RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 TRIM63Q969Q1 353 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 NOL4LQ96MY1 436 aaPredicted RBP11.39□□□□□ -0.59
DDX54-203ENST00000546869 PRRT1Q99946 306 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 SRRQ9GZT4 340 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 PLEKHA2Q9HB19 425 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 NUBP2Q9Y5Y2 271 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 CREBL2O60519 120 aaPredicted RBP11.38□□□□□ -0.59
DDX54-203ENST00000546869 FGF2P09038 288 aa11.38□□□□□ -0.59
DDX54-203ENST00000546869 CD28P10747 220 aa11.38□□□□□ -0.59
DDX54-203ENST00000546869 PPIFP30405 207 aaKnown RBP11.38□□□□□ -0.59
DDX54-203ENST00000546869 TAS2R31P59538 309 aa11.38□□□□□ -0.59
DDX54-203ENST00000546869 KLF9Q13886 244 aaPredicted RBP11.38□□□□□ -0.59
DDX54-203ENST00000546869 POU2AF1Q16633 256 aa11.38□□□□□ -0.59
DDX54-203ENST00000546869 MRGPRG-AS1Q2M3A8 158 aa11.38□□□□□ -0.59
DDX54-203ENST00000546869 AKIRIN2Q53H80 203 aa11.38□□□□□ -0.59
DDX54-203ENST00000546869 PRR31Q5SQ13 230 aa11.38□□□□□ -0.59
DDX54-203ENST00000546869 TEX38Q6PEX7 206 aa11.38□□□□□ -0.59
DDX54-203ENST00000546869 PUSL1Q8N0Z8 303 aaKnown RBP11.38□□□□□ -0.59
DDX54-203ENST00000546869 RNF152Q8N8N0 203 aa11.38□□□□□ -0.59
DDX54-203ENST00000546869 MINDY2Q8NBR6 621 aa11.38□□□□□ -0.59
DDX54-203ENST00000546869 OR4X2Q8NGF9 303 aa11.38□□□□□ -0.59
DDX54-203ENST00000546869 M0QZ24 198 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 RAMP3O60896 148 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 CA2P00918 260 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 IGHG4P01861 327 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 OPN1MWP04001 364 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 RLN1P04808 185 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 ELANEP08246 267 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 IL6RP08887 468 aaPredicted RBP11.37□□□□□ -0.59
DDX54-203ENST00000546869 OPN1MW2P0DN77 364 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 OPN1MW3P0DN78 364 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 EGR2P11161 476 aaPredicted RBP11.37□□□□□ -0.59
DDX54-203ENST00000546869 VDAC1P21796 283 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 TMEM267Q0VDI3 215 aaPredicted RBP11.37□□□□□ -0.59
DDX54-203ENST00000546869 PRSS8Q16651 343 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 CNPY1Q3B7I2 92 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 C19orf54Q5BKX5 351 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 TCTEX1D4Q5JR98 221 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 NDUFA11Q86Y39 141 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 TOMM5Q8N4H5 51 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 OR4A5Q8NH83 315 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 MRGPRFQ96AM1 343 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 RHOVQ96L33 236 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 TMEM68Q96MH6 324 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 GPHA2Q96T91 129 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 SLC2A9Q9NRM0 540 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 COMMD9Q9P000 198 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 LINC00527Q9UJ94 153 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 SCP2D1Q9UJQ7 156 aa11.37□□□□□ -0.59
DDX54-203ENST00000546869 ATP6V0E1O15342 81 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 MPPED1O15442 326 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 B3GALNT1O75752 331 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 OR2A4O95047 310 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 CTSDP07339 412 aaPredicted RBP11.36□□□□□ -0.59
DDX54-203ENST00000546869 SAA1P0DJI8 122 aaPredicted RBP11.36□□□□□ -0.59
DDX54-203ENST00000546869 NQO2P16083 231 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 FAUP35544 74 aaKnown RBP11.36□□□□□ -0.59
DDX54-203ENST00000546869 SSBP2P81877 361 aaPredicted RBP11.36□□□□□ -0.59
DDX54-203ENST00000546869 NDPQ00604 133 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 FOXE3Q13461 319 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 FXYD3Q14802 87 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 SCGB2B2Q4G0G5 96 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 OR2B11Q5JQS5 317 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 OR51H1Q8NH63 302 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 TMEM167AQ8TBQ9 72 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 OR2A7Q96R45 310 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 CLCC1Q96S66 551 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 CITED2Q99967 270 aaPredicted RBP11.36□□□□□ -0.59
DDX54-203ENST00000546869 TPSG1Q9NRR2 321 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 ZFP57Q9NU63 452 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 BET1LQ9NYM9 111 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 GPR132Q9UNW8 380 aa11.36□□□□□ -0.59
DDX54-203ENST00000546869 TSSC4Q9Y5U2 329 aaPredicted RBP11.36□□□□□ -0.59
DDX54-203ENST00000546869 TRAV41A0A0B4J266 112 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 ARPC1BO15143 372 aaKnown RBP11.35□□□□□ -0.59
DDX54-203ENST00000546869 IGLV1-40P01703 118 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 PGAM2P15259 253 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 SLC6A1P30531 599 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 MAS1LP35410 378 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 PJVKQ0ZLH3 352 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 C2orf68Q2NKX9 166 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 ZNF585BQ52M93 769 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 PHLDA2Q53GA4 152 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 FAAP20Q6NZ36 180 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 C10orf99Q6UWK7 81 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 IDO2Q6ZQW0 420 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 ZNF329Q86UD4 541 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 TBC1D26Q86UD7 250 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 MMD2Q8IY49 270 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 OR51S1Q8NGJ8 323 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 OR13C8Q8NGS7 320 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 MARCH1Q8TCQ1 289 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 ARPC1AQ92747 370 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 SCGB3A2Q96PL1 93 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 SDHCQ99643 169 aaPredicted RBP11.35□□□□□ -0.59
DDX54-203ENST00000546869 HRASLSQ9HDD0 168 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 PARP11Q9NR21 331 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 PTTG2Q9NZH5 202 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 FBXO7Q9Y3I1 522 aa11.35□□□□□ -0.59
DDX54-203ENST00000546869 TCRBV4S1A1TA0A5B7 111 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms