RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 FXYD6-FXYD2A0A087WZ82 144 aa11.12□□□□□ -0.63
SCARB1-209ENST00000545305 FAM90A9PA6NNJ1 464 aa11.12□□□□□ -0.63
SCARB1-209ENST00000545305 WRBO00258 174 aa11.12□□□□□ -0.63
SCARB1-209ENST00000545305 SMAD7O15105 426 aaKnown RBP11.12□□□□□ -0.63
SCARB1-209ENST00000545305 RBMXL2O75526 392 aaKnown RBP11.12□□□□□ -0.63
SCARB1-209ENST00000545305 MPC2O95563 127 aa11.12□□□□□ -0.63
SCARB1-209ENST00000545305 RLN2P04090 185 aa11.12□□□□□ -0.63
SCARB1-209ENST00000545305 CD1BP29016 333 aa11.12□□□□□ -0.63
SCARB1-209ENST00000545305 NKX2-1P43699 371 aaPredicted RBP11.12□□□□□ -0.63
SCARB1-209ENST00000545305 RAB32Q13637 225 aa11.12□□□□□ -0.63
SCARB1-209ENST00000545305 POU2AF1Q16633 256 aa11.12□□□□□ -0.63
SCARB1-209ENST00000545305 IZUMO4Q1ZYL8 232 aa11.12□□□□□ -0.63
SCARB1-209ENST00000545305 LDLRAD2Q5SZI1 272 aa11.12□□□□□ -0.63
SCARB1-209ENST00000545305 OR4D5Q8NGN0 318 aa11.12□□□□□ -0.63
SCARB1-209ENST00000545305 TMEM140Q9NV12 185 aa11.12□□□□□ -0.63
SCARB1-209ENST00000545305 COA4Q9NYJ1 87 aa11.12□□□□□ -0.63
SCARB1-209ENST00000545305 LSM5Q9Y4Y9 91 aaKnown RBP11.12□□□□□ -0.63
SCARB1-209ENST00000545305 FLNBO75369 2602 aaKnown RBP11.11□□□□□ -0.63
SCARB1-209ENST00000545305 ST8SIA3O43173 380 aa11.11□□□□□ -0.63
SCARB1-209ENST00000545305 SNAPC5O75971 98 aa11.11□□□□□ -0.63
SCARB1-209ENST00000545305 P0C879 139 aa11.11□□□□□ -0.63
SCARB1-209ENST00000545305 BRS3P32247 399 aa11.11□□□□□ -0.63
SCARB1-209ENST00000545305 LGALS7P47929 136 aa11.11□□□□□ -0.63
SCARB1-209ENST00000545305 IL15RAQ13261 267 aa11.11□□□□□ -0.63
SCARB1-209ENST00000545305 VMA21Q3ZAQ7 101 aa11.11□□□□□ -0.63
SCARB1-209ENST00000545305 RUSC1-AS1Q66K80 236 aa11.11□□□□□ -0.63
SCARB1-209ENST00000545305 C11orf87Q6NUJ2 197 aa11.11□□□□□ -0.63
SCARB1-209ENST00000545305 FOXRED2Q8IWF2 684 aa11.11□□□□□ -0.63
SCARB1-209ENST00000545305 VKORC1L1Q8N0U8 176 aa11.11□□□□□ -0.63
SCARB1-209ENST00000545305 OR4A16Q8NH70 328 aa11.11□□□□□ -0.63
SCARB1-209ENST00000545305 VSTM2AQ8TAG5 236 aa11.11□□□□□ -0.63
SCARB1-209ENST00000545305 TSNAXQ99598 290 aaKnown RBP11.11□□□□□ -0.63
SCARB1-209ENST00000545305 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.11□□□□□ -0.63
SCARB1-209ENST00000545305 CACFD1Q9UGQ2 172 aa11.11□□□□□ -0.63
SCARB1-209ENST00000545305 POMT1Q9Y6A1 747 aa11.11□□□□□ -0.63
SCARB1-209ENST00000545305 CREBBPQ92793 2442 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 TRAV14DV4A0A0A6YYC5 116 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 FAM90A26D6RGX4 464 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 G3V3Q6 166 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 VENTXO95231 258 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 MBPP02686 304 aaPredicted RBP11.1□□□□□ -0.63
SCARB1-209ENST00000545305 SAA1P0DJI8 122 aaPredicted RBP11.1□□□□□ -0.63
SCARB1-209ENST00000545305 IGHV4-38-2P0DP08 117 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 SLC25A4P12235 298 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 PVALBP20472 110 aaPredicted RBP11.1□□□□□ -0.63
SCARB1-209ENST00000545305 HABP2Q14520 560 aaPredicted RBP11.1□□□□□ -0.63
SCARB1-209ENST00000545305 Q5BKY6 102 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 OR4A47Q6IF82 309 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 PRSS54Q6PEW0 395 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 BRD3OSQ6XYD6 125 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 PIP4P2Q8N4L2 257 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 C17orf50Q8WW18 174 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 CFHR4Q92496 578 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 RNF5Q99942 180 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 BET1LQ9NYM9 111 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 MBD2Q9UBB5 411 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 FAM96BQ9Y3D0 163 aa11.1□□□□□ -0.63
SCARB1-209ENST00000545305 K7EPK0 472 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 PITX3O75364 302 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 MED6O75586 246 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 KBTBD11O94819 623 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 NXPH3O95157 252 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 MOSP00540 346 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 OR9G9P0C7N8 305 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 NUP62P37198 522 aaPredicted RBP11.09□□□□□ -0.63
SCARB1-209ENST00000545305 NKX2-5P52952 324 aaPredicted RBP11.09□□□□□ -0.63
SCARB1-209ENST00000545305 BPIFB3P59826 476 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 HES1Q14469 280 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 Q6ZRM9 215 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 DYNAPQ8N1N2 210 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 CIARTQ8N365 385 aaPredicted RBP11.09□□□□□ -0.63
SCARB1-209ENST00000545305 FAM71E2Q8N5Q1 922 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 TEX29Q8N6K0 151 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 OR2T10Q8NGZ9 312 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 OR4A5Q8NH83 315 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 DCUN1D4Q92564 292 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 PRNDQ9UKY0 176 aa11.09□□□□□ -0.63
SCARB1-209ENST00000545305 RCL1Q9Y2P8 373 aaKnown RBP11.09□□□□□ -0.63
SCARB1-209ENST00000545305 C15orf61A6NNL5 157 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 L7N2F9 121 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 DEDDO75618 318 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 SPDEFO95238 335 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 AVPP01185 164 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 IGKV1D-33P01593 117 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 IGKV1-33P01594 117 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 SNRNP70P08621 437 aaKnown RBP11.08□□□□□ -0.64
SCARB1-209ENST00000545305 OR2B8PP59922 312 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 UBE2KP61086 200 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 VAMP2P63027 116 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 ID3Q02535 119 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 CXorf66Q5JRM2 361 aaPredicted RBP11.08□□□□□ -0.64
SCARB1-209ENST00000545305 KLF17Q5JT82 389 aaPredicted RBP11.08□□□□□ -0.64
SCARB1-209ENST00000545305 PUSL1Q8N0Z8 303 aaKnown RBP11.08□□□□□ -0.64
SCARB1-209ENST00000545305 OR11H4Q8NGC9 324 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 GRPEL2Q8TAA5 225 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 NANPQ8TBE9 248 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 MAGT1Q9H0U3 335 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 NUP50Q9UKX7 468 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 NSG2Q9Y328 171 aa11.08□□□□□ -0.64
SCARB1-209ENST00000545305 CCDC168Q8NDH2 2452 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms