RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 IGHV2-70P01814 119 aa17.12■□□□□ 0.33
RITA1-201ENST00000548278 SPCS3P61009 180 aa17.12■□□□□ 0.33
RITA1-201ENST00000548278 PDLIM3Q53GG5 364 aaPredicted RBP17.12■□□□□ 0.33
RITA1-201ENST00000548278 SCGB1C1Q8TD33 95 aa17.12■□□□□ 0.33
RITA1-201ENST00000548278 PARD6GQ9BYG4 376 aaPredicted RBP17.12■□□□□ 0.33
RITA1-201ENST00000548278 CBLN4Q9NTU7 201 aa17.12■□□□□ 0.33
RITA1-201ENST00000548278 IFNA17P01571 189 aa17.11■□□□□ 0.33
RITA1-201ENST00000548278 UQCRFS1P47985 274 aa17.11■□□□□ 0.33
RITA1-201ENST00000548278 C4orf17Q53FE4 359 aa17.11■□□□□ 0.33
RITA1-201ENST00000548278 RHOVQ96L33 236 aa17.11■□□□□ 0.33
RITA1-201ENST00000548278 SCRT1Q9BWW7 348 aa17.11■□□□□ 0.33
RITA1-201ENST00000548278 TET2Q6N021 2002 aaPredicted RBP17.11■□□□□ 0.33
RITA1-201ENST00000548278 OR8U8P0C7N1 319 aa17.11■□□□□ 0.33
RITA1-201ENST00000548278 DVL1P1P54792 670 aaPredicted RBP17.11■□□□□ 0.33
RITA1-201ENST00000548278 POU2AF1Q16633 256 aa17.11■□□□□ 0.33
RITA1-201ENST00000548278 C11orf71Q6IPW1 123 aa17.11■□□□□ 0.33
RITA1-201ENST00000548278 ATRAIDQ6UW56 229 aa17.11■□□□□ 0.33
RITA1-201ENST00000548278 C8orf31Q8N9H6 132 aa17.11■□□□□ 0.33
RITA1-201ENST00000548278 ZNF596Q8TC21 504 aa17.11■□□□□ 0.33
RITA1-201ENST00000548278 RAB39BQ96DA2 213 aa17.11■□□□□ 0.33
RITA1-201ENST00000548278 RSG1Q9BU20 258 aa17.11■□□□□ 0.33
RITA1-201ENST00000548278 FBXO7Q9Y3I1 522 aa17.11■□□□□ 0.33
RITA1-201ENST00000548278 TRBV23-1A0A0A0MS06 115 aa17.1■□□□□ 0.33
RITA1-201ENST00000548278 DEFA5Q01523 94 aa17.1■□□□□ 0.33
RITA1-201ENST00000548278 AKR1C8PQ5T2L2 129 aa17.1■□□□□ 0.33
RITA1-201ENST00000548278 OR4A47Q6IF82 309 aa17.1■□□□□ 0.33
RITA1-201ENST00000548278 ZNF429Q86V71 674 aa17.1■□□□□ 0.33
RITA1-201ENST00000548278 WDR61Q9GZS3 305 aaKnown RBP17.1■□□□□ 0.33
RITA1-201ENST00000548278 RAB1BQ9H0U4 201 aa17.1■□□□□ 0.33
RITA1-201ENST00000548278 LOC105371267A0A1B0GV96 52 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 FAM157AC9JC47 383 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 C9JQL5 133 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 GNLYP22749 145 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 ZNF841Q6ZN19 808 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 C11orf42Q8N5U0 333 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 LINC00311Q8N616 119 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 ITLN2Q8WWU7 325 aaPredicted RBP17.09■□□□□ 0.33
RITA1-201ENST00000548278 RBMXL1Q96E39 390 aaKnown RBP17.09■□□□□ 0.33
RITA1-201ENST00000548278 PSMG3Q9BT73 122 aaPredicted RBP17.09■□□□□ 0.33
RITA1-201ENST00000548278 RALYQ9UKM9 306 aaKnown RBP17.09■□□□□ 0.33
RITA1-201ENST00000548278 CARHSP1Q9Y2V2 147 aaKnown RBP17.09■□□□□ 0.33
RITA1-201ENST00000548278 A0A087X0M5 115 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 A0A1B0GX30 115 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 C15orf62A8K5M9 175 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 LY86O95711 162 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 SOD3P08294 240 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 M6PRP20645 277 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 ATP6V1FQ16864 119 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 DPPA3Q6W0C5 159 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 SUN5Q8TC36 379 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 SLC35D1Q9NTN3 355 aa17.09■□□□□ 0.33
RITA1-201ENST00000548278 C15orf61A6NNL5 157 aa17.08■□□□□ 0.33
RITA1-201ENST00000548278 F8W036 122 aa17.08■□□□□ 0.33
RITA1-201ENST00000548278 J3QR06 171 aa17.08■□□□□ 0.33
RITA1-201ENST00000548278 HRASP01112 189 aa17.08■□□□□ 0.33
RITA1-201ENST00000548278 IGKV1-16P04430 117 aa17.08■□□□□ 0.33
RITA1-201ENST00000548278 ARG1P05089 322 aa17.08■□□□□ 0.33
RITA1-201ENST00000548278 VDAC2P45880 294 aaPredicted RBP17.08■□□□□ 0.33
RITA1-201ENST00000548278 RTL8BQ17RB0 113 aa17.08■□□□□ 0.33
RITA1-201ENST00000548278 SP5Q6BEB4 398 aaPredicted RBP17.08■□□□□ 0.33
RITA1-201ENST00000548278 DHRS7BQ6IAN0 325 aaPredicted RBP17.08■□□□□ 0.33
RITA1-201ENST00000548278 SPSB3Q6PJ21 355 aa17.08■□□□□ 0.33
RITA1-201ENST00000548278 SEC11CQ9BY50 192 aa17.08■□□□□ 0.33
RITA1-201ENST00000548278 MRPL20Q9BYC9 149 aaKnown RBP17.08■□□□□ 0.33
RITA1-201ENST00000548278 UBE2L5PA0A1B0GUS4 154 aa17.08■□□□□ 0.32
RITA1-201ENST00000548278 GNB2P62879 340 aa17.08■□□□□ 0.32
RITA1-201ENST00000548278 OR10P1Q8NGE3 313 aa17.08■□□□□ 0.32
RITA1-201ENST00000548278 OR13D1Q8NGV5 346 aa17.08■□□□□ 0.32
RITA1-201ENST00000548278 TAF15Q92804 592 aaKnown RBP eCLIP17.08■□□□□ 0.32
RITA1-201ENST00000548278 PINX1Q96BK5 328 aaKnown RBP17.08■□□□□ 0.32
RITA1-201ENST00000548278 TMEM147Q9BVK8 224 aa17.08■□□□□ 0.32
RITA1-201ENST00000548278 HIPK2Q9H2X6 1198 aa17.08■□□□□ 0.32
RITA1-201ENST00000548278 TMEM14BQ9NUH8 114 aa17.08■□□□□ 0.32
RITA1-201ENST00000548278 MALRD1Q5VYJ5 2156 aa17.07■□□□□ 0.32
RITA1-201ENST00000548278 IL6RP08887 468 aaPredicted RBP17.07■□□□□ 0.32
RITA1-201ENST00000548278 IGHV1-8P0DP01 117 aa17.07■□□□□ 0.32
RITA1-201ENST00000548278 RPS16P62249 146 aaKnown RBP17.07■□□□□ 0.32
RITA1-201ENST00000548278 GUK1Q16774 197 aa17.07■□□□□ 0.32
RITA1-201ENST00000548278 AVPI1Q5T686 147 aa17.07■□□□□ 0.32
RITA1-201ENST00000548278 LFNGQ8NES3 379 aa17.07■□□□□ 0.32
RITA1-201ENST00000548278 TCF19Q9Y242 345 aa17.07■□□□□ 0.32
RITA1-201ENST00000548278 FOXA2Q9Y261 457 aaPredicted RBP17.07■□□□□ 0.32
RITA1-201ENST00000548278 TMA7Q9Y2S6 64 aaKnown RBP17.07■□□□□ 0.32
RITA1-201ENST00000548278 HRNRQ86YZ3 2850 aaPredicted RBP17.07■□□□□ 0.32
RITA1-201ENST00000548278 LRBAP50851 2863 aa17.06■□□□□ 0.32
RITA1-201ENST00000548278 H2AFB1P0C5Y9 115 aa17.06■□□□□ 0.32
RITA1-201ENST00000548278 SFTA3P0C7M3 94 aa17.06■□□□□ 0.32
RITA1-201ENST00000548278 AGAP20933 346 aa17.06■□□□□ 0.32
RITA1-201ENST00000548278 BTN1A1Q13410 526 aa17.06■□□□□ 0.32
RITA1-201ENST00000548278 GUCA2BQ16661 112 aa17.06■□□□□ 0.32
RITA1-201ENST00000548278 OR10X1Q8NGY0 326 aa17.06■□□□□ 0.32
RITA1-201ENST00000548278 A0A1B0GV50 99 aa17.06■□□□□ 0.32
RITA1-201ENST00000548278 SRRM4A7MD48 611 aaKnown RBP17.06■□□□□ 0.32
RITA1-201ENST00000548278 GPR37O15354 613 aa17.06■□□□□ 0.32
RITA1-201ENST00000548278 LY6HO94772 140 aa17.06■□□□□ 0.32
RITA1-201ENST00000548278 CCL20P78556 96 aa17.06■□□□□ 0.32
RITA1-201ENST00000548278 VWC2Q2TAL6 325 aa17.06■□□□□ 0.32
RITA1-201ENST00000548278 OR5AN1Q8NGI8 311 aa17.06■□□□□ 0.32
RITA1-201ENST00000548278 ST6GALNAC6Q969X2 333 aa17.06■□□□□ 0.32
RITA1-201ENST00000548278 A0A1W2PPR1 153 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms