RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 GPR141Q7Z602 305 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 MFSD4AQ8N468 514 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 POC5Q8NA72 575 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 CD300LFQ8TDQ1 290 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 C15orf40Q8WUR7 153 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 SECTM1Q8WVN6 248 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 SNAPC3Q92966 411 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 PHB2Q99623 299 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 SPIN2AQ99865 258 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 SPIN2BQ9BPZ2 258 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 FAM103A1Q9BTL3 118 aaKnown RBP9.18□□□□□ -0.94
HDAC4-216ENST00000544989 GNB4Q9HAV0 340 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 TPSG1Q9NRR2 321 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 ZNF355PQ9NSJ1 428 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 ANAPC10Q9UM13 185 aa9.18□□□□□ -0.94
HDAC4-216ENST00000544989 C13orf42A0A1B0GVH6 325 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 LINC01619G3V211 115 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 SULT1C2O00338 296 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 SOX15O60248 233 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 IGLV2-14P01704 120 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 TRGV3P03979 118 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 SAA1P0DJI8 122 aaPredicted RBP9.17□□□□□ -0.94
HDAC4-216ENST00000544989 SMIM18P0DKX4 95 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 ZNF182P17025 639 aaPredicted RBP9.17□□□□□ -0.94
HDAC4-216ENST00000544989 NAT1P18440 290 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 MAS1LP35410 378 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 EIF4EBP1Q13541 118 aaPredicted RBP9.17□□□□□ -0.94
HDAC4-216ENST00000544989 DYRK1AQ13627 763 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 GPR107Q5VW38 600 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 DHRS11Q6UWP2 260 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 SLC25A42Q86VD7 318 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 OR5H2Q8NGV7 314 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 USMG5Q96IX5 58 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 DUX3Q96PT4 197 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 SLC5A7Q9GZV3 580 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 TAS2R8Q9NYW2 309 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 EHFQ9NZC4 300 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 ADAM30Q9UKF2 790 aa9.17□□□□□ -0.94
HDAC4-216ENST00000544989 COL7A1Q02388 2944 aa9.16□□□□□ -0.94
HDAC4-216ENST00000544989 SEC14L6B5MCN3 397 aa9.16□□□□□ -0.94
HDAC4-216ENST00000544989 MPPED1O15442 326 aa9.16□□□□□ -0.94
HDAC4-216ENST00000544989 OR2A4O95047 310 aa9.16□□□□□ -0.94
HDAC4-216ENST00000544989 HSPB1P04792 205 aaKnown RBP9.16□□□□□ -0.94
HDAC4-216ENST00000544989 S100GP29377 79 aa9.16□□□□□ -0.94
HDAC4-216ENST00000544989 DGCR2P98153 550 aa9.16□□□□□ -0.94
HDAC4-216ENST00000544989 PJVKQ0ZLH3 352 aa9.16□□□□□ -0.94
HDAC4-216ENST00000544989 TNXAQ16473 311 aa9.16□□□□□ -0.94
HDAC4-216ENST00000544989 CTF1Q16619 201 aa9.16□□□□□ -0.94
HDAC4-216ENST00000544989 FAM209BQ5JX69 171 aa9.16□□□□□ -0.94
HDAC4-216ENST00000544989 LPCAT3Q6P1A2 487 aa9.16□□□□□ -0.94
HDAC4-216ENST00000544989 CMTM1Q8IZ96 169 aa9.16□□□□□ -0.94
HDAC4-216ENST00000544989 OR4A5Q8NH83 315 aa9.16□□□□□ -0.94
HDAC4-216ENST00000544989 SRSF12Q8WXF0 261 aaKnown RBP9.16□□□□□ -0.94
HDAC4-216ENST00000544989 RHOVQ96L33 236 aa9.16□□□□□ -0.94
HDAC4-216ENST00000544989 OR2A7Q96R45 310 aa9.16□□□□□ -0.94
HDAC4-216ENST00000544989 BCL7BQ9BQE9 202 aa9.16□□□□□ -0.94
HDAC4-216ENST00000544989 MEIS3P1A6NDR6 274 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 MSGN1A6NI15 193 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 FAM25AB3EWG3 89 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 FAM25CB3EWG5 89 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 FAM25GB3EWG6 89 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 KBTBD11O94819 623 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 HPRT1P00492 218 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 PRB2P02812 416 aaPredicted RBP9.15□□□□□ -0.94
HDAC4-216ENST00000544989 EIF4EP06730 217 aaKnown RBP9.15□□□□□ -0.94
HDAC4-216ENST00000544989 FGF2P09038 288 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 PTHLHP12272 177 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 ZP3P21754 424 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 RCVRNP35243 200 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 ALDH3B2P48448 385 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 TAS2R31P59538 309 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 FXYD4P59646 89 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 RPL30P62888 115 aaKnown RBP9.15□□□□□ -0.94
HDAC4-216ENST00000544989 SSBP2P81877 361 aaPredicted RBP9.15□□□□□ -0.94
HDAC4-216ENST00000544989 ZNF429Q86V71 674 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 OR5T1Q8NG75 326 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 OR6F1Q8NGZ6 308 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 GPX8Q8TED1 209 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 MOB3AQ96BX8 217 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 MS4A10Q96PG2 267 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 OR5B12Q96R08 314 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 TINAGL1Q9GZM7 467 aaPredicted RBP9.15□□□□□ -0.94
HDAC4-216ENST00000544989 ZNF430Q9H8G1 570 aaPredicted RBP9.15□□□□□ -0.94
HDAC4-216ENST00000544989 RANGRFQ9HD47 186 aaPredicted RBP9.15□□□□□ -0.94
HDAC4-216ENST00000544989 CCL28Q9NRJ3 127 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 COA4Q9NYJ1 87 aa9.15□□□□□ -0.94
HDAC4-216ENST00000544989 TNCP24821 2201 aa9.15□□□□□ -0.95
HDAC4-216ENST00000544989 FAM223BA6NKX1 122 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 OVOL1O14753 267 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 NOL3O60936 208 aaKnown RBP9.14□□□□□ -0.95
HDAC4-216ENST00000544989 DHFRP00374 187 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 OR9G9P0C7N8 305 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 HOXD3P31249 432 aaPredicted RBP9.14□□□□□ -0.95
HDAC4-216ENST00000544989 RFX2P48378 723 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 TSPAN5P62079 268 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 OR2B11Q5JQS5 317 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 AADACL3Q5VUY0 350 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 IDO2Q6ZQW0 420 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 ZNF818PQ6ZRF7 136 aa9.14□□□□□ -0.95
HDAC4-216ENST00000544989 TMEM17Q86X19 198 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms