RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 PEF1Q9UBV8 284 aaKnown RBP9.67□□□□□ -0.86
USP28-212ENST00000544750 SLC23A1Q9UHI7 598 aa9.67□□□□□ -0.86
USP28-212ENST00000544750 ZNF230Q9UIE0 474 aaPredicted RBP9.67□□□□□ -0.86
USP28-212ENST00000544750 IGKV1D-8A0A087WSZ0 117 aa9.66□□□□□ -0.86
USP28-212ENST00000544750 OR2A4O95047 310 aa9.66□□□□□ -0.86
USP28-212ENST00000544750 IGKV1-16P04430 117 aa9.66□□□□□ -0.86
USP28-212ENST00000544750 DEFA5Q01523 94 aa9.66□□□□□ -0.86
USP28-212ENST00000544750 IGSF11Q5DX21 431 aa9.66□□□□□ -0.86
USP28-212ENST00000544750 IDNKQ5T6J7 187 aa9.66□□□□□ -0.86
USP28-212ENST00000544750 Q6ZS49 121 aa9.66□□□□□ -0.86
USP28-212ENST00000544750 OR4A4PQ8NGN8 299 aa9.66□□□□□ -0.86
USP28-212ENST00000544750 ABHD14BQ96IU4 210 aa9.66□□□□□ -0.86
USP28-212ENST00000544750 TINAGL1Q9GZM7 467 aaPredicted RBP9.66□□□□□ -0.86
USP28-212ENST00000544750 C11orf54Q9H0W9 315 aaPredicted RBP9.66□□□□□ -0.86
USP28-212ENST00000544750 ZNF355PQ9NSJ1 428 aa9.66□□□□□ -0.86
USP28-212ENST00000544750 ETV7Q9Y603 341 aa9.66□□□□□ -0.86
USP28-212ENST00000544750 TMEM235A6NFC5 223 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 H7C2Y5 167 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 FABP7O15540 132 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 SSX5O60225 188 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 TPPPO94811 219 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 GSTT2P0CG29 244 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 GSTT2BP0CG30 244 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 AADACP22760 399 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 ZBTB25P24278 435 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 CEACAM6P40199 344 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 NCS1P62166 190 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 CD300EQ496F6 205 aaPredicted RBP9.65□□□□□ -0.86
USP28-212ENST00000544750 CDNFQ49AH0 187 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 HACD4Q5VWC8 232 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 GRPEL2Q8TAA5 225 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 NUDCD2Q8WVJ2 157 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 DDB2Q92466 427 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 ST6GALNAC5Q9BVH7 336 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 NAA50Q9GZZ1 169 aaKnown RBP9.65□□□□□ -0.86
USP28-212ENST00000544750 SRD5A3Q9H8P0 318 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 SPATA2Q9UM82 520 aa9.65□□□□□ -0.86
USP28-212ENST00000544750 TRBV6-7A0A0A0MS04 114 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 OR11H12B2RN74 326 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 CNIH1O95406 144 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 DIRAS3O95661 229 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 IGLV2-23P01705 113 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 CRYGBP07316 175 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 DTYMKP23919 212 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 LINC00205P59089 165 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 VBP1P61758 197 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 PJVKQ0ZLH3 352 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 ARFRP1Q13795 201 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 TATDN3Q17R31 274 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 RPEL1Q2QD12 228 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 RPP25LQ8N5L8 163 aaKnown RBP9.64□□□□□ -0.87
USP28-212ENST00000544750 ZNF383Q8NA42 475 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 BVESQ8NE79 360 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 USMG5Q96IX5 58 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 TMEM68Q96MH6 324 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 TSNAXQ99598 290 aaKnown RBP9.64□□□□□ -0.87
USP28-212ENST00000544750 OVOL2Q9BRP0 275 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 ZC4H2Q9NQZ6 224 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 SLC2A8Q9NY64 477 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 RDH8Q9NYR8 311 aa9.64□□□□□ -0.87
USP28-212ENST00000544750 BMPR1BO00238 502 aa9.63□□□□□ -0.87
USP28-212ENST00000544750 BET1O15155 118 aa9.63□□□□□ -0.87
USP28-212ENST00000544750 TMEM127O75204 238 aa9.63□□□□□ -0.87
USP28-212ENST00000544750 SCGNO76038 276 aa9.63□□□□□ -0.87
USP28-212ENST00000544750 ALDH3B2P48448 385 aa9.63□□□□□ -0.87
USP28-212ENST00000544750 RPS16P62249 146 aaKnown RBP9.63□□□□□ -0.87
USP28-212ENST00000544750 MRPS15P82914 257 aaKnown RBP9.63□□□□□ -0.87
USP28-212ENST00000544750 EWSR1Q01844 656 aaKnown RBP eCLIP9.63□□□□□ -0.87
USP28-212ENST00000544750 ARL6IP1Q15041 203 aa9.63□□□□□ -0.87
USP28-212ENST00000544750 CTF1Q16619 201 aa9.63□□□□□ -0.87
USP28-212ENST00000544750 MRGPRG-AS1Q2M3A8 158 aa9.63□□□□□ -0.87
USP28-212ENST00000544750 DEFB114Q30KQ6 69 aa9.63□□□□□ -0.87
USP28-212ENST00000544750 DRAXINQ8NBI3 349 aaPredicted RBP9.63□□□□□ -0.87
USP28-212ENST00000544750 EDARADDQ8WWZ3 215 aa9.63□□□□□ -0.87
USP28-212ENST00000544750 SLC25A46Q96AG3 418 aa9.63□□□□□ -0.87
USP28-212ENST00000544750 C5orf30Q96GV9 206 aa9.63□□□□□ -0.87
USP28-212ENST00000544750 MRPS26Q9BYN8 205 aaKnown RBP9.63□□□□□ -0.87
USP28-212ENST00000544750 PEMTQ9UBM1 199 aa9.63□□□□□ -0.87
USP28-212ENST00000544750 A0A0A6YYH2 397 aa9.62□□□□□ -0.87
USP28-212ENST00000544750 NUPR2A6NF83 97 aa9.62□□□□□ -0.87
USP28-212ENST00000544750 A6NJ64 397 aa9.62□□□□□ -0.87
USP28-212ENST00000544750 GABARAPO95166 117 aa9.62□□□□□ -0.87
USP28-212ENST00000544750 SERPINB10P48595 397 aa9.62□□□□□ -0.87
USP28-212ENST00000544750 PDPNQ86YL7 162 aa9.62□□□□□ -0.87
USP28-212ENST00000544750 CROCCP3Q8IVE0 287 aa9.62□□□□□ -0.87
USP28-212ENST00000544750 H1FOOQ8IZA3 346 aaPredicted RBP9.62□□□□□ -0.87
USP28-212ENST00000544750 SNAPC3Q92966 411 aa9.62□□□□□ -0.87
USP28-212ENST00000544750 TRAV18A0A075B6X5 111 aa9.61□□□□□ -0.87
USP28-212ENST00000544750 PTHLHP12272 177 aa9.61□□□□□ -0.87
USP28-212ENST00000544750 EDN2P20800 178 aa9.61□□□□□ -0.87
USP28-212ENST00000544750 TALDO1P37837 337 aa9.61□□□□□ -0.87
USP28-212ENST00000544750 KIR2DS2P43631 304 aa9.61□□□□□ -0.87
USP28-212ENST00000544750 PMS2P11Q13670 270 aa9.61□□□□□ -0.87
USP28-212ENST00000544750 CEMP1Q6PRD7 247 aaPredicted RBP9.61□□□□□ -0.87
USP28-212ENST00000544750 ADAD2Q8NCV1 583 aaKnown RBP9.61□□□□□ -0.87
USP28-212ENST00000544750 OR10J5Q8NHC4 309 aa9.61□□□□□ -0.87
USP28-212ENST00000544750 DCSTAMPQ9H295 470 aa9.61□□□□□ -0.87
USP28-212ENST00000544750 AUNIPQ9H7T9 357 aa9.61□□□□□ -0.87
USP28-212ENST00000544750 DMRT1Q9Y5R6 373 aa9.61□□□□□ -0.87
USP28-212ENST00000544750 DNAH17Q9UFH2 4485 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms