RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 RRP15Q9Y3B9 282 aaKnown RBP5.97□□□□□ -1.45
SNHG1-223ENST00000545440 FBXO7Q9Y3I1 522 aa5.97□□□□□ -1.45
SNHG1-223ENST00000545440 A0A0A6YYH2 397 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 LOC100506127A0A0U1RQW1 187 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 A0A1W2PN81 502 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 TMEM235A6NFC5 223 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 A6NJ64 397 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 CA2P00918 260 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 OR8U9P0C7N5 309 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 CD36P16671 472 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 CHRNA7P36544 502 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 CX3CL1P78423 397 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 DGCR2P98153 550 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 TMEM267Q0VDI3 215 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-223ENST00000545440 CBX3Q13185 183 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 DCTN2Q13561 401 aaKnown RBP5.96□□□□□ -1.46
SNHG1-223ENST00000545440 PSG5Q15238 335 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 RTL8BQ17RB0 113 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 AKIRIN2Q53H80 203 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 Q6ZNX1 250 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 KRTAP19-1Q8IUB9 90 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 ZNF491Q8N8L2 437 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 OR5M8Q8NGP6 311 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 MAFIPQ8WZ33 124 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 ARPC1AQ92747 370 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 FLYWCH2Q96CP2 140 aaKnown RBP5.96□□□□□ -1.46
SNHG1-223ENST00000545440 C5orf30Q96GV9 206 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 ADTRPQ96IZ2 230 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 DUX3Q96PT4 197 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 KRTAP3-1Q9BYR8 98 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 VCX3AQ9NNX9 186 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 SLC35D1Q9NTN3 355 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 DKK2Q9UBU2 259 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 ZMAT5Q9UDW3 170 aaKnown RBP5.96□□□□□ -1.46
SNHG1-223ENST00000545440 VSIG4Q9Y279 399 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 WSB1Q9Y6I7 421 aa5.96□□□□□ -1.46
SNHG1-223ENST00000545440 IGKV1D-8A0A087WSZ0 117 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 I3L521 148 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 K7EIL1 84 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 SLC25A17O43808 307 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 SOX15O60248 233 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 TNFAIP8O95379 198 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 IGLV2-23P01705 113 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 CTXN2P0C2S0 81 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 OR8U8P0C7N1 319 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 RRASP10301 218 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 HOXD3P31249 432 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-223ENST00000545440 DUTP33316 252 aaKnown RBP5.95□□□□□ -1.46
SNHG1-223ENST00000545440 LGALS7P47929 136 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 RAB9AP51151 201 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 RAB25P57735 213 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 GNG2P59768 71 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 KRTAP10-11P60412 298 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 MXD1Q05195 221 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 ZNF616Q08AN1 781 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 KIAA0141Q14154 515 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-223ENST00000545440 ZNF260Q3ZCT1 412 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 CDNFQ49AH0 187 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 ACTBL2Q562R1 376 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 C9orf66Q5T8R8 295 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 ZNF562Q6V9R5 426 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 PPP1R27Q86WC6 154 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 CROCCP3Q8IVE0 287 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 OR11H1Q8NG94 326 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 NUDCD2Q8WVJ2 157 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 DDB2Q92466 427 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 SLC25A38Q96DW6 304 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 HARBI1Q96MB7 349 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 KLK15Q9H2R5 256 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 SLA2Q9H6Q3 261 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 GNB4Q9HAV0 340 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 ELF5Q9UKW6 265 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-223ENST00000545440 OR2W1Q9Y3N9 320 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 RBM7Q9Y580 266 aaKnown RBP5.95□□□□□ -1.46
SNHG1-223ENST00000545440 NUBP2Q9Y5Y2 271 aa5.95□□□□□ -1.46
SNHG1-223ENST00000545440 H3BUA1 57 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 FCN1O00602 326 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 SSX5O60225 188 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 RAMP3O60896 148 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 SLC22A5O76082 557 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 CRYGBP07316 175 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 LGALS1P09382 135 aaKnown RBP5.94□□□□□ -1.46
SNHG1-223ENST00000545440 CD40LGP29965 261 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 LUMP51884 338 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-223ENST00000545440 TIRAPP58753 221 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 LINC00205P59089 165 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 GNB1P62873 340 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 SSBP2P81877 361 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-223ENST00000545440 FXYD3Q14802 87 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 IDNKQ5T6J7 187 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 ASPHD1Q5U4P2 390 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 CNIH2Q6PI25 160 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 UNQ5815/PRO19632Q6UWF5 114 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 ZNF645Q8N7E2 425 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 OR5H6Q8NGV6 325 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 OSR1Q8TAX0 266 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-223ENST00000545440 TMEM68Q96MH6 324 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 FAM103A1Q9BTL3 118 aaKnown RBP5.94□□□□□ -1.46
SNHG1-223ENST00000545440 ST6GALNAC5Q9BVH7 336 aa5.94□□□□□ -1.46
SNHG1-223ENST00000545440 RNF167Q9H6Y7 350 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms