RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 IL24Q13007 206 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 HIST3H3Q16695 136 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 TMEM95Q3KNT9 176 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 ZNF506Q5JVG8 444 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 CISD2Q8N5K1 135 aaKnown RBP8.28□□□□□ -1.08
TRAF1-203ENST00000546084 C11orf42Q8N5U0 333 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 OR51G1Q8NGK1 321 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 TPPP3Q9BW30 176 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 GAL3ST2Q9H3Q3 398 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 XKRY2A2RUG3 117 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 H3BTX0 84 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 DLEU1O43261 78 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 SP9P0CG40 484 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 BCL2P10415 239 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 WDR73Q6P4I2 378 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 S1PR3Q99500 378 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 CCL13Q99616 98 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 ZNRD1Q9P1U0 126 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 IGKV1-6A0A0C4DH72 117 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 CLDN14O95500 239 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 PF4V1P10720 104 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 GATA2P23769 480 aaPredicted RBP8.27□□□□□ -1.09
TRAF1-203ENST00000546084 ZADH2Q8N4Q0 377 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 OR10A7Q8NGE5 316 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 SPRR3Q9UBC9 169 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 ABCA2Q9BZC7 2435 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 MYOD1P15172 320 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 UCP3P55916 312 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 ARSJQ5FYB0 599 aaPredicted RBP8.27□□□□□ -1.09
TRAF1-203ENST00000546084 FAM78BQ5VT40 261 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 UNQ6494/PRO21346Q6UXR6 183 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 POM121L2Q96KW2 1035 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 CHODLQ9H9P2 273 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 DECR2Q9NUI1 292 aa8.27□□□□□ -1.09
TRAF1-203ENST00000546084 OR5B21A6NL26 309 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 C12orf77C9JDV5 145 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 M0QZK8 103 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 NTN3O00634 580 aaPredicted RBP8.26□□□□□ -1.09
TRAF1-203ENST00000546084 OR5G3P0C626 314 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 OR10J4P0C629 311 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 COMPP49747 757 aaPredicted RBP8.26□□□□□ -1.09
TRAF1-203ENST00000546084 TFF3Q07654 80 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 SMIM21Q3B7S5 101 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 ASPHD1Q5U4P2 390 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 PPP1R35Q8TAP8 253 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 OR5P3Q8WZ94 311 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 TNFRSF14Q92956 283 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 SARAFQ96BY9 339 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 IL19Q9UHD0 177 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 MPC1Q9Y5U8 109 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 A0A087WWC5 75 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 LOC102723971A0A1B0GUV8 181 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 CYC1P08574 325 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 CD82P27701 267 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 DLX1P56177 255 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 FAM27E3Q08E93 113 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 TMEM41BQ5BJD5 291 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 RPRMLQ8N4K4 120 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 NHLRC2Q8NBF2 726 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 OR13A1Q8NGR1 328 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 R3HDM4Q96D70 268 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 OR2V2Q96R30 315 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 SAMD10Q9BYL1 202 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 PRDM13Q9H4Q3 707 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 PITPNC1Q9UKF7 332 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 TMEM131Q92545 1883 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 SERTM2A0A1B0GWG4 89 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 J3QW42 95 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 IL18BPO95998 194 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 GYPAP02724 150 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 IGHV1-2P23083 117 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 OTX1P32242 354 aaPredicted RBP8.26□□□□□ -1.09
TRAF1-203ENST00000546084 PNRC1Q12796 327 aaPredicted RBP8.26□□□□□ -1.09
TRAF1-203ENST00000546084 FOXC1Q12948 553 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 PMS2P11Q13670 270 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 OR2D3Q8NGH3 330 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 MRPL30Q8TCC3 161 aaKnown RBP8.26□□□□□ -1.09
TRAF1-203ENST00000546084 CLUHP3Q96NS8 147 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 HIST1H2BLQ99880 126 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 DDA1Q9BW61 102 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 DNAJC4Q9NNZ3 241 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.26□□□□□ -1.09
TRAF1-203ENST00000546084 FUT9Q9Y231 359 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 ADGRG4Q8IZF6 3080 aa8.26□□□□□ -1.09
TRAF1-203ENST00000546084 RNF212BA8MTL3 300 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 B4DEV8 164 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 NTF3P20783 257 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 COL8A2P25067 703 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 MDH2P40926 338 aaKnown RBP8.25□□□□□ -1.09
TRAF1-203ENST00000546084 PRRX1P54821 245 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 TMEM241Q24JQ0 296 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 MIC13Q5XKP0 118 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 FAM214BQ7L5A3 538 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 H1FOOQ8IZA3 346 aaPredicted RBP8.25□□□□□ -1.09
TRAF1-203ENST00000546084 ITLN1Q8WWA0 313 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 RAB40CQ96S21 281 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 C2orf88Q9BSF0 95 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 IGLV3-32A0A0A0MS00 114 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 J3KRW8 73 aa8.25□□□□□ -1.09
TRAF1-203ENST00000546084 NPSP0C0P6 89 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms