RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 ARPC4P59998 168 aa14.33□□□□□ -0.12
CHMP1A-203ENST00000547614 RPL30P62888 115 aaKnown RBP14.33□□□□□ -0.12
CHMP1A-203ENST00000547614 EIF4EBP1Q13541 118 aaPredicted RBP14.33□□□□□ -0.12
CHMP1A-203ENST00000547614 MSMO1Q15800 293 aa14.33□□□□□ -0.12
CHMP1A-203ENST00000547614 MMD2Q8IY49 270 aa14.33□□□□□ -0.12
CHMP1A-203ENST00000547614 OR6Q1Q8NGQ2 317 aa14.33□□□□□ -0.12
CHMP1A-203ENST00000547614 SRSF12Q8WXF0 261 aaKnown RBP14.33□□□□□ -0.12
CHMP1A-203ENST00000547614 SPIN2AQ99865 258 aa14.33□□□□□ -0.12
CHMP1A-203ENST00000547614 SPIN2BQ9BPZ2 258 aa14.33□□□□□ -0.12
CHMP1A-203ENST00000547614 ELOVL1Q9BW60 279 aa14.33□□□□□ -0.12
CHMP1A-203ENST00000547614 AUNIPQ9H7T9 357 aa14.33□□□□□ -0.12
CHMP1A-203ENST00000547614 ZNF430Q9H8G1 570 aaPredicted RBP14.33□□□□□ -0.12
CHMP1A-203ENST00000547614 VCX3AQ9NNX9 186 aa14.33□□□□□ -0.12
CHMP1A-203ENST00000547614 A0A087WXM4 84 aa14.32□□□□□ -0.12
CHMP1A-203ENST00000547614 OR9G9P0C7N8 305 aa14.32□□□□□ -0.12
CHMP1A-203ENST00000547614 CBX5P45973 191 aa14.32□□□□□ -0.12
CHMP1A-203ENST00000547614 ZNF343Q6P1L6 599 aa14.32□□□□□ -0.12
CHMP1A-203ENST00000547614 ZNF66Q6ZN08 573 aa14.32□□□□□ -0.12
CHMP1A-203ENST00000547614 MFSD4AQ8N468 514 aa14.32□□□□□ -0.12
CHMP1A-203ENST00000547614 GVQW1Q8N7I0 195 aa14.32□□□□□ -0.12
CHMP1A-203ENST00000547614 ADAD2Q8NCV1 583 aaKnown RBP14.32□□□□□ -0.12
CHMP1A-203ENST00000547614 OR4S2Q8NH73 311 aa14.32□□□□□ -0.12
CHMP1A-203ENST00000547614 ACOT12Q8WYK0 555 aa14.32□□□□□ -0.12
CHMP1A-203ENST00000547614 COA4Q9NYJ1 87 aa14.32□□□□□ -0.12
CHMP1A-203ENST00000547614 SMAD5-AS1Q9Y6J3 95 aa14.32□□□□□ -0.12
CHMP1A-203ENST00000547614 DNAH9Q9NYC9 4486 aa14.31□□□□□ -0.12
CHMP1A-203ENST00000547614 AIREO43918 545 aa14.31□□□□□ -0.12
CHMP1A-203ENST00000547614 TNFAIP8O95379 198 aa14.31□□□□□ -0.12
CHMP1A-203ENST00000547614 SPNP16150 400 aa14.31□□□□□ -0.12
CHMP1A-203ENST00000547614 TSPAN14Q8NG11 270 aa14.31□□□□□ -0.12
CHMP1A-203ENST00000547614 VSTM2AQ8TAG5 236 aa14.31□□□□□ -0.12
CHMP1A-203ENST00000547614 S100A16Q96FQ6 103 aaKnown RBP14.31□□□□□ -0.12
CHMP1A-203ENST00000547614 ANKRD34BA5PLL1 514 aa14.3□□□□□ -0.12
CHMP1A-203ENST00000547614 MPPED1O15442 326 aa14.3□□□□□ -0.12
CHMP1A-203ENST00000547614 XRCC3O43542 346 aa14.3□□□□□ -0.12
CHMP1A-203ENST00000547614 FCGR2CP31995 323 aa14.3□□□□□ -0.12
CHMP1A-203ENST00000547614 BRWD1-AS2P59051 145 aa14.3□□□□□ -0.12
CHMP1A-203ENST00000547614 DYRK1AQ13627 763 aa14.3□□□□□ -0.12
CHMP1A-203ENST00000547614 KLF5Q13887 457 aaPredicted RBP14.3□□□□□ -0.12
CHMP1A-203ENST00000547614 OR2B11Q5JQS5 317 aa14.3□□□□□ -0.12
CHMP1A-203ENST00000547614 ZBTB34Q8NCN2 500 aa14.3□□□□□ -0.12
CHMP1A-203ENST00000547614 TCTEX1D2Q8WW35 142 aa14.3□□□□□ -0.12
CHMP1A-203ENST00000547614 YIPF6Q96EC8 236 aa14.3□□□□□ -0.12
CHMP1A-203ENST00000547614 WWC2-AS2Q96NR7 200 aa14.3□□□□□ -0.12
CHMP1A-203ENST00000547614 TAS2R8Q9NYW2 309 aa14.3□□□□□ -0.12
CHMP1A-203ENST00000547614 PEF1Q9UBV8 284 aaKnown RBP14.3□□□□□ -0.12
CHMP1A-203ENST00000547614 OR2A4O95047 310 aa14.29□□□□□ -0.12
CHMP1A-203ENST00000547614 PPYP01298 95 aa14.29□□□□□ -0.12
CHMP1A-203ENST00000547614 APELAP0DMC3 54 aa14.29□□□□□ -0.12
CHMP1A-203ENST00000547614 GP9P14770 177 aa14.29□□□□□ -0.12
CHMP1A-203ENST00000547614 RPS19P39019 145 aaKnown RBP14.29□□□□□ -0.12
CHMP1A-203ENST00000547614 KIR2DS2P43631 304 aa14.29□□□□□ -0.12
CHMP1A-203ENST00000547614 PUSL1Q8N0Z8 303 aaKnown RBP14.29□□□□□ -0.12
CHMP1A-203ENST00000547614 TTC9CQ8N5M4 171 aa14.29□□□□□ -0.12
CHMP1A-203ENST00000547614 OR5AP2Q8NGF4 316 aa14.29□□□□□ -0.12
CHMP1A-203ENST00000547614 OR13F1Q8NGS4 319 aa14.29□□□□□ -0.12
CHMP1A-203ENST00000547614 GIMAP1Q8WWP7 306 aa14.29□□□□□ -0.12
CHMP1A-203ENST00000547614 OR2A7Q96R45 310 aa14.29□□□□□ -0.12
CHMP1A-203ENST00000547614 TRBV9A0A0B4J1U6 114 aa14.28□□□□□ -0.12
CHMP1A-203ENST00000547614 FAM223BA6NKX1 122 aa14.28□□□□□ -0.12
CHMP1A-203ENST00000547614 KBTBD11O94819 623 aa14.28□□□□□ -0.12
CHMP1A-203ENST00000547614 HRASP01112 189 aa14.28□□□□□ -0.12
CHMP1A-203ENST00000547614 IGLV1-51P01701 117 aa14.28□□□□□ -0.12
CHMP1A-203ENST00000547614 MAS1LP35410 378 aa14.28□□□□□ -0.12
CHMP1A-203ENST00000547614 TATDN3Q17R31 274 aa14.28□□□□□ -0.12
CHMP1A-203ENST00000547614 SLC25A42Q86VD7 318 aa14.28□□□□□ -0.12
CHMP1A-203ENST00000547614 FAM223AQ8IWN6 122 aa14.28□□□□□ -0.12
CHMP1A-203ENST00000547614 VKORC1L1Q8N0U8 176 aa14.28□□□□□ -0.12
CHMP1A-203ENST00000547614 TMEM167AQ8TBQ9 72 aa14.28□□□□□ -0.12
CHMP1A-203ENST00000547614 SECTM1Q8WVN6 248 aa14.28□□□□□ -0.12
CHMP1A-203ENST00000547614 SNAPC3Q92966 411 aa14.28□□□□□ -0.12
CHMP1A-203ENST00000547614 AIFM2Q9BRQ8 373 aa14.28□□□□□ -0.12
CHMP1A-203ENST00000547614 CCL28Q9NRJ3 127 aa14.28□□□□□ -0.12
CHMP1A-203ENST00000547614 U3KQK5 164 aa14.28□□□□□ -0.12
CHMP1A-203ENST00000547614 RBFOX2O43251 390 aaKnown RBP eCLIP14.27□□□□□ -0.13
CHMP1A-203ENST00000547614 RBMXL2O75526 392 aaKnown RBP14.27□□□□□ -0.13
CHMP1A-203ENST00000547614 PTHLHP12272 177 aa14.27□□□□□ -0.13
CHMP1A-203ENST00000547614 TGFBR1P36897 503 aa14.27□□□□□ -0.13
CHMP1A-203ENST00000547614 RHOGP84095 191 aa14.27□□□□□ -0.13
CHMP1A-203ENST00000547614 UBE2NLQ5JXB2 153 aa14.27□□□□□ -0.13
CHMP1A-203ENST00000547614 ANKRD13BQ86YJ7 626 aa14.27□□□□□ -0.13
CHMP1A-203ENST00000547614 OR9G4Q8NGQ1 327 aa14.27□□□□□ -0.13
CHMP1A-203ENST00000547614 AKIP1Q9NQ31 210 aa14.27□□□□□ -0.13
CHMP1A-203ENST00000547614 TENM3Q9P273 2699 aa14.27□□□□□ -0.13
CHMP1A-203ENST00000547614 TRIM64CA6NLI5 447 aa14.26□□□□□ -0.13
CHMP1A-203ENST00000547614 FAM209BQ5JX69 171 aa14.26□□□□□ -0.13
CHMP1A-203ENST00000547614 C10orf55Q5SWW7 151 aa14.26□□□□□ -0.13
CHMP1A-203ENST00000547614 SAMD12Q8N8I0 201 aa14.26□□□□□ -0.13
CHMP1A-203ENST00000547614 NECAP1Q8NC96 275 aa14.26□□□□□ -0.13
CHMP1A-203ENST00000547614 BORCS5Q969J3 196 aa14.26□□□□□ -0.13
CHMP1A-203ENST00000547614 KCTD12Q96CX2 325 aaKnown RBP14.26□□□□□ -0.13
CHMP1A-203ENST00000547614 SLC5A7Q9GZV3 580 aa14.26□□□□□ -0.13
CHMP1A-203ENST00000547614 ZNF257Q9Y2Q1 563 aa14.26□□□□□ -0.13
CHMP1A-203ENST00000547614 TRBV12-3P01733 135 aa14.25□□□□□ -0.13
CHMP1A-203ENST00000547614 RPL27AP46776 148 aaKnown RBP14.25□□□□□ -0.13
CHMP1A-203ENST00000547614 SYNJ2BPP57105 145 aa14.25□□□□□ -0.13
CHMP1A-203ENST00000547614 LSM3P62310 102 aaKnown RBP14.25□□□□□ -0.13
CHMP1A-203ENST00000547614 DEFA5Q01523 94 aa14.25□□□□□ -0.13
CHMP1A-203ENST00000547614 ZNF45Q02386 682 aa14.25□□□□□ -0.13
CHMP1A-203ENST00000547614 ATP5G2Q06055 141 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms