□□□□ -0.58
HDAC7-228ENST00000548938 MIC13Q5XKP0 118 aa11.42□□□□□ -0.58
HDAC7-228ENST00000548938 MRPL52Q86TS9 123 aaKnown RBP11.42□□□□□ -0.58
HDAC7-228ENST00000548938 TAAR6Q96RI8 345 aa11.42□□□□□ -0.58
HDAC7-228ENST00000548938 DEFB108AA8MXU0 73 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms