RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 A8MWP6 167 aa12.46□□□□□ -0.41
CPSF7-225ENST00000545934 OR2J3O76001 311 aa12.46□□□□□ -0.41
CPSF7-225ENST00000545934 HLA-AP01891 365 aaKnown RBP12.46□□□□□ -0.41
CPSF7-225ENST00000545934 SAA1P0DJI8 122 aaPredicted RBP12.46□□□□□ -0.41
CPSF7-225ENST00000545934 EWSR1Q01844 656 aaKnown RBP eCLIP12.46□□□□□ -0.41
CPSF7-225ENST00000545934 PLA2G7Q13093 441 aa12.46□□□□□ -0.41
CPSF7-225ENST00000545934 SPHARQ15513 63 aa12.46□□□□□ -0.41
CPSF7-225ENST00000545934 KLK9Q2XQG4 91 aa12.46□□□□□ -0.41
CPSF7-225ENST00000545934 C10orf55Q5SWW7 151 aa12.46□□□□□ -0.41
CPSF7-225ENST00000545934 SLC16A13Q7RTY0 426 aa12.46□□□□□ -0.41
CPSF7-225ENST00000545934 WFDC3Q8IUB2 231 aa12.46□□□□□ -0.41
CPSF7-225ENST00000545934 CACNG8Q8WXS5 425 aa12.46□□□□□ -0.41
CPSF7-225ENST00000545934 KLK9Q9UKQ9 250 aa12.46□□□□□ -0.41
CPSF7-225ENST00000545934 AK6Q9Y3D8 172 aaKnown RBP12.46□□□□□ -0.41
CPSF7-225ENST00000545934 TMEM213A2RRL7 107 aa12.45□□□□□ -0.42
CPSF7-225ENST00000545934 NUPR2A6NF83 97 aa12.45□□□□□ -0.42
CPSF7-225ENST00000545934 TEX22C9J3V5 150 aa12.45□□□□□ -0.42
CPSF7-225ENST00000545934 OR2C1O95371 312 aa12.45□□□□□ -0.42
CPSF7-225ENST00000545934 CLDN12P56749 244 aa12.45□□□□□ -0.42
CPSF7-225ENST00000545934 RAB11BQ15907 218 aa12.45□□□□□ -0.42
CPSF7-225ENST00000545934 C2orf76Q3KRA6 126 aa12.45□□□□□ -0.42
CPSF7-225ENST00000545934 MMD2Q8IY49 270 aa12.45□□□□□ -0.42
CPSF7-225ENST00000545934 H1FOOQ8IZA3 346 aaPredicted RBP12.45□□□□□ -0.42
CPSF7-225ENST00000545934 FAM3DQ96BQ1 224 aa12.45□□□□□ -0.42
CPSF7-225ENST00000545934 MLXQ9UH92 298 aa12.45□□□□□ -0.42
CPSF7-225ENST00000545934 ZNF257Q9Y2Q1 563 aa12.45□□□□□ -0.42
CPSF7-225ENST00000545934 LOC102724200A0A096LPH7 203 aaPredicted RBP12.44□□□□□ -0.42
CPSF7-225ENST00000545934 MFNGO00587 321 aa12.44□□□□□ -0.42
CPSF7-225ENST00000545934 DENRO43583 198 aaKnown RBP12.44□□□□□ -0.42
CPSF7-225ENST00000545934 CREBL2O60519 120 aaPredicted RBP12.44□□□□□ -0.42
CPSF7-225ENST00000545934 TNFRSF9Q07011 255 aa12.44□□□□□ -0.42
CPSF7-225ENST00000545934 IRF3Q14653 427 aa12.44□□□□□ -0.42
CPSF7-225ENST00000545934 Q6ZS49 121 aa12.44□□□□□ -0.42
CPSF7-225ENST00000545934 C19orf35Q6ZS72 473 aa12.44□□□□□ -0.42
CPSF7-225ENST00000545934 SLC25A42Q86VD7 318 aa12.44□□□□□ -0.42
CPSF7-225ENST00000545934 CCDC140Q96MF4 163 aa12.44□□□□□ -0.42
CPSF7-225ENST00000545934 FANCD2OSQ96PS1 177 aa12.44□□□□□ -0.42
CPSF7-225ENST00000545934 VPS13DQ5THJ4 4388 aa12.44□□□□□ -0.42
CPSF7-225ENST00000545934 TMEM272A0A1B0GTI8 110 aa12.43□□□□□ -0.42
CPSF7-225ENST00000545934 NPIPB5A8MRT5 1133 aa12.43□□□□□ -0.42
CPSF7-225ENST00000545934 LIPKQ5VXJ0 399 aa12.43□□□□□ -0.42
CPSF7-225ENST00000545934 ZNF57Q68EA5 555 aaPredicted RBP12.43□□□□□ -0.42
CPSF7-225ENST00000545934 CEMP1Q6PRD7 247 aaPredicted RBP12.43□□□□□ -0.42
CPSF7-225ENST00000545934 OR52B4Q8NGK2 314 aa12.43□□□□□ -0.42
CPSF7-225ENST00000545934 MAFIPQ8WZ33 124 aa12.43□□□□□ -0.42
CPSF7-225ENST00000545934 TMEM203Q969S6 136 aa12.43□□□□□ -0.42
CPSF7-225ENST00000545934 TP53TG1Q9Y2A0 90 aa12.43□□□□□ -0.42
CPSF7-225ENST00000545934 SELENOKQ9Y6D0 94 aa12.43□□□□□ -0.42
CPSF7-225ENST00000545934 A0A0J9YWU9 116 aa12.42□□□□□ -0.42
CPSF7-225ENST00000545934 A0A1B0GW64 132 aa12.42□□□□□ -0.42
CPSF7-225ENST00000545934 CXorf65A6NEN9 183 aa12.42□□□□□ -0.42
CPSF7-225ENST00000545934 HMX3A6NHT5 357 aa12.42□□□□□ -0.42
CPSF7-225ENST00000545934 E7EUB6 86 aa12.42□□□□□ -0.42
CPSF7-225ENST00000545934 ACTL6BO94805 426 aa12.42□□□□□ -0.42
CPSF7-225ENST00000545934 NDUFB8O95169 186 aa12.42□□□□□ -0.42
CPSF7-225ENST00000545934 CRYGCP07315 174 aa12.42□□□□□ -0.42
CPSF7-225ENST00000545934 IL6RP08887 468 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-225ENST00000545934 ATF4P18848 351 aaPredicted RBP12.42□□□□□ -0.42
CPSF7-225ENST00000545934 PMS2P11Q13670 270 aa12.42□□□□□ -0.42
CPSF7-225ENST00000545934 MED22Q15528 200 aa12.42□□□□□ -0.42
CPSF7-225ENST00000545934 UFD1Q92890 307 aa12.42□□□□□ -0.42
CPSF7-225ENST00000545934 RAB3CQ96E17 227 aa12.42□□□□□ -0.42
CPSF7-225ENST00000545934 FBXL7Q9UJT9 491 aa12.42□□□□□ -0.42
CPSF7-225ENST00000545934 RAB22AQ9UL26 194 aa12.42□□□□□ -0.42
CPSF7-225ENST00000545934 RBM7Q9Y580 266 aaKnown RBP12.42□□□□□ -0.42
CPSF7-225ENST00000545934 KIAA1109Q2LD37 5005 aa12.41□□□□□ -0.42
CPSF7-225ENST00000545934 IGKV1D-8A0A087WSZ0 117 aa12.41□□□□□ -0.42
CPSF7-225ENST00000545934 ARL6IP5O75915 188 aa12.41□□□□□ -0.42
CPSF7-225ENST00000545934 IGLV2-14P01704 120 aa12.41□□□□□ -0.42
CPSF7-225ENST00000545934 ZNF735P0CB33 412 aa12.41□□□□□ -0.42
CPSF7-225ENST00000545934 C8orf88P0DMB2 117 aa12.41□□□□□ -0.42
CPSF7-225ENST00000545934 ARL3P36405 182 aa12.41□□□□□ -0.42
CPSF7-225ENST00000545934 RPS25P62851 125 aaKnown RBP12.41□□□□□ -0.42
CPSF7-225ENST00000545934 MRPS15P82914 257 aaKnown RBP12.41□□□□□ -0.42
CPSF7-225ENST00000545934 TRAM1Q15629 374 aa12.41□□□□□ -0.42
CPSF7-225ENST00000545934 CLEC19AQ6UXS0 136 aa12.41□□□□□ -0.42
CPSF7-225ENST00000545934 LYG2Q86SG7 212 aa12.41□□□□□ -0.42
CPSF7-225ENST00000545934 PUSL1Q8N0Z8 303 aaKnown RBP12.41□□□□□ -0.42
CPSF7-225ENST00000545934 RPP25LQ8N5L8 163 aaKnown RBP12.41□□□□□ -0.42
CPSF7-225ENST00000545934 UXS1Q8NBZ7 420 aa12.41□□□□□ -0.42
CPSF7-225ENST00000545934 GINS4Q9BRT9 223 aa12.41□□□□□ -0.42
CPSF7-225ENST00000545934 OR51E2Q9H255 320 aa12.41□□□□□ -0.42
CPSF7-225ENST00000545934 TRAV25A0A0B4J276 109 aa12.4□□□□□ -0.42
CPSF7-225ENST00000545934 RAB27BO00194 218 aa12.4□□□□□ -0.42
CPSF7-225ENST00000545934 FCGR3BO75015 233 aa12.4□□□□□ -0.42
CPSF7-225ENST00000545934 IGHV3-23P01764 117 aa12.4□□□□□ -0.42
CPSF7-225ENST00000545934 GNB3P16520 340 aa12.4□□□□□ -0.42
CPSF7-225ENST00000545934 MAP2K4P45985 399 aa12.4□□□□□ -0.42
CPSF7-225ENST00000545934 RPL30P62888 115 aaKnown RBP12.4□□□□□ -0.42
CPSF7-225ENST00000545934 ANKRD55Q3KP44 614 aa12.4□□□□□ -0.42
CPSF7-225ENST00000545934 Q6ZWC4 215 aa12.4□□□□□ -0.42
CPSF7-225ENST00000545934 ZNF645Q8N7E2 425 aa12.4□□□□□ -0.42
CPSF7-225ENST00000545934 OR10R2Q8NGX6 335 aa12.4□□□□□ -0.42
CPSF7-225ENST00000545934 TMEM167AQ8TBQ9 72 aa12.4□□□□□ -0.42
CPSF7-225ENST00000545934 FYTTD1Q96QD9 318 aaKnown RBP12.4□□□□□ -0.42
CPSF7-225ENST00000545934 CENPOQ9BU64 300 aa12.4□□□□□ -0.42
CPSF7-225ENST00000545934 SLC2A9Q9NRM0 540 aa12.4□□□□□ -0.42
CPSF7-225ENST00000545934 V9GY05 133 aa12.4□□□□□ -0.42
CPSF7-225ENST00000545934 PTGES3LE9PB15 166 aa12.39□□□□□ -0.43
CPSF7-225ENST00000545934 KBTBD11O94819 623 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms