RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 PRRG2O14669 202 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 CDIPTO14735 213 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 LYL1P12980 280 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 CRYBB3P26998 211 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 CCL20P78556 96 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 C9orf40Q8IXQ3 194 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 NUDT10Q8NFP7 164 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 VWCEQ96DN2 955 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 ZNF638Q14966 1978 aaKnown RBP10.97□□□□□ -0.65
PTCH1-212ENST00000546744 PIKFYVEQ9Y2I7 2098 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 PAPPA-AS1Q5QFB9 102 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 FAM216AQ8WUB2 273 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 C20orf144Q9BQM9 153 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 WDR54Q9H977 334 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 JPT1Q9UK76 154 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 M0R1B8 84 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 SLC25A17O43808 307 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 ZNF205O95201 554 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 ID3Q02535 119 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 ZNF146Q15072 292 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 TMEM52Q8NDY8 209 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 OR9G4Q8NGQ1 327 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 OR1N2Q8NGR9 330 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 RND1Q92730 232 aa10.97□□□□□ -0.65
PTCH1-212ENST00000546744 F5H697 171 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 EFEMP2O95967 443 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 UMODP07911 640 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 LIFP15018 202 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 SRSF3P84103 164 aaKnown RBP10.96□□□□□ -0.65
PTCH1-212ENST00000546744 TBR1Q16650 682 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 DGAT2L7PQ6IED9 249 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 FAM89BQ8N5H3 189 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 C18orf12Q96KH6 178 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 TMEM208Q9BTX3 173 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 FNDC1Q4ZHG4 1894 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-212ENST00000546744 A0A1B0GWB2 263 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 PGPA6NDG6 321 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 PPP1R17O96001 155 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 RAB9AP51151 201 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 RND2P52198 227 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 GAB4Q2WGN9 574 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 KIAA1644Q3SXP7 199 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 TIMM23BQ5SRD1 257 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 ZNF818PQ6ZRF7 136 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 CHCHD1Q96BP2 118 aaKnown RBP10.96□□□□□ -0.65
PTCH1-212ENST00000546744 DEFB127Q9H1M4 99 aa10.96□□□□□ -0.65
PTCH1-212ENST00000546744 TRAV17A0A0B4J275 112 aa10.96□□□□□ -0.66
PTCH1-212ENST00000546744 ASPHD2Q6ICH7 369 aa10.96□□□□□ -0.66
PTCH1-212ENST00000546744 SLC25A28Q96A46 364 aa10.96□□□□□ -0.66
PTCH1-212ENST00000546744 ABHD14AQ9BUJ0 271 aa10.96□□□□□ -0.66
PTCH1-212ENST00000546744 SPTBP11277 2137 aa10.96□□□□□ -0.66
PTCH1-212ENST00000546744 GBF1Q92538 1859 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 IGHV3-64DA0A0J9YX35 117 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 A8MWP6 167 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 HRKO00198 91 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 PTGDSP41222 190 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 SSPNQ14714 243 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 NABP2Q9BQ15 211 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 ZNF576Q9H609 170 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 DLL3Q9NYJ7 618 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 DTX4Q9Y2E6 619 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 LY96Q9Y6Y9 160 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 RBFOX2O43251 390 aaKnown RBP eCLIP10.95□□□□□ -0.66
PTCH1-212ENST00000546744 THY1P04216 161 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 TNFAIP6P98066 277 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-212ENST00000546744 TNXAQ16473 311 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 ATP5L2Q7Z4Y8 100 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 SLC25A10Q9UBX3 287 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-212ENST00000546744 TCF19Q9Y242 345 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 GOSR1O95249 250 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 SRFP11831 508 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 HSD52Q0P140 79 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 LHFPL1Q86WI0 220 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 IGHV1-69-2A0A0G2JMI3 117 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 TDHQ8IZJ6 230 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 WNT10AQ9GZT5 417 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 RNF7Q9UBF6 113 aa10.95□□□□□ -0.66
PTCH1-212ENST00000546744 NDUFS6O75380 124 aaKnown RBP10.94□□□□□ -0.66
PTCH1-212ENST00000546744 IL11P20809 199 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 TDGF1P3P51864 188 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 SRSF7Q16629 238 aaKnown RBP eCLIP10.94□□□□□ -0.66
PTCH1-212ENST00000546744 SPANXN1Q5VSR9 72 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 KNTC1P50748 2209 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 LINC01565O15544 149 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 PATE4P0C8F1 98 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 PSG4Q00888 419 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 C10orf91Q5T1B1 145 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 PRNTQ86SH4 94 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 A0A1W2PR80 420 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 SPRY3O43610 288 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 ADRA2AP08913 450 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 SFTPA2Q8IWL1 248 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 SFTPA1Q8IWL2 248 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 ATOH7Q8N100 152 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 ABHD3Q8WU67 409 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 MRPS16Q9Y3D3 137 aaKnown RBP10.94□□□□□ -0.66
PTCH1-212ENST00000546744 TSC2P49815 1807 aa10.94□□□□□ -0.66
PTCH1-212ENST00000546744 ZG16O60844 167 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 WNT5AP41221 380 aa10.93□□□□□ -0.66
PTCH1-212ENST00000546744 STPG3Q8N7X2 389 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms