RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 ETAA1Q9NY74 926 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 SCP2D1Q9UJQ7 156 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 ST3GAL6Q9Y274 331 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 FBXO7Q9Y3I1 522 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 TMEM235A6NFC5 223 aa10.34□□□□□ -0.75
CDX2-202ENST00000548877 DISC1C4P0D8 188 aa10.34□□□□□ -0.75
CDX2-202ENST00000548877 NDUFB6O95139 128 aa10.34□□□□□ -0.75
CDX2-202ENST00000548877 RAB3DO95716 219 aa10.34□□□□□ -0.75
CDX2-202ENST00000548877 RBM11P57052 281 aaKnown RBP10.34□□□□□ -0.75
CDX2-202ENST00000548877 NDPQ00604 133 aa10.34□□□□□ -0.75
CDX2-202ENST00000548877 MPV17LQ2QL34 196 aa10.34□□□□□ -0.75
CDX2-202ENST00000548877 MOGAT2Q3SYC2 334 aa10.34□□□□□ -0.75
CDX2-202ENST00000548877 GAPTQ8N292 157 aa10.34□□□□□ -0.75
CDX2-202ENST00000548877 UBALD1Q8TB05 177 aa10.34□□□□□ -0.75
CDX2-202ENST00000548877 Q96M66 194 aa10.34□□□□□ -0.75
CDX2-202ENST00000548877 SLC25A21Q9BQT8 299 aaPredicted RBP10.34□□□□□ -0.75
CDX2-202ENST00000548877 BANF2Q9H503 90 aa10.34□□□□□ -0.75
CDX2-202ENST00000548877 HSF4Q9ULV5 492 aa10.34□□□□□ -0.75
CDX2-202ENST00000548877 A0A1W2PN81 502 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 C12orf77C9JDV5 145 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 H0Y980 276 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 MFNGO00587 321 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 CCNKO75909 580 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 OR7C1O76099 320 aaPredicted RBP10.33□□□□□ -0.76
CDX2-202ENST00000548877 HTR3BO95264 441 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 CD74P04233 296 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 EGR2P11161 476 aaPredicted RBP10.33□□□□□ -0.76
CDX2-202ENST00000548877 GNB3P16520 340 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 CNTFRP26992 372 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 CHRNA7P36544 502 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 MRPS15P82914 257 aaKnown RBP10.33□□□□□ -0.76
CDX2-202ENST00000548877 ARFRP1Q13795 201 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 RNASE10Q5GAN6 216 aaKnown RBP10.33□□□□□ -0.76
CDX2-202ENST00000548877 HAPLN4Q86UW8 402 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 OR4C16Q8NGL9 310 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 OR10K1Q8NGX5 313 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 CCDC107Q8WV48 283 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 LINC00476Q8WZB0 136 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 PRRT1Q99946 306 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 NABP2Q9BQ15 211 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 ZNF251Q9BRH9 671 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 C20orf85Q9H1P6 137 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 HIPK2Q9H2X6 1198 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 GPN1Q9HCN4 374 aaPredicted RBP10.33□□□□□ -0.76
CDX2-202ENST00000548877 ALG5Q9Y673 324 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 KMT2AQ03164 3969 aa10.33□□□□□ -0.76
CDX2-202ENST00000548877 C7orf66A4D0T2 115 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 GEMIN2O14893 280 aaKnown RBP10.32□□□□□ -0.76
CDX2-202ENST00000548877 SOCS1O15524 211 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 SPINT2O43291 252 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 RGS11O94810 467 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 PTHLHP12272 177 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 NAT1P18440 290 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 CCR6P51684 374 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 TAS2R46P59540 309 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 TMEM267Q0VDI3 215 aaPredicted RBP10.32□□□□□ -0.76
CDX2-202ENST00000548877 MORN2Q502X0 79 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 AKIRIN2Q53H80 203 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 LY6G6FQ5SQ64 297 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 IL34Q6ZMJ4 242 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 ODF3L1Q8IXM7 274 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 ARHGAP5-AS1Q96IT6 56 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 SLA2Q9H6Q3 261 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 SPACA1Q9HBV2 294 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 PLEKHJ1Q9NW61 149 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 SLC2A8Q9NY64 477 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 KIAA1456Q9P272 454 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 GNG12Q9UBI6 72 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 ZNF221Q9UK13 617 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 ANAPC10Q9UM13 185 aa10.32□□□□□ -0.76
CDX2-202ENST00000548877 PCLOQ9Y6V0 5065 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 TRAV6A0A075B6T7 132 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 A0A0A6YYD4 124 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 FOXI3A8MTJ6 420 aaPredicted RBP10.31□□□□□ -0.76
CDX2-202ENST00000548877 HBZP02008 142 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 CD3DP04234 171 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 IL5P05113 134 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 ZP3P21754 424 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 MECP2P51608 486 aaKnown RBP10.31□□□□□ -0.76
CDX2-202ENST00000548877 TMEM50BP56557 158 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 RRAS2P62070 204 aaPredicted RBP10.31□□□□□ -0.76
CDX2-202ENST00000548877 CX3CL1P78423 397 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 KLF5Q13887 457 aaPredicted RBP10.31□□□□□ -0.76
CDX2-202ENST00000548877 ECSCRQ19T08 205 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 C6orf183Q5T699 404 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 TRAT1Q6PIZ9 186 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 TMEM17Q86X19 198 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 SCGB3A2Q96PL1 93 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 NICN1Q9BSH3 213 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 PECRQ9BY49 303 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 MED28Q9H204 178 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 TUBA4BQ9H853 241 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 SIGLEC8Q9NYZ4 499 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 RCC2Q9P258 522 aaKnown RBP10.31□□□□□ -0.76
CDX2-202ENST00000548877 RNF150Q9ULK6 438 aa10.31□□□□□ -0.76
CDX2-202ENST00000548877 A0A1W2PP11 408 aa10.3□□□□□ -0.76
CDX2-202ENST00000548877 SNRPGP15A8MWD9 76 aa10.3□□□□□ -0.76
CDX2-202ENST00000548877 PDCD6O75340 191 aa10.3□□□□□ -0.76
CDX2-202ENST00000548877 IGHV3-11P01762 117 aa10.3□□□□□ -0.76
CDX2-202ENST00000548877 DTYMKP23919 212 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms